Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is mmpL6 [H]
Identifier: 121637478
GI number: 121637478
Start: 1774529
End: 1777432
Strand: Direct
Name: mmpL6 [H]
Synonym: BCG_1609
Alternate gene names: 121637478
Gene position: 1774529-1777432 (Clockwise)
Preceding gene: 121637477
Following gene: 121637479
Centisome position: 40.57
GC content: 60.81
Gene sequence:
>2904_bases ATGAGCAACCACCACCGCCCGCGGCCTTGGTTGCCGCACACCATCCGACGGCTTTCGTTGCCGATCTTGCTGTTTTGGGT GGGTGTGGCCGCCATAACCAATGCCGCCGTGCCGCAATTGGAGGTGGTCGGGGAGGCGCATAACGTCGCACAGAGCTCCC CGGATGACCCGTCGCTGCAGGCGATGAAACGCATCGGCAAGGTGTTCCACGAGTTCGATTCCGACAGTGCGGCCATGATC GTCTTGGAAGGCGATAAGCCGCTCGGCAACGACGCCCACCGGTTCTACGACACCCTGCTCCGCAACCTTTCAAACGACAC CAAACACGTCGAGCACGTTCAGGACTTCTGGGGCGATCCGCTGACCGCGGCCGGCTCGCAAAGCACCGACGGCAAAGCCG CCTACGTTCAGGTCTATCTCGCCGGCAACCAAGGCGAGGCGTTGTCAATCGAGTCCGTCGACGCGGTGCGCGACATCGTC GCCCATACGCCACCACCGGCCGGGGTCAAGGCCTACGTCACCGGCGCGGCCCCGCTCATGGCCGATCAGTTTCAGGTGGG CAGCAAAGGAACCGCGAAAGTTACCGGGATAACTCTGGTTGTGATCGCGGTGATGTTGCTCTTCGTATACCGTTCCGTCG TCACCATGGTCCTGGTGCTTATCACGGTTCTTATTGAGTTGGCCGCGGCCCGCGGGATCGTCGCTTTTCTCGGAAACGCC GGGGTAATCGGGCTGTCGACATACTCGACGAATCTGCTCACACTATTGGTAATCGCGGCGGGCACAGACTACGCGATTTT TGTCCTCGGCCGCTATCACGAGGCGCGCTACGCCGCACAGGATCGGGAAACGGCCTTCTACACGATGTATCGCGGGACCG CCCACGTCGTCTTGGGCTCGGGTCTGACCGTTGCCGGCGCGGTGTATTGCCTGAGCTTTACCCGGCTACCCTATTTTCAA AGCCTGGGTATTCCCGCCTCGATAGGGGTGATGATTGCGTTGGCAGCCGCGCTCAGCCTGGCCCCATCCGTGCTCATCTT GGGCAGTCGTTTCGGTTGTTTCGAACCCAAGCGCAGGATGAGGACCAGGGGATGGCGGCGCATCGGCACGGCCATCGTGC GTTGGCCGGGACCCATCCTGGCAGTGGCGTGCGCAATTGCGGTGGTGGGTCTGCTCGCGCTGCCGGGATACAAAACGAGC TACGACGCTCGCTATTACATGCCCGCCACCGCCCCGGCCAATATTGGCTACATGGCCGCGGAGCGACATTTTCCCCAAGC GCGGCTGAATCCCGAACTACTGATGATCGAGACGGATCACGATATGCGCAATCCGGCCGACATGCTCATCTTGGATAGGA TCGCCAAGGCTGTCTTCCATCTGCCCGGCATAGGGCTGGTGCAGGCCATGACCCGGCCGCTAGGAACCCCGATTGACCAC AGCTCGATACCGTTTCAGATCAGCATGCAAAGCGTCGGCCAGATTCAGAATCTCAAGTATCAGAGGGACCGAGCAGCCGA CTTGCTGAAGCAGGCCGAAGAGCTGGGGAAGACGATCGAAATCTTGCAGCGCCAATATGCCCTACAGCAGGAACTCGCGG CCGCTACTCACGAGCAAGCCGAAAGCTTTCACCAAACGATCGCCACGGTAAAGGAACTGCGAGATAGGATCGCCAATTTC GACGATTTCTTCAGGCCGATTCGTAGTTACTTTTACTGGGAAAAGCACTGCTACGATATCCCGAGCTGCTGGGCGCTGAG