Click here to switch to the map view.

The map label for this gene is lipD [C]

Identifier: 121637828

GI number: 121637828

Start: 2177333

End: 2178673

Strand: Direct

Name: lipD [C]

Synonym: BCG_1962

Alternate gene names: 121637828

Gene position: 2177333-2178673 (Clockwise)

Preceding gene: 121637827

Following gene: 121637830

Centisome position: 49.77

GC content: 62.94

Gene sequence:

>1341_bases
TTGGATGTAGCGGGGCTACCGCGGTTGGCCGCCGGTACCCAGGCTGCAATCATTCACGGTATGGCGCAACCACCGTCACT
CCTCACAACTGACAATGGCCTACCCTTCGGCGTGCAAGGTGCCTGCGACTCCCGTTTCACCGGAGTCATCCGTGCCTTTG
CTGGGCTGTACCCCGGCCGCAAGTTCGGGGGTGGGGCACTGTCGGTTTATATCGACGATCGCCAGGTCGTCGATGTCTGG
ACGGGGTGGTCCGATCGGCAGGGCAAAGTACCCTGGACGGCCGATACCGGGGCAATGGTGTTCTCCGCGACCAAAGGGTT
GGCCGCAACGGTGATTCACCGTTTGGTCGATCGCGGCCTTTTGTCCTACGACGCGCCGGTCGCGGAGTACTGGCCCGAGT
TCGGAGCTAACGGCAAGTCTGAGGTCACCGTCAGCGATGTGTTGCGACATCGGTCCGGACTGGCGCACCTCAAGGGGGTG
GACAAGGACGAGGTCATGGACCACCTCCTGATGGAGCAGAAGTTGGCGGCTGCGCCGCTAAACCGCCAGCACGGGAAGTT
GGCTTACCATGCGGTGACTTACGGATGGCTGCTGTCCGGCTTGGCTCGTGCAGTGACCGGCAAAGGCATGCGTGAACTGT
TCCGCGAAGAACTCGCTCGCCCGCTGAACACCGATGGTATTCATCTCGGCCGGCCACCGGCCGACTCGCCTACCAAGGCG
GCACAGACACTTCTGCCCCAAGCCAAGGTCCCCACCCCACTGCTCGATTTCATCGCACCAAAGGTTGCGGGGCTGTCGTT
CTCCGGGCTGCTCGGCGCCGTCTACTTCCCGGGCATCCTGTCGTTGCTGCAAGACGATATGCCGTTCCTCGACGGTGAGG
TTCCGGCGGTCAACGGCGTTGTGACCGCGCGCGCCCTGGCCAAGACGTATGGGGCGTTGGCCAATGACGGTGTGATCGAC
GGCACCCGACTGCTGTCGTCGCAGGCGGTACGTGGATTGACGGGGAAGTCCGAGCTATGGCCGGACCTTAATCTCGGTCT
TCCTTTTACCTACCACCAGGGTTACCAATCGTCTCCGGTGCCTGGGCTGCTGGAGGGGTACGGCCACATCGGGCTCGGTG
GCACGATCGGATGGGCCGACCCGGAGACCGGCAGCGCATTCGGATATGTGCATAACCGCTTGCTGACGCTACTGTTGTTC
GATATTGGCTCGTTCGCAGGGCTGGCTGCGCTGCTGAACAGCGCCGTCGTGGCAGCACGTCGCGATGACCCCCTGGAAGT
GCCGCATTTCGGTGCGCCCTATAGCGAACCGCGTCATGAGCAGGCGGCCTCGGGTGCATAA

Upstream 100 bases:

>100_bases
CGGCATTCCACATCAGCAGTGACCGACGGACTTCGGTGGCCATCAGCTGCAACACCGACAAGCCGGACCCGGTGGCCATG
GCCGATGCGCTGGGGCGCCT

Downstream 100 bases:

>100_bases
CTGCTCCCGTTATGCCGCGAGCGCGAGCCCGACGGGCTAGAACTCGTAAACGAGTAGCCAGACGAGAGCGACGGCCGCCA
AGAACAGACCAACCAGGATA

Product: putative lipase lipD

Products: NA

Alternate protein names: Esterase; Carboxylesterase; Beta-Lactamase Class C; Esterase/Lipase LipP; Esterase A; Lactone Hydrolase; Lipase LipE; Beta-Lactamase Protein; Esterase/Lipase/Beta-Lactamase; Esterase LipL; Lipase LipD; Lipase/Esterase/Beta-Lactamase; Beta-Lactamase Family Protein; Hydrolase; Esterase/Lipase; Carboxylesterase EstC; Serine Hydrolase; Beta-Lactamase Family; Fusion Of Enoyl-CoA Hydratase; Beta-Lactamase-Like Protein

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVIRAFAGLYPGRKFGGGALSVYIDDRQVVDVW
TGWSDRQGKVPWTADTGAMVFSATKGLAATVIHRLVDRGLLSYDAPVAEYWPEFGANGKSEVTVSDVLRHRSGLAHLKGV
DKDEVMDHLLMEQKLAAAPLNRQHGKLAYHAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTKA
AQTLLPQAKVPTPLLDFIAPKVAGLSFSGLLGAVYFPGILSLLQDDMPFLDGEVPAVNGVVTARALAKTYGALANDGVID
GTRLLSSQAVRGLTGKSELWPDLNLGLPFTYHQGYQSSPVPGLLEGYGHIGLGGTIGWADPETGSAFGYVHNRLLTLLLF
DIGSFAGLAALLNSAVVAARRDDPLEVPHFGAPYSEPRHEQAASGA

Sequences:

>Translated_446_residues
MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVIRAFAGLYPGRKFGGGALSVYIDDRQVVDVW
TGWSDRQGKVPWTADTGAMVFSATKGLAATVIHRLVDRGLLSYDAPVAEYWPEFGANGKSEVTVSDVLRHRSGLAHLKGV
DKDEVMDHLLMEQKLAAAPLNRQHGKLAYHAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTKA
AQTLLPQAKVPTPLLDFIAPKVAGLSFSGLLGAVYFPGILSLLQDDMPFLDGEVPAVNGVVTARALAKTYGALANDGVID
GTRLLSSQAVRGLTGKSELWPDLNLGLPFTYHQGYQSSPVPGLLEGYGHIGLGGTIGWADPETGSAFGYVHNRLLTLLLF
DIGSFAGLAALLNSAVVAARRDDPLEVPHFGAPYSEPRHEQAASGA
>Mature_446_residues
MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVIRAFAGLYPGRKFGGGALSVYIDDRQVVDVW
TGWSDRQGKVPWTADTGAMVFSATKGLAATVIHRLVDRGLLSYDAPVAEYWPEFGANGKSEVTVSDVLRHRSGLAHLKGV
DKDEVMDHLLMEQKLAAAPLNRQHGKLAYHAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTKA
AQTLLPQAKVPTPLLDFIAPKVAGLSFSGLLGAVYFPGILSLLQDDMPFLDGEVPAVNGVVTARALAKTYGALANDGVID
GTRLLSSQAVRGLTGKSELWPDLNLGLPFTYHQGYQSSPVPGLLEGYGHIGLGGTIGWADPETGSAFGYVHNRLLTLLLF
DIGSFAGLAALLNSAVVAARRDDPLEVPHFGAPYSEPRHEQAASGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17538474, Length=412, Percent_Identity=30.0970873786408, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71983659, Length=374, Percent_Identity=30.4812834224599, Blast_Score=137, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI17535177, Length=383, Percent_Identity=30.5483028720627, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17538001, Length=351, Percent_Identity=31.0541310541311, Blast_Score=134, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI71983666, Length=306, Percent_Identity=32.3529411764706, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17535191, Length=394, Percent_Identity=28.4263959390863, Blast_Score=124, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI71990590, Length=375, Percent_Identity=24.2666666666667, Blast_Score=111, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47227; Mature: 47227

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVIRAFAGLYPGR
CCCCCCCCHHCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
KFGGGALSVYIDDRQVVDVWTGWSDRQGKVPWTADTGAMVFSATKGLAATVIHRLVDRGL
CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
LSYDAPVAEYWPEFGANGKSEVTVSDVLRHRSGLAHLKGVDKDEVMDHLLMEQKLAAAPL
HHCCCCHHHHHHHHCCCCCCCEEHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCC
NRQHGKLAYHAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTKA
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHH
AQTLLPQAKVPTPLLDFIAPKVAGLSFSGLLGAVYFPGILSLLQDDMPFLDGEVPAVNGV
HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
VTARALAKTYGALANDGVIDGTRLLSSQAVRGLTGKSELWPDLNLGLPFTYHQGYQSSPV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
PGLLEGYGHIGLGGTIGWADPETGSAFGYVHNRLLTLLLFDIGSFAGLAALLNSAVVAAR
CHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RDDPLEVPHFGAPYSEPRHEQAASGA
CCCCCCCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MDVAGLPRLAAGTQAAIIHGMAQPPSLLTTDNGLPFGVQGACDSRFTGVIRAFAGLYPGR
CCCCCCCCHHCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
KFGGGALSVYIDDRQVVDVWTGWSDRQGKVPWTADTGAMVFSATKGLAATVIHRLVDRGL
CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
LSYDAPVAEYWPEFGANGKSEVTVSDVLRHRSGLAHLKGVDKDEVMDHLLMEQKLAAAPL
HHCCCCHHHHHHHHCCCCCCCEEHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCC
NRQHGKLAYHAVTYGWLLSGLARAVTGKGMRELFREELARPLNTDGIHLGRPPADSPTKA
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHH
AQTLLPQAKVPTPLLDFIAPKVAGLSFSGLLGAVYFPGILSLLQDDMPFLDGEVPAVNGV
HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
VTARALAKTYGALANDGVIDGTRLLSSQAVRGLTGKSELWPDLNLGLPFTYHQGYQSSPV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
PGLLEGYGHIGLGGTIGWADPETGSAFGYVHNRLLTLLLFDIGSFAGLAALLNSAVVAAR
CHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RDDPLEVPHFGAPYSEPRHEQAASGA
CCCCCCCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA