Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637884
Identifier: 121637884
GI number: 121637884
Start: 2223864
End: 2225477
Strand: Direct
Name: 121637884
Synonym: BCG_2017
Alternate gene names: NA
Gene position: 2223864-2225477 (Clockwise)
Preceding gene: 121637881
Following gene: 121637885
Centisome position: 50.84
GC content: 62.27
Gene sequence:
>1614_bases ATGCGTCCAGGGTTTGTGGGTTTGGGGTTTGGTCAGTGGCCGGTCTACGTTGTTCGCTGGCCTAAACTCCACCTGACGCC GCGGCAGCGAAAGCGTGTCTTGCATCGGCGACGATTGCTCACCGATCGCCCGATTTCGTTGTCACAAATTCCAATCCGCA CAGGAGGGCCCATGAACGACCCGTGGCCCAGGCCAACGCAAGGGCCGGCGAAAACCATCGAAACCGACTACCTGGTGATA GGTGCCGGAGCGATGGGAATGGCATTCACGGATACCCTCATCACCGAGTCCGGTGCGCGCGTCGTCATGATCGACCGCGC ATGTCAACCTGGTGGACATTGGACCACCGCCTACCCGTTCGTGCGGCTACACCAGCCATCGGCCTATTACGGCGTCAACT CAAGGGCACTAGGCAACAACACCATTGACCTCGTCGGTTGGAACCAGGGACTGAACGAACTGGCACCAGTCGGCGAGATA TGCGCCTACTTCGATGCTGTATTGCAGCAGCAACTGCTCCCCACCGGGCGGGTTGACTACTTCCCGATGAGCGAATACCT GGGCGACGGCCGGTTCCGGACACTGGCAGGCACCGAATACGTCGTCACCGTCAATCGGCGCATCGTCGATGCCACCTACC TGCGTGCCGTCGTACCGTCGATGCGGCCGGCGCCGTACTCGGTTGCACCCGGCGTCGACTGCGTCGCTCCAAACGAACTG CCCAAACTCGGCACCCGGGATCGCTACGTGGTCGTCGGTGCCGGCAAGACCGGCATGGACGTCTGCCTATGGTTGCTCCG AAACGACGTCTGCCCTGACAAGCTGACCTGGATCATGCCGCGTGATTCCTGGCTGATCGACCGAGCGACGCTGCAGCCCG GGCCCACATTCGTCAGGCAGTTCAGGGAAAGCTACGGTGCGACTCTCGAGGCCATCGGGGCCGCGACCTCGACCGACGAT CTGTTCGACCGACTAGAGACCGCCGGAACCCTGCTGCGCATCGACCCCTCGGTGCGTCCGAGCATGTATCGCTGCGCCAC TGTGTCGCACCTCGAACTCGAGCAGCTGCGCCGTATCCGCGACATCGTCAGGATGGGCCACGTCCAACGCATCGAGCCCA CCACGATAGTGCTCGACGGCGGATCGGTTCCCGCCACACCCACGGCCCTCTATATTGACTGCACCGCCGATGGAGCACCA CAACGTCCAGCCAAGCCGGTTTTCGACGCAGACCACCTAACCCTGCAAGCCGTGCGCGGATGCCAACAGGTGTTCAGCGC CGCGTTTATCGCGCACGTCGAATTCGCCTACGAGGACGACGCGGTGAAAAACGAACTCTGTACCCCGATTCCACACCCGG ACTGCGATCTGGACTGGATGCGTCTGATGCACTCCGATCTAGGCAACTTTCAGCGCTGGTTAAACGACCCCGATCTGACG GACTGGCTGAGCTCGGCGCGGTTGAACTTGCTCGCCGACCTGCTGCCGCCGTTGTCTCACAAGCCGCGGGTGCGCGAGCG GGTGGTGTCGATGTTCCAAAAGAGGTTGGGCACCGCCGGCGACCAGCTAGCGAAGCTGCTCGACGCCGCCACCGCAACAA CCGAACAACGCTAA
Upstream 100 bases:
>100_bases AATATCGCGTGGGTCTAGCGGGCGTCTCATGCCTCGATAAGGCTACGGCATCCGATATCGGTATACGATATCTACCCGGA ATTTGACGCCCGAGACCCGC
Downstream 100 bases:
>100_bases GGATCGGCCGTGCACCATAACCGCGATGTCGACTTGGCGCTTGTCGAGCGACCCAGCTCGGGATACGTCTACACAACGGG TTGGCGACTGGCCACAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MRPGFVGLGFGQWPVYVVRWPKLHLTPRQRKRVLHRRRLLTDRPISLSQIPIRTGGPMNDPWPRPTQGPAKTIETDYLVI GAGAMGMAFTDTLITESGARVVMIDRACQPGGHWTTAYPFVRLHQPSAYYGVNSRALGNNTIDLVGWNQGLNELAPVGEI CAYFDAVLQQQLLPTGRVDYFPMSEYLGDGRFRTLAGTEYVVTVNRRIVDATYLRAVVPSMRPAPYSVAPGVDCVAPNEL PKLGTRDRYVVVGAGKTGMDVCLWLLRNDVCPDKLTWIMPRDSWLIDRATLQPGPTFVRQFRESYGATLEAIGAATSTDD LFDRLETAGTLLRIDPSVRPSMYRCATVSHLELEQLRRIRDIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAP QRPAKPVFDADHLTLQAVRGCQQVFSAAFIAHVEFAYEDDAVKNELCTPIPHPDCDLDWMRLMHSDLGNFQRWLNDPDLT DWLSSARLNLLADLLPPLSHKPRVRERVVSMFQKRLGTAGDQLAKLLDAATATTEQR
Sequences:
>Translated_537_residues MRPGFVGLGFGQWPVYVVRWPKLHLTPRQRKRVLHRRRLLTDRPISLSQIPIRTGGPMNDPWPRPTQGPAKTIETDYLVI GAGAMGMAFTDTLITESGARVVMIDRACQPGGHWTTAYPFVRLHQPSAYYGVNSRALGNNTIDLVGWNQGLNELAPVGEI CAYFDAVLQQQLLPTGRVDYFPMSEYLGDGRFRTLAGTEYVVTVNRRIVDATYLRAVVPSMRPAPYSVAPGVDCVAPNEL PKLGTRDRYVVVGAGKTGMDVCLWLLRNDVCPDKLTWIMPRDSWLIDRATLQPGPTFVRQFRESYGATLEAIGAATSTDD LFDRLETAGTLLRIDPSVRPSMYRCATVSHLELEQLRRIRDIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAP QRPAKPVFDADHLTLQAVRGCQQVFSAAFIAHVEFAYEDDAVKNELCTPIPHPDCDLDWMRLMHSDLGNFQRWLNDPDLT DWLSSARLNLLADLLPPLSHKPRVRERVVSMFQKRLGTAGDQLAKLLDAATATTEQR >Mature_537_residues MRPGFVGLGFGQWPVYVVRWPKLHLTPRQRKRVLHRRRLLTDRPISLSQIPIRTGGPMNDPWPRPTQGPAKTIETDYLVI GAGAMGMAFTDTLITESGARVVMIDRACQPGGHWTTAYPFVRLHQPSAYYGVNSRALGNNTIDLVGWNQGLNELAPVGEI CAYFDAVLQQQLLPTGRVDYFPMSEYLGDGRFRTLAGTEYVVTVNRRIVDATYLRAVVPSMRPAPYSVAPGVDCVAPNEL PKLGTRDRYVVVGAGKTGMDVCLWLLRNDVCPDKLTWIMPRDSWLIDRATLQPGPTFVRQFRESYGATLEAIGAATSTDD LFDRLETAGTLLRIDPSVRPSMYRCATVSHLELEQLRRIRDIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAP QRPAKPVFDADHLTLQAVRGCQQVFSAAFIAHVEFAYEDDAVKNELCTPIPHPDCDLDWMRLMHSDLGNFQRWLNDPDLT DWLSSARLNLLADLLPPLSHKPRVRERVVSMFQKRLGTAGDQLAKLLDAATATTEQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2000_MYCTU (P64917)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: F70758 - RefSeq: NP_216516.1 - RefSeq: NP_336519.1 - ProteinModelPortal: P64917 - EnsemblBacteria: EBMYCT00000003891 - EnsemblBacteria: EBMYCT00000072128 - GeneID: 888864 - GeneID: 923384 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2056 - KEGG: mtu:Rv2000 - TIGR: MT2056 - TubercuList: Rv2000 - GeneTree: EBGT00050000018072 - HOGENOM: HBG567890 - OMA: HQPSAFY - ProtClustDB: CLSK791552 - GO: GO:0005829
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59895; Mature: 59895
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPGFVGLGFGQWPVYVVRWPKLHLTPRQRKRVLHRRRLLTDRPISLSQIPIRTGGPMND CCCCEEECCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC PWPRPTQGPAKTIETDYLVIGAGAMGMAFTDTLITESGARVVMIDRACQPGGHWTTAYPF CCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCE VRLHQPSAYYGVNSRALGNNTIDLVGWNQGLNELAPVGEICAYFDAVLQQQLLPTGRVDY EEEECCCCEECCCCCCCCCCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC FPMSEYLGDGRFRTLAGTEYVVTVNRRIVDATYLRAVVPSMRPAPYSVAPGVDCVAPNEL CCHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PKLGTRDRYVVVGAGKTGMDVCLWLLRNDVCPDKLTWIMPRDSWLIDRATLQPGPTFVRQ CCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHH FRESYGATLEAIGAATSTDDLFDRLETAGTLLRIDPSVRPSMYRCATVSHLELEQLRRIR HHHHHCCEEHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH DIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAPQRPAKPVFDADHLTLQAVRG HHHHHCCCEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH CQQVFSAAFIAHVEFAYEDDAVKNELCTPIPHPDCDLDWMRLMHSDLGNFQRWLNDPDLT HHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH DWLSSARLNLLADLLPPLSHKPRVRERVVSMFQKRLGTAGDQLAKLLDAATATTEQR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRPGFVGLGFGQWPVYVVRWPKLHLTPRQRKRVLHRRRLLTDRPISLSQIPIRTGGPMND CCCCEEECCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC PWPRPTQGPAKTIETDYLVIGAGAMGMAFTDTLITESGARVVMIDRACQPGGHWTTAYPF CCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCE VRLHQPSAYYGVNSRALGNNTIDLVGWNQGLNELAPVGEICAYFDAVLQQQLLPTGRVDY EEEECCCCEECCCCCCCCCCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC FPMSEYLGDGRFRTLAGTEYVVTVNRRIVDATYLRAVVPSMRPAPYSVAPGVDCVAPNEL CCHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PKLGTRDRYVVVGAGKTGMDVCLWLLRNDVCPDKLTWIMPRDSWLIDRATLQPGPTFVRQ CCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHH FRESYGATLEAIGAATSTDDLFDRLETAGTLLRIDPSVRPSMYRCATVSHLELEQLRRIR HHHHHCCEEHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH DIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAPQRPAKPVFDADHLTLQAVRG HHHHHCCCEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH CQQVFSAAFIAHVEFAYEDDAVKNELCTPIPHPDCDLDWMRLMHSDLGNFQRWLNDPDLT HHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH DWLSSARLNLLADLLPPLSHKPRVRERVVSMFQKRLGTAGDQLAKLLDAATATTEQR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036