ATCCGTCTTTGACACGATCGACGGTATCGACCAACTCGGCGAGCAGCTGGCCAGCGTGACCGTAACCTTGGACAAGTTGG CTGCGATCCAGCCTCAATTGGTGGCGCTGCTACCAGACGAGATCGCCAGCCAGCAGATCAATCGGGAACTGGCGCTGGCT AACTACGCCACCATGTCCGGGATCTATGCCCAGACGGCGGCCTTGATCGAAAACGCTGCCGCCATGGGACAAGCCTTTGA CGCCGCCAAGAACGACGACTCCTTCTATCTGCCGCCGGAGGCTTTTGACAACCCAGATTTCCAGCGCGGCCTGAAATTGT TCCTGTCGGCAGACGGTAAGGCGGCTCGGATGATCATCTCCCATGAAGGCGATCCCGCCACCCCCGAAGGCATTTCGCAT ATCGACGCGATCAAGCAGGCGGCCCACGAGGCCGTGAAGGGCACTCCCATGGCGGGTGCTGGGATCTATCTGGCCGGCAC GGCCGCCACCTTCAAGGACATTCAAGACGGCGCCACCTACGACCTCCTGATCGCCGGAATAGCCGCGCTGAGCTTGATTT TGCTCATCATGATGATCATTACCCGAAGCCTGGTTGCGGCGCTGGTGATCGTGGGCACGGTGGCGCTGTCGTTGGGCGCT TCTTTTGGCCTGTCCGTGCTGGTGTGGCAGCATCTTCTCGGTATCCAGTTGTACTGGATCGTGCTCGCGCTGGCCGTCAT CCTGCTCCTGGCCGTGGGATCGGACTATAACTTGCTGCTGATTTCCCGATTCAAGGAGGAGATCGGTGCAGGTTTGAACA CCGGCATCATCCGTGCGATGGCCGGCACCGGCGGGGTGGTGACCGCTGCCGGCCTGGTGTTCGCCGCCACTATGTCTTCG TTCGTGTTCAGTGATTTGCGGGTCCTCGGTCAGATCGGGACCACCATTGGTCTTGGGCTGCTGTTCGACACGCTGGTGGT GCGCGCGTTCATGACCCCGTCCATCGCGGTGCTGCTCGGGCGCTGGTTCTGGTGGCCGCAACGAGTGCGCCCGCGCCCTG CCAGCAGGATGCTTCGGCCGTACGGCCCGCGGCCCGTGGTTCGTGAATTGCTGCTGCGCGAGGGCAACGATGACCCGAGA ACTCAGGTGGCTACCCACCGTTAA
Upstream 100 bases:
>100_bases GCAATTCCATCGGCTGCCGCATCACCGTCAACGGTGTAGTCAAGGACGAAAGGATCGTCAACGAAGTGCGCGCCTATACC TTCTGCCTCGACAAGTCCTC
Downstream 100 bases:
>100_bases GGTGGTGGGATGCCGCTTTCAGGGGAATATGCGCCGAGCCCGCTCGACTGGTCGCGCGAGCAAGCCGACACGTATATGAA GTCCGGCGGAACCGAGGGCA
Product: putative transmembrane transport protein mmpL6
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 967; Mature: 966
Protein sequence:
>967_residues MSNHHRPRPWLPHTIRRLSLPILLFWVGVAAITNAAVPQLEVVGEAHNVAQSSPDDPSLQAMKRIGKVFHEFDSDSAAMI VLEGDKPLGNDAHRFYDTLLRNLSNDTKHVEHVQDFWGDPLTAAGSQSTDGKAAYVQVYLAGNQGEALSIESVDAVRDIV AHTPPPAGVKAYVTGAAPLMADQFQVGSKGTAKVTGITLVVIAVMLLFVYRSVVTMVLVLITVLIELAAARGIVAFLGNA GVIGLSTYSTNLLTLLVIAAGTDYAIFVLGRYHEARYAAQDRETAFYTMYRGTAHVVLGSGLTVAGAVYCLSFTRLPYFQ SLGIPASIGVMIALAAALSLAPSVLILGSRFGCFEPKRRMRTRGWRRIGTAIVRWPGPILAVACAIAVVGLLALPGYKTS YDARYYMPATAPANIGYMAAERHFPQARLNPELLMIETDHDMRNPADMLILDRIAKAVFHLPGIGLVQAMTRPLGTPIDH SSIPFQISMQSVGQIQNLKYQRDRAADLLKQAEELGKTIEILQRQYALQQELAAATHEQAESFHQTIATVKELRDRIANF DDFFRPIRSYFYWEKHCYDIPSCWALRSVFDTIDGIDQLGEQLASVTVTLDKLAAIQPQLVALLPDEIASQQINRELALA NYATMSGIYAQTAALIENAAAMGQAFDAAKNDDSFYLPPEAFDNPDFQRGLKLFLSADGKAARMIISHEGDPATPEGISH IDAIKQAAHEAVKGTPMAGAGIYLAGTAATFKDIQDGATYDLLIAGIAALSLILLIMMIITRSLVAALVIVGTVALSLGA SFGLSVLVWQHLLGIQLYWIVLALAVILLLAVGSDYNLLLISRFKEEIGAGLNTGIIRAMAGTGGVVTAAGLVFAATMSS FVFSDLRVLGQIGTTIGLGLLFDTLVVRAFMTPSIAVLLGRWFWWPQRVRPRPASRMLRPYGPRPVVRELLLREGNDDPR TQVATHR
Sequences:
>Translated_967_residues MSNHHRPRPWLPHTIRRLSLPILLFWVGVAAITNAAVPQLEVVGEAHNVAQSSPDDPSLQAMKRIGKVFHEFDSDSAAMI VLEGDKPLGNDAHRFYDTLLRNLSNDTKHVEHVQDFWGDPLTAAGSQSTDGKAAYVQVYLAGNQGEALSIESVDAVRDIV AHTPPPAGVKAYVTGAAPLMADQFQVGSKGTAKVTGITLVVIAVMLLFVYRSVVTMVLVLITVLIELAAARGIVAFLGNA GVIGLSTYSTNLLTLLVIAAGTDYAIFVLGRYHEARYAAQDRETAFYTMYRGTAHVVLGSGLTVAGAVYCLSFTRLPYFQ SLGIPASIGVMIALAAALSLAPSVLILGSRFGCFEPKRRMRTRGWRRIGTAIVRWPGPILAVACAIAVVGLLALPGYKTS YDARYYMPATAPANIGYMAAERHFPQARLNPELLMIETDHDMRNPADMLILDRIAKAVFHLPGIGLVQAMTRPLGTPIDH SSIPFQISMQSVGQIQNLKYQRDRAADLLKQAEELGKTIEILQRQYALQQELAAATHEQAESFHQTIATVKELRDRIANF DDFFRPIRSYFYWEKHCYDIPSCWALRSVFDTIDGIDQLGEQLASVTVTLDKLAAIQPQLVALLPDEIASQQINRELALA NYATMSGIYAQTAALIENAAAMGQAFDAAKNDDSFYLPPEAFDNPDFQRGLKLFLSADGKAARMIISHEGDPATPEGISH IDAIKQAAHEAVKGTPMAGAGIYLAGTAATFKDIQDGATYDLLIAGIAALSLILLIMMIITRSLVAALVIVGTVALSLGA SFGLSVLVWQHLLGIQLYWIVLALAVILLLAVGSDYNLLLISRFKEEIGAGLNTGIIRAMAGTGGVVTAAGLVFAATMSS FVFSDLRVLGQIGTTIGLGLLFDTLVVRAFMTPSIAVLLGRWFWWPQRVRPRPASRMLRPYGPRPVVRELLLREGNDDPR TQVATHR >Mature_966_residues SNHHRPRPWLPHTIRRLSLPILLFWVGVAAITNAAVPQLEVVGEAHNVAQSSPDDPSLQAMKRIGKVFHEFDSDSAAMIV LEGDKPLGNDAHRFYDTLLRNLSNDTKHVEHVQDFWGDPLTAAGSQSTDGKAAYVQVYLAGNQGEALSIESVDAVRDIVA HTPPPAGVKAYVTGAAPLMADQFQVGSKGTAKVTGITLVVIAVMLLFVYRSVVTMVLVLITVLIELAAARGIVAFLGNAG VIGLSTYSTNLLTLLVIAAGTDYAIFVLGRYHEARYAAQDRETAFYTMYRGTAHVVLGSGLTVAGAVYCLSFTRLPYFQS LGIPASIGVMIALAAALSLAPSVLILGSRFGCFEPKRRMRTRGWRRIGTAIVRWPGPILAVACAIAVVGLLALPGYKTSY DARYYMPATAPANIGYMAAERHFPQARLNPELLMIETDHDMRNPADMLILDRIAKAVFHLPGIGLVQAMTRPLGTPIDHS SIPFQISMQSVGQIQNLKYQRDRAADLLKQAEELGKTIEILQRQYALQQELAAATHEQAESFHQTIATVKELRDRIANFD DFFRPIRSYFYWEKHCYDIPSCWALRSVFDTIDGIDQLGEQLASVTVTLDKLAAIQPQLVALLPDEIASQQINRELALAN YATMSGIYAQTAALIENAAAMGQAFDAAKNDDSFYLPPEAFDNPDFQRGLKLFLSADGKAARMIISHEGDPATPEGISHI DAIKQAAHEAVKGTPMAGAGIYLAGTAATFKDIQDGATYDLLIAGIAALSLILLIMMIITRSLVAALVIVGTVALSLGAS FGLSVLVWQHLLGIQLYWIVLALAVILLLAVGSDYNLLLISRFKEEIGAGLNTGIIRAMAGTGGVVTAAGLVFAATMSSF VFSDLRVLGQIGTTIGLGLLFDTLVVRAFMTPSIAVLLGRWFWWPQRVRPRPASRMLRPYGPRPVVRELLLREGNDDPRT QVATHR
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 104945; Mature: 104814
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHHRPRPWLPHTIRRLSLPILLFWVGVAAITNAAVPQLEVVGEAHNVAQSSPDDPSLQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCCCCCHHHH AMKRIGKVFHEFDSDSAAMIVLEGDKPLGNDAHRFYDTLLRNLSNDTKHVEHVQDFWGDP HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC LTAAGSQSTDGKAAYVQVYLAGNQGEALSIESVDAVRDIVAHTPPPAGVKAYVTGAAPLM CCCCCCCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH ADQFQVGSKGTAKVTGITLVVIAVMLLFVYRSVVTMVLVLITVLIELAAARGIVAFLGNA HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVIGLSTYSTNLLTLLVIAAGTDYAIFVLGRYHEARYAAQDRETAFYTMYRGTAHVVLGS CEEEEEHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCCEEEEEECCCEEEEECC GLTVAGAVYCLSFTRLPYFQSLGIPASIGVMIALAAALSLAPSVLILGSRFGCFEPKRRM CHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHH RTRGWRRIGTAIVRWPGPILAVACAIAVVGLLALPGYKTSYDARYYMPATAPANIGYMAA HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHH ERHFPQARLNPELLMIETDHDMRNPADMLILDRIAKAVFHLPGIGLVQAMTRPLGTPIDH HHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC SSIPFQISMQSVGQIQNLKYQRDRAADLLKQAEELGKTIEILQRQYALQQELAAATHEQA CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESFHQTIATVKELRDRIANFDDFFRPIRSYFYWEKHCYDIPSCWALRSVFDTIDGIDQLG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH EQLASVTVTLDKLAAIQPQLVALLPDEIASQQINRELALANYATMSGIYAQTAALIENAA HHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMGQAFDAAKNDDSFYLPPEAFDNPDFQRGLKLFLSADGKAARMIISHEGDPATPEGISH HHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH IDAIKQAAHEAVKGTPMAGAGIYLAGTAATFKDIQDGATYDLLIAGIAALSLILLIMMII HHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TRSLVAALVIVGTVALSLGASFGLSVLVWQHLLGIQLYWIVLALAVILLLAVGSDYNLLL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ISRFKEEIGAGLNTGIIRAMAGTGGVVTAAGLVFAATMSSFVFSDLRVLGQIGTTIGLGL HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFDTLVVRAFMTPSIAVLLGRWFWWPQRVRPRPASRMLRPYGPRPVVRELLLREGNDDPR HHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCC TQVATHR CCCCCCC >Mature Secondary Structure SNHHRPRPWLPHTIRRLSLPILLFWVGVAAITNAAVPQLEVVGEAHNVAQSSPDDPSLQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCCCCCHHHH AMKRIGKVFHEFDSDSAAMIVLEGDKPLGNDAHRFYDTLLRNLSNDTKHVEHVQDFWGDP HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC LTAAGSQSTDGKAAYVQVYLAGNQGEALSIESVDAVRDIVAHTPPPAGVKAYVTGAAPLM CCCCCCCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH ADQFQVGSKGTAKVTGITLVVIAVMLLFVYRSVVTMVLVLITVLIELAAARGIVAFLGNA HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVIGLSTYSTNLLTLLVIAAGTDYAIFVLGRYHEARYAAQDRETAFYTMYRGTAHVVLGS CEEEEEHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCCEEEEEECCCEEEEECC GLTVAGAVYCLSFTRLPYFQSLGIPASIGVMIALAAALSLAPSVLILGSRFGCFEPKRRM CHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHH RTRGWRRIGTAIVRWPGPILAVACAIAVVGLLALPGYKTSYDARYYMPATAPANIGYMAA HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHH ERHFPQARLNPELLMIETDHDMRNPADMLILDRIAKAVFHLPGIGLVQAMTRPLGTPIDH HHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC SSIPFQISMQSVGQIQNLKYQRDRAADLLKQAEELGKTIEILQRQYALQQELAAATHEQA CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESFHQTIATVKELRDRIANFDDFFRPIRSYFYWEKHCYDIPSCWALRSVFDTIDGIDQLG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH EQLASVTVTLDKLAAIQPQLVALLPDEIASQQINRELALANYATMSGIYAQTAALIENAA HHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMGQAFDAAKNDDSFYLPPEAFDNPDFQRGLKLFLSADGKAARMIISHEGDPATPEGISH HHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH IDAIKQAAHEAVKGTPMAGAGIYLAGTAATFKDIQDGATYDLLIAGIAALSLILLIMMII HHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TRSLVAALVIVGTVALSLGASFGLSVLVWQHLLGIQLYWIVLALAVILLLAVGSDYNLLL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ISRFKEEIGAGLNTGIIRAMAGTGGVVTAAGLVFAATMSSFVFSDLRVLGQIGTTIGLGL HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFDTLVVRAFMTPSIAVLLGRWFWWPQRVRPRPASRMLRPYGPRPVVRELLLREGNDDPR HHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCC TQVATHR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]