Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is lprJ
Identifier: 121637597
GI number: 121637597
Start: 1920745
End: 1921128
Strand: Direct
Name: lprJ
Synonym: BCG_1728
Alternate gene names: NA
Gene position: 1920745-1921128 (Clockwise)
Preceding gene: 121637596
Following gene: 121637598
Centisome position: 43.91
GC content: 62.76
Gene sequence:
>384_bases ATGACGGCACACACACACGACGGGACACGGACCTGGCGAACGGGCCGGCAGGCGACGACGTTGCTCGCGTTGCTGGCCGG GGTGTTTGGTGGTGCCGCGAGCTGCGCGGCGCCGATCCAGGCCGACATGATGGGTAACGCATTCCTGACAGCGTTGACCA ACGCCGGCATTGCCTATGACCAACCGGCGACCACGGTGGCGCTAGGCAGATCGGTTTGTCCGATGGTGGTTGCGCCGGGC GGGACGTTCGAATCGATCACGTCCAGAATGGCTGAGATCAATGGCATGTCGCGTGATATGGCGAGTACGTTCACCATTGT CGCGATTGGGACGTATTGCCCGGCGGTGATTGCGCCGCTGATGCCTAACCGGTTACAGGCCTGA
Upstream 100 bases:
>100_bases GCAAACCTTTATCCCACTGTGCTGTGAACGTGACTCTTGTTGGCCACTGTTGTCGAGGTGCCTTAAATGACGCAAGTGCG ACAACAACGAGAAGCGGGAG
Downstream 100 bases:
>100_bases TAGTTACGGGGCGCAGCAACCCCCGTAACCTCTACCGAGTGGTCGACGACAGGCAAGGGCGCAGGGGCGGGCGACGACCG CGCTCGGCTGCCGCCGACAA
Product: putative lipoprotein lprJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTAHTHDGTRTWRTGRQATTLLALLAGVFGGAASCAAPIQADMMGNAFLTALTNAGIAYDQPATTVALGRSVCPMVVAPG GTFESITSRMAEINGMSRDMASTFTIVAIGTYCPAVIAPLMPNRLQA
Sequences:
>Translated_127_residues MTAHTHDGTRTWRTGRQATTLLALLAGVFGGAASCAAPIQADMMGNAFLTALTNAGIAYDQPATTVALGRSVCPMVVAPG GTFESITSRMAEINGMSRDMASTFTIVAIGTYCPAVIAPLMPNRLQA >Mature_126_residues TAHTHDGTRTWRTGRQATTLLALLAGVFGGAASCAAPIQADMMGNAFLTALTNAGIAYDQPATTVALGRSVCPMVVAPGG TFESITSRMAEINGMSRDMASTFTIVAIGTYCPAVIAPLMPNRLQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13106; Mature: 12975
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHTHDGTRTWRTGRQATTLLALLAGVFGGAASCAAPIQADMMGNAFLTALTNAGIAYD CCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCC QPATTVALGRSVCPMVVAPGGTFESITSRMAEINGMSRDMASTFTIVAIGTYCPAVIAPL CCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC MPNRLQA CCCCCCC >Mature Secondary Structure TAHTHDGTRTWRTGRQATTLLALLAGVFGGAASCAAPIQADMMGNAFLTALTNAGIAYD CCCCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCC QPATTVALGRSVCPMVVAPGGTFESITSRMAEINGMSRDMASTFTIVAIGTYCPAVIAPL CCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC MPNRLQA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA