Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is yqjF [H]
Identifier: 121637832
GI number: 121637832
Start: 2181833
End: 2182606
Strand: Direct
Name: yqjF [H]
Synonym: BCG_1966
Alternate gene names: 121637832
Gene position: 2181833-2182606 (Clockwise)
Preceding gene: 121637830
Following gene: 121637837
Centisome position: 49.88
GC content: 65.5
Gene sequence:
>774_bases GTGACCGCCATACCCGGCCCGTCGGGCGCCGAACCCGGTGAGAGCCGCGCGCTCGCGGGTTACCCGGTGACGCCGCCGGC GCTGCCCCGCCCGGTGATCTTCGACCAGCGCTGGACTGACCTGACCTTCATCCACTGGCCGGTGCTGCCGGAGAGCGTGG CAGGCAGCTACCCGCCCGGGACTCGCCCCGATGTCTTCGCCGATGGGATGACTTACGTGGGTCTGGTCCCGTTTCGCATG AGCAGCACCAAACTCGGCACCGCACTGCCGATCCCGTATGTCGGCACCTTCCCGGAGACCAATGTCCGGTTGTACTCCAT TGATAACGCCGGCCGGCACGGGGTGCTTTTCCGGTCGCTGGAAACAGCTCGACTGACTGTCGTACCGCTCACGCGGATAG GACTCGGCATCCCGTACGCCTGGTCGAGGATGCGGATGATGCGCTCTGGTAAGCACATTACGTATCACAGTGTCCGCCGC TGGCCACGGCGCGGACTGCGCAGCCTATTGACGATCACCATCGGTGACCTGGTTGAGCCGACGCCGCTGGAAGTCTGGCT TACCGCACGGTGGGGTGCGCATACCCGCAAGGCTGGCCGGACTTGGTGGGTGCCGAACGAGCATAAGCCGTGGCCGTTGC GGGCCGCGGAGATCGCCGAGTTGAACGACGAGTTGATCGACGCAAGTGGCGTGCAACCCACTGGCGATCGGTTGCGCGCC CTGTTTTCACCGGGTGTGCATGCCCGATTCGGCCGTCCGTGTGTCGTTCAGTGA
Upstream 100 bases:
>100_bases CGTAGCCGGCGCACCGACGACGGGCGTGGCCATGAATGCTTGATGGCCGAGTCGTAGGCGACCAGCGCAAGGGAGCCAAA CCGCATGTCAGGATGGTGTG
Downstream 100 bases:
>100_bases CGTTTAGGGGCAGGTGTATCCACCATCAATCACGATGTCGGAACCGGTCATATAGCTGGAAGCCTCGCTAGCCAGATACA GGTAGAGGCCAGCGAGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTAIPGPSGAEPGESRALAGYPVTPPALPRPVIFDQRWTDLTFIHWPVLPESVAGSYPPGTRPDVFADGMTYVGLVPFRM SSTKLGTALPIPYVGTFPETNVRLYSIDNAGRHGVLFRSLETARLTVVPLTRIGLGIPYAWSRMRMMRSGKHITYHSVRR WPRRGLRSLLTITIGDLVEPTPLEVWLTARWGAHTRKAGRTWWVPNEHKPWPLRAAEIAELNDELIDASGVQPTGDRLRA LFSPGVHARFGRPCVVQ
Sequences:
>Translated_257_residues MTAIPGPSGAEPGESRALAGYPVTPPALPRPVIFDQRWTDLTFIHWPVLPESVAGSYPPGTRPDVFADGMTYVGLVPFRM SSTKLGTALPIPYVGTFPETNVRLYSIDNAGRHGVLFRSLETARLTVVPLTRIGLGIPYAWSRMRMMRSGKHITYHSVRR WPRRGLRSLLTITIGDLVEPTPLEVWLTARWGAHTRKAGRTWWVPNEHKPWPLRAAEIAELNDELIDASGVQPTGDRLRA LFSPGVHARFGRPCVVQ >Mature_256_residues TAIPGPSGAEPGESRALAGYPVTPPALPRPVIFDQRWTDLTFIHWPVLPESVAGSYPPGTRPDVFADGMTYVGLVPFRMS STKLGTALPIPYVGTFPETNVRLYSIDNAGRHGVLFRSLETARLTVVPLTRIGLGIPYAWSRMRMMRSGKHITYHSVRRW PRRGLRSLLTITIGDLVEPTPLEVWLTARWGAHTRKAGRTWWVPNEHKPWPLRAAEIAELNDELIDASGVQPTGDRLRAL FSPGVHARFGRPCVVQ
Specific function: Unknown
COG id: COG3361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018644 [H]
Pfam domain/function: PF09844 DUF2071 [H]
EC number: NA
Molecular weight: Translated: 28586; Mature: 28455
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIPGPSGAEPGESRALAGYPVTPPALPRPVIFDQRWTDLTFIHWPVLPESVAGSYPPG CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHCCCCCCC TRPDVFADGMTYVGLVPFRMSSTKLGTALPIPYVGTFPETNVRLYSIDNAGRHGVLFRSL CCCCEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEC ETARLTVVPLTRIGLGIPYAWSRMRMMRSGKHITYHSVRRWPRRGLRSLLTITIGDLVEP CCEEEEEEEHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC TPLEVWLTARWGAHTRKAGRTWWVPNEHKPWPLRAAEIAELNDELIDASGVQPTGDRLRA CCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH LFSPGVHARFGRPCVVQ HHCCCCCHHCCCCCCCC >Mature Secondary Structure TAIPGPSGAEPGESRALAGYPVTPPALPRPVIFDQRWTDLTFIHWPVLPESVAGSYPPG CCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHCCCCCCC TRPDVFADGMTYVGLVPFRMSSTKLGTALPIPYVGTFPETNVRLYSIDNAGRHGVLFRSL CCCCEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEC ETARLTVVPLTRIGLGIPYAWSRMRMMRSGKHITYHSVRRWPRRGLRSLLTITIGDLVEP CCEEEEEEEHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC TPLEVWLTARWGAHTRKAGRTWWVPNEHKPWPLRAAEIAELNDELIDASGVQPTGDRLRA CCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH LFSPGVHARFGRPCVVQ HHCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10568751 [H]