The gene/protein map for NC_008769 is currently unavailable.
Definition Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
Accession NC_008769
Length 4,374,522

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The map label for this gene is nifU [H]

Identifier: 121637395

GI number: 121637395

Start: 1677840

End: 1678328

Strand: Direct

Name: nifU [H]

Synonym: BCG_1526

Alternate gene names: 121637395

Gene position: 1677840-1678328 (Clockwise)

Preceding gene: 121637394

Following gene: 121637396

Centisome position: 38.35

GC content: 64.01

Gene sequence:

>489_bases
GTGACGTTGCGTCTGGAGCAGATCTATCAGGACGTGATCCTCGATCACTACAAGCATCCGCAGCATCGGGGGCTGCGGGA
GCCGTTCGGCGCCCAGGTGTATCACGTGAACCCGATCTGCGGCGACGAGGTCACGCTGCGGGTCGCGTTGTCCGAGGACG
GCACCAGGGTCACCGACGTTTCCTATGACGGACAAGGCTGTTCGATCAGCCAGGCCGCGACCTCGGTGCTCACCGAACAG
GTAATCGGACAACGCGTGCCGCGGGCGCTGAACATCGTCGACGCCTTCACCGAAATGGTGTCCTCCCGCGGGACCGTGCC
AGGCGACGAGGACGTCTTAGGCGATGGGGTCGCGTTCGCCGGGGTGGCCAAATACCCGGCCCGGGTGAAATGCGCGCTGC
TCGGATGGATGGCGTTCAAAGATGCGCTGGCCCAAGCCAGCGAAGCCTTCGAGGAGGTTACAGATGAGCGAAACCAGCGC
ACCGGCTGA

Upstream 100 bases:

>100_bases
CCGCCACCGCGCGGGCGTCGTTCGCGGTGTACAACACCGCAGACGAGGTGGACCGCTTGGTGGCCGGCGTGCGGCGATCC
CGGCATTTCTTTGGAAGAGC

Downstream 100 bases:

>100_bases
GGAATTGCTCGCCGACGTCGAGGAGGCGATGCGCGACGTCGTCGACCCGGAGCTGGGGATCAACGTCGTTGACCTGGGCC
TGGTCTACGGCTTGGACGTG

Product: putative nitrogen fixation related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSYDGQGCSISQAATSVLTEQ
VIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQR
TG

Sequences:

>Translated_162_residues
MTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSYDGQGCSISQAATSVLTEQ
VIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQR
TG
>Mature_161_residues
TLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSYDGQGCSISQAATSVLTEQV
IGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRT
G

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17711; Mature: 17580

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDV
CCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE
SYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
GVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRTG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDV
CCHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE
SYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
GVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRTG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]