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The map label for this gene is mmpS6

Identifier: 121637477

GI number: 121637477

Start: 1774086

End: 1774532

Strand: Direct

Name: mmpS6

Synonym: BCG_1608

Alternate gene names: NA

Gene position: 1774086-1774532 (Clockwise)

Preceding gene: 121637476

Following gene: 121637478

Centisome position: 40.55

GC content: 60.4

Gene sequence:

>447_bases
GTGCAGGGGATTTCAGTGACTGGCCTGGTCAAACGCGGCTGGATGGTGCTGGTTGCCGTGGCGGTGGTGGCGGTCGCGGG
ATTCAGCGTCTATCGGTTGCACGGCATCTTCGGCTCGCACGACACCACCTCGACCGCCGGTGGTGTCGCGAACGACATCA
AGCCGTTCAACCCCAAACAGGTAACCCTCGAGGTCTTTGGCGCTCCCGGAACCGTGGCAACGATCAATTATCTGGACGTG
GATGCCACACCTCGGCAAGTCCTGGACACGACCCTGCCGTGGTCATACACGATCACGACGACCCTGCCCGCGGTCTTCGC
CAATGTTGTCGCGCAAGGCGACAGCAATTCCATCGGCTGCCGCATCACCGTCAACGGTGTAGTCAAGGACGAAAGGATCG
TCAACGAAGTGCGCGCCTATACCTTCTGCCTCGACAAGTCCTCATGA

Upstream 100 bases:

>100_bases
GGTCCCGTACCGTACTGTTGAATCCGCGGATCCCCGCCTGAGGTACGGGGCGTGGTCGCGCCCCGGGCAATAGCGTCGCC
GGTTATCGAAAGGCTAACGG

Downstream 100 bases:

>100_bases
GCAACCACCACCGCCCGCGGCCTTGGTTGCCGCACACCATCCGACGGCTTTCGTTGCCGATCTTGCTGTTTTGGGTGGGT
GTGGCCGCCATAACCAATGC

Product: putative membrane protein mmpS6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTSTAGGVANDIKPFNPKQVTLEVFGAPGTVATINYLDV
DATPRQVLDTTLPWSYTITTTLPAVFANVVAQGDSNSIGCRITVNGVVKDERIVNEVRAYTFCLDKSS

Sequences:

>Translated_148_residues
MQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTSTAGGVANDIKPFNPKQVTLEVFGAPGTVATINYLDV
DATPRQVLDTTLPWSYTITTTLPAVFANVVAQGDSNSIGCRITVNGVVKDERIVNEVRAYTFCLDKSS
>Mature_148_residues
MQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTSTAGGVANDIKPFNPKQVTLEVFGAPGTVATINYLDV
DATPRQVLDTTLPWSYTITTTLPAVFANVVAQGDSNSIGCRITVNGVVKDERIVNEVRAYTFCLDKSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 15720; Mature: 15720

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTSTAGGVANDIKPFNPKQ
CCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCE
VTLEVFGAPGTVATINYLDVDATPRQVLDTTLPWSYTITTTLPAVFANVVAQGDSNSIGC
EEEEEECCCCCEEEEEEEECCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEE
RITVNGVVKDERIVNEVRAYTFCLDKSS
EEEECCEECHHHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTSTAGGVANDIKPFNPKQ
CCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCE
VTLEVFGAPGTVATINYLDVDATPRQVLDTTLPWSYTITTTLPAVFANVVAQGDSNSIGC
EEEEEECCCCCEEEEEEEECCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEE
RITVNGVVKDERIVNEVRAYTFCLDKSS
EEEECCEECHHHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]