Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637809
Identifier: 121637809
GI number: 121637809
Start: 2151394
End: 2151798
Strand: Direct
Name: 121637809
Synonym: BCG_1942
Alternate gene names: NA
Gene position: 2151394-2151798 (Clockwise)
Preceding gene: 121637807
Following gene: 121637810
Centisome position: 49.18
GC content: 58.27
Gene sequence:
>405_bases ATGGTGCCTTTTCTGATGCGCGCCGCAGTGACCGGATTCGCATTATGGGTGGTGACTCTTTTCGTCCCGGGCATGCGGTT TGCGGGCGGCGACACAACGCTGCAGCGGGTCGCCATCATCTTCGTCGTCGCGGTGATCTTCGGTCTGGTCAACGCGTTCA TCAAGCCCATCGTGCAGATCTTGTCGATCCCGTTGTACATCCTGACTCTCGGTCTTTTCCATGTAGTCGTTAACGCGTCG ATGCTGTGGCTTACCGCGTGGATCACTGAGCACACCACCCACTGGGGACTGCAGATCGACCACTTCTGGTGGACCGCGAT CTGGGCGGCGATCTTGTTGTCGATCGTCAGCTGGATCCTGTCGCTGTTGGCTCGTGACTTTCGACGTGTCACTCGCGCAC ACTAG
Upstream 100 bases:
>100_bases GGTGCTGCCACGTCTGCATCGTGGCGTACCGGGCGCGGCACCGCGAGTCCGGGGACATGGCGAACAGCGGCGGCTCGCAT GTCCGTGGCAGGATCGGGCA
Downstream 100 bases:
>100_bases AGCCACAAATTTTGGTGGGGGGACATCCTAGGTTTTCGGGGCATGTTCCACTTATGCTTACTCACACTGCTTGCCAACCT CGTCCAAGACAGGCACCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MVPFLMRAAVTGFALWVVTLFVPGMRFAGGDTTLQRVAIIFVVAVIFGLVNAFIKPIVQILSIPLYILTLGLFHVVVNAS MLWLTAWITEHTTHWGLQIDHFWWTAIWAAILLSIVSWILSLLARDFRRVTRAH
Sequences:
>Translated_134_residues MVPFLMRAAVTGFALWVVTLFVPGMRFAGGDTTLQRVAIIFVVAVIFGLVNAFIKPIVQILSIPLYILTLGLFHVVVNAS MLWLTAWITEHTTHWGLQIDHFWWTAIWAAILLSIVSWILSLLARDFRRVTRAH >Mature_134_residues MVPFLMRAAVTGFALWVVTLFVPGMRFAGGDTTLQRVAIIFVVAVIFGLVNAFIKPIVQILSIPLYILTLGLFHVVVNAS MLWLTAWITEHTTHWGLQIDHFWWTAIWAAILLSIVSWILSLLARDFRRVTRAH
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007165 [H]
Pfam domain/function: PF04020 DUF360 [H]
EC number: NA
Molecular weight: Translated: 15200; Mature: 15200
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPFLMRAAVTGFALWVVTLFVPGMRFAGGDTTLQRVAIIFVVAVIFGLVNAFIKPIVQI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIPLYILTLGLFHVVVNASMLWLTAWITEHTTHWGLQIDHFWWTAIWAAILLSIVSWIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SLLARDFRRVTRAH HHHHHHHHHHHCCC >Mature Secondary Structure MVPFLMRAAVTGFALWVVTLFVPGMRFAGGDTTLQRVAIIFVVAVIFGLVNAFIKPIVQI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIPLYILTLGLFHVVVNASMLWLTAWITEHTTHWGLQIDHFWWTAIWAAILLSIVSWIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SLLARDFRRVTRAH HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8550407; 12000953 [H]