Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637885
Identifier: 121637885
GI number: 121637885
Start: 2225487
End: 2226239
Strand: Direct
Name: 121637885
Synonym: BCG_2018
Alternate gene names: NA
Gene position: 2225487-2226239 (Clockwise)
Preceding gene: 121637884
Following gene: 121637886
Centisome position: 50.87
GC content: 61.09
Gene sequence:
>753_bases GTGCACCATAACCGCGATGTCGACTTGGCGCTTGTCGAGCGACCCAGCTCGGGATACGTCTACACAACGGGTTGGCGACT GGCCACAACGGACATCGACGAGCACCAACAACTGCGCCTCGACGGTGTCGCGCGCTATATCCAAGAGGTCGGTGCCGAGC ATCTCGCCGATGCCCAATTGGCAGAGGTCCATCCCCATTGGATTGTCCTGCGCACGGTCATCGATGTCATCAACCCGATT GAGCTACCCAGCGACATCACCTTTCACCGGTGGTGCGCAGCGCTTTCCACCAGGTGGTGCAGCATGCGTGTGCAGCTGCA AGGATCCGCCGGCGGCCACATCGAAACCGAAGGGTTCTGGATCTGCGTGAACAAAGACACCCTGACGCCGTCCCGTCTCA CCGATGACTGCATCGCACGTTTCGGCAGCACCACCGAAAACCACCGGCTCAAGTGGCGCCCATGGCTCACCGGGCCGAAC ATCGATGGTACCGAGACACCATTTCCCTTGCGTCGCACGGATATTGACCCGTTCGAGCATGTCAACAACACCATCTACTG GCACGGTGTGCACGAAATACTCTGCCAGATACCCACCCTGACGGCACCCTACCGCGCCGTGCTCGAGTACCGCAGCCCCA TCAAGTCCGGCGAACCGCTGACCATTCGTTACGAGCAGCACGACGACGTCGTGCGCATGCACTTCGTCGTCGGCGACGAC GTGCGCGCGGCAGCGCTGCTGCGCAGGCTATAA
Upstream 100 bases:
>100_bases GGTGTCGATGTTCCAAAAGAGGTTGGGCACCGCCGGCGACCAGCTAGCGAAGCTGCTCGACGCCGCCACCGCAACAACCG AACAACGCTAAGGATCGGCC
Downstream 100 bases:
>100_bases CCGTCTGGACGAATCGGCGGTATGCCGACCACCATGAACCAAGGTCCGCAACGCATCGAAGCACGAGGAGAATCCATGTC TGGACGGTTGATCGGAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MHHNRDVDLALVERPSSGYVYTTGWRLATTDIDEHQQLRLDGVARYIQEVGAEHLADAQLAEVHPHWIVLRTVIDVINPI ELPSDITFHRWCAALSTRWCSMRVQLQGSAGGHIETEGFWICVNKDTLTPSRLTDDCIARFGSTTENHRLKWRPWLTGPN IDGTETPFPLRRTDIDPFEHVNNTIYWHGVHEILCQIPTLTAPYRAVLEYRSPIKSGEPLTIRYEQHDDVVRMHFVVGDD VRAAALLRRL
Sequences:
>Translated_250_residues MHHNRDVDLALVERPSSGYVYTTGWRLATTDIDEHQQLRLDGVARYIQEVGAEHLADAQLAEVHPHWIVLRTVIDVINPI ELPSDITFHRWCAALSTRWCSMRVQLQGSAGGHIETEGFWICVNKDTLTPSRLTDDCIARFGSTTENHRLKWRPWLTGPN IDGTETPFPLRRTDIDPFEHVNNTIYWHGVHEILCQIPTLTAPYRAVLEYRSPIKSGEPLTIRYEQHDDVVRMHFVVGDD VRAAALLRRL >Mature_250_residues MHHNRDVDLALVERPSSGYVYTTGWRLATTDIDEHQQLRLDGVARYIQEVGAEHLADAQLAEVHPHWIVLRTVIDVINPI ELPSDITFHRWCAALSTRWCSMRVQLQGSAGGHIETEGFWICVNKDTLTPSRLTDDCIARFGSTTENHRLKWRPWLTGPN IDGTETPFPLRRTDIDPFEHVNNTIYWHGVHEILCQIPTLTAPYRAVLEYRSPIKSGEPLTIRYEQHDDVVRMHFVVGDD VRAAALLRRL
Specific function: Unknown
COG id: COG3884
COG function: function code I; Acyl-ACP thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002864 [H]
Pfam domain/function: PF01643 Acyl-ACP_TE [H]
EC number: NA
Molecular weight: Translated: 28715; Mature: 28715
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHNRDVDLALVERPSSGYVYTTGWRLATTDIDEHQQLRLDGVARYIQEVGAEHLADAQL CCCCCCCEEEEEECCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHHCCCHH AEVHPHWIVLRTVIDVINPIELPSDITFHRWCAALSTRWCSMRVQLQGSAGGHIETEGFW HHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCCEEECCCEE ICVNKDTLTPSRLTDDCIARFGSTTENHRLKWRPWLTGPNIDGTETPFPLRRTDIDPFEH EEEECCCCCHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH VNNTIYWHGVHEILCQIPTLTAPYRAVLEYRSPIKSGEPLTIRYEQHDDVVRMHFVVGDD HCCCEEEECHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCC VRAAALLRRL HHHHHHHHCC >Mature Secondary Structure MHHNRDVDLALVERPSSGYVYTTGWRLATTDIDEHQQLRLDGVARYIQEVGAEHLADAQL CCCCCCCEEEEEECCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHHCCCHH AEVHPHWIVLRTVIDVINPIELPSDITFHRWCAALSTRWCSMRVQLQGSAGGHIETEGFW HHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCCEEECCCEE ICVNKDTLTPSRLTDDCIARFGSTTENHRLKWRPWLTGPNIDGTETPFPLRRTDIDPFEH EEEECCCCCHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH VNNTIYWHGVHEILCQIPTLTAPYRAVLEYRSPIKSGEPLTIRYEQHDDVVRMHFVVGDD HCCCEEEECHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCC VRAAALLRRL HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]