Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is dfp
Identifier: 121637321
GI number: 121637321
Start: 1590601
End: 1591857
Strand: Direct
Name: dfp
Synonym: BCG_1452
Alternate gene names: 121637321
Gene position: 1590601-1591857 (Clockwise)
Preceding gene: 121637320
Following gene: 121637322
Centisome position: 36.36
GC content: 67.78
Gene sequence:
>1257_bases GTGGTGGACCATAAACGGATCCCCAAGCAGGTAATAGTCGGTGTCTCCGGGGGCATCGCCGCCTACAAGGCGTGCACGGT TGTTCGTCAACTCACCGAGGCCAGTCATCGCGTCCGAGTCATTCCCACCGAATCCGCCCTGCGCTTCGTCGGTGCCGCGA CCTTCGAGGCGCTCTCCGGTGAGCCGGTGTGCACCGACGTTTTCGCCGACGTTCCGGCGGTCCCGCATGTTCACCTCGGC CAGCAGGCCGATCTGGTCGTAGTGGCGCCGGCCACCGCCGACCTGCTGGCCCGCGCGGCGGCCGGTCGAGCCGACGATCT GCTGACCGCGACGCTGCTGACGGCGCGGTGTCCGGTGCTGTTCGCGCCGGCGATGCACACCGAGATGTGGTTGCATCCGG CCACCGTCGACAACGTGGCCACGCTGCGCCGCCGCGGCGCGGTGGTGCTCGAGCCCGCGACAGGACGGCTTACCGGCGCC GACAGCGGGGCCGGCCGACTGCCCGAGGCGGAGGAGATCACCACCCTCGCCCAGCTGCTGCTGGAGCGGCACGACGCCCT GCCCTACGATCTCGCGGGGCGAAAGCTGCTGGTTACCGCCGGTGGCACACGCGAGCCGATCGATCCGGTGCGCTTTATCG GCAACCGCAGCTCCGGCAAGCAGGGCTATGCGGTGGCGCGGGTGGCCGCCCAGCGCGGCGCCGACGTTACTTTGATCGCT GGGCATACCGCAGGGCTCGTCGATCCCGCCGGCGTCGAGGTGGTGCