Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is argH
Identifier: 121637567
GI number: 121637567
Start: 1877906
End: 1879318
Strand: Direct
Name: argH
Synonym: BCG_1698
Alternate gene names: 121637567
Gene position: 1877906-1879318 (Clockwise)
Preceding gene: 121637566
Following gene: 121637568
Centisome position: 42.93
GC content: 71.13
Gene sequence:
>1413_bases GTGAGCACCAACGAGGGGTCGCTGTGGGGCGGGCGGTTCGCCGGCGGCCCGTCCGACGCGCTGGCCGCGCTGAGCAAGTC CACCCACTTCGACTGGGTGCTGGCCCCCTACGACCTCACCGCGTCGCGGGCGCACACCATGGTGCTGTTTCGGGCCGGGC TGCTCACCGAGGAGCAACGCGACGGGCTGCTCGCCGGCCTGGACAGCCTCGCCCAAGACGTCGCCGACGGCAGCTTCGGC CCGCTGGTCACCGACGAGGACGTGCATGCCGCGCTGGAGCGGGGCCTGATCGACCGGGTCGGACCGGACCTGGGCGGCCG GCTGCGGGCCGGGCGCTCGCGCAACGACCAGGTGGCCGCGCTGTTTCGGATGTGGCTGCGCGACGCGGTGCGCCGGGTCG CCACCGGTGTGCTCGACGTGGTCGGTGCGCTGGCAGAGCAGGCCGCCGCACACCCGAGCGCCATCATGCCCGGCAAAACC CACCTGCAGTCCGCCCAGCCGATCCTGCTGGCACACCATCTGCTCGCGCACGCCCACCCCCTGCTGCGCGACCTGGACCG CATCGTCGACTTCGACAAACGCGCGGCGGTGTCCCCGTACGGCTCGGGCGCCTTGGCCGGCTCGTCGCTGGGCCTGGATC CCGACGCGATCGCCGCGGACCTCGGTTTCTCGGCTGCCGCGGACAACTCCGTCGACGCGACCGCCGCCCGCGACTTCGCC GCCGAGGCGGCGTTCGTGTTCGCCATGATCGCCGTCGACCTGTCCCGGCTGGCTGAGGACATCATCGTCTGGAGCTCGAC GGAATTCGGCTACGTCACGTTGCATGACTCGTGGTCCACCGGTAGCTCGATCATGCCGCAGAAGAAGAATCCGGACATCG CCGAGCTGGCCCGCGGCAAGTCCGGGCGGCTGATCGGAAACCTGGCCGGGCTGCTGGCCACCCTGAAAGCCCAGCCCCTG GCCTACAACCGCGACCTGCAGGAAGACAAGGAGCCGGTGTTCGATTCGGTGGCCCAGCTGGAGCTGCTGCTGCCGGCGAT GGCCGGGCTGGTGGCCAGCCTGACCTTCAATGTCCAGCGGATGGCGGAGCTGGCCCCGGCCGGCTATACGTTGGCCACCG ATCTCGCCGAATGGCTTGTGCGGCAAGGTGTTCCGTTTAGGTCCGCGCATGAGGCCGCGGGTGCGGCGGTGCGTGCGGCC GAACAGCGCGGCGTGGGGCTGCAGGAACTCACCGACGACGAGCTGGCCGCCATCAGCCCCGAGCTGACCCCGCAAGTCCG CGAGGTGCTGACCATCGAAGGCTCGGTGTCGGCCCGCGATTGCCGGGGTGGCACCGCGCCGGGCCGGGTTGCCGAGCAAC TGAACGCCATTGGTGAAGCCGCCGAGCGGCTGCGCCGCCAGCTGGTGCGCTGA
Upstream 100 bases:
>100_bases GCCCGCCGGGATCTGCGGTGACGGTTCTCCCGCGAGCAGACGCAGAATCGCACCGCCACGCCCGTCGGCGTGCGATTCTG CGTCTGCTCGCCACAGAAAA
Downstream 100 bases:
>100_bases GGGGGCCTCGAAACTTTGCCGGCCAGTTCCAGGCGGGCTAAACTTCGGGCTCTAGGCGACCCGGTTGAACCATTCGGCCT CGATGTGCGTGTCAAAGGGG
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MSTNEGSLWGGRFAGGPSDALAALSKSTHFDWVLAPYDLTASRAHTMVLFRAGLLTEEQRDGLLAGLDSLAQDVADGSFG PLVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVAALFRMWLRDAVRRVATGVLDVVGALAEQAAAHPSAIMPGKT HLQSAQPILLAHHLLAHAHPLLRDLDRIVDFDKRAAVSPYGSGALAGSSLGLDPDAIAADLGFSAAADNSVDATAARDFA AEAAFVFAMIAVDLSRLAEDIIVWSSTEFGYVTLHDSWSTGSSIMPQKKNPDIAELARGKSGRLIGNLAGLLATLKAQPL AYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVQRMAELAPAGYTLATDLAEWLVRQGVPFRSAHEAAGAAVRAA EQRGVGLQELTDDELAAISPELTPQVREVLTIEGSVSARDCRGGTAPGRVAEQLNAIGEAAERLRRQLVR
Sequences:
>Translated_470_residues MSTNEGSLWGGRFAGGPSDALAALSKSTHFDWVLAPYDLTASRAHTMVLFRAGLLTEEQRDGLLAGLDSLAQDVADGSFG PLVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVAALFRMWLRDAVRRVATGVLDVVGALAEQAAAHPSAIMPGKT HLQSAQPILLAHHLLAHAHPLLRDLDRIVDFDKRAAVSPYGSGALAGSSLGLDPDAIAADLGFSAAADNSVDATAARDFA AEAAFVFAMIAVDLSRLAEDIIVWSSTEFGYVTLHDSWSTGSSIMPQKKNPDIAELARGKSGRLIGNLAGLLATLKAQPL AYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVQRMAELAPAGYTLATDLAEWLVRQGVPFRSAHEAAGAAVRAA EQRGVGLQELTDDELAAISPELTPQVREVLTIEGSVSARDCRGGTAPGRVAEQLNAIGEAAERLRRQLVR >Mature_469_residues STNEGSLWGGRFAGGPSDALAALSKSTHFDWVLAPYDLTASRAHTMVLFRAGLLTEEQRDGLLAGLDSLAQDVADGSFGP LVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVAALFRMWLRDAVRRVATGVLDVVGALAEQAAAHPSAIMPGKTH LQSAQPILLAHHLLAHAHPLLRDLDRIVDFDKRAAVSPYGSGALAGSSLGLDPDAIAADLGFSAAADNSVDATAARDFAA EAAFVFAMIAVDLSRLAEDIIVWSSTEFGYVTLHDSWSTGSSIMPQKKNPDIAELARGKSGRLIGNLAGLLATLKAQPLA YNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVQRMAELAPAGYTLATDLAEWLVRQGVPFRSAHEAAGAAVRAAE QRGVGLQELTDDELAAISPELTPQVREVLTIEGSVSARDCRGGTAPGRVAEQLNAIGEAAERLRRQLVR
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily
Homologues:
Organism=Homo sapiens, GI31541964, Length=458, Percent_Identity=43.2314410480349, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI68303542, Length=458, Percent_Identity=43.2314410480349, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI68303549, Length=458, Percent_Identity=40.8296943231441, Blast_Score=329, Evalue=3e-90, Organism=Homo sapiens, GI68303547, Length=458, Percent_Identity=40.3930131004367, Blast_Score=327, Evalue=2e-89, Organism=Escherichia coli, GI1790398, Length=459, Percent_Identity=41.8300653594771, Blast_Score=323, Evalue=2e-89, Organism=Saccharomyces cerevisiae, GI6321806, Length=459, Percent_Identity=39.6514161220044, Blast_Score=327, Evalue=3e-90, Organism=Drosophila melanogaster, GI221473854, Length=461, Percent_Identity=40.997830802603, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI78706858, Length=461, Percent_Identity=40.997830802603, Blast_Score=342, Evalue=3e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARLY_MYCBO (P0A4Z1)
Other databases:
- EMBL: BX248339 - RefSeq: NP_855339.1 - ProteinModelPortal: P0A4Z1 - SMR: P0A4Z1 - EnsemblBacteria: EBMYCT00000015229 - GeneID: 1092631 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1687 - GeneTree: EBGT00050000016253 - HOGENOM: HBG539632 - OMA: MPGRTHL - ProtClustDB: PRK00855 - BioCyc: MBOV233413:MB1687-MONOMER - BRENDA: 4.3.2.1 - GO: GO:0005737 - HAMAP: MF_00006 - InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - PANTHER: PTHR11444:SF3 - PRINTS: PR00145 - PRINTS: PR00149 - TIGRFAMs: TIGR00838
Pfam domain/function: PF00206 Lyase_1; SSF48557 L-Aspartase-like
EC number: =4.3.2.1
Molecular weight: Translated: 49775; Mature: 49644
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNEGSLWGGRFAGGPSDALAALSKSTHFDWVLAPYDLTASRAHTMVLFRAGLLTEEQR CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHH DGLLAGLDSLAQDVADGSFGPLVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVAA CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LFRMWLRDAVRRVATGVLDVVGALAEQAAAHPSAIMPGKTHLQSAQPILLAHHLLAHAHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH LLRDLDRIVDFDKRAAVSPYGSGALAGSSLGLDPDAIAADLGFSAAADNSVDATAARDFA HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH AEAAFVFAMIAVDLSRLAEDIIVWSSTEFGYVTLHDSWSTGSSIMPQKKNPDIAELARGK HHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCC SGRLIGNLAGLLATLKAQPLAYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVQR CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAELAPAGYTLATDLAEWLVRQGVPFRSAHEAAGAAVRAAEQRGVGLQELTDDELAAISP HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCC ELTPQVREVLTIEGSVSARDCRGGTAPGRVAEQLNAIGEAAERLRRQLVR CCCHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STNEGSLWGGRFAGGPSDALAALSKSTHFDWVLAPYDLTASRAHTMVLFRAGLLTEEQR CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHH DGLLAGLDSLAQDVADGSFGPLVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVAA CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LFRMWLRDAVRRVATGVLDVVGALAEQAAAHPSAIMPGKTHLQSAQPILLAHHLLAHAHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH LLRDLDRIVDFDKRAAVSPYGSGALAGSSLGLDPDAIAADLGFSAAADNSVDATAARDFA HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH AEAAFVFAMIAVDLSRLAEDIIVWSSTEFGYVTLHDSWSTGSSIMPQKKNPDIAELARGK HHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCC SGRLIGNLAGLLATLKAQPLAYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVQR CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAELAPAGYTLATDLAEWLVRQGVPFRSAHEAAGAAVRAAEQRGVGLQELTDDELAAISP HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCC ELTPQVREVLTIEGSVSARDCRGGTAPGRVAEQLNAIGEAAERLRRQLVR CCCHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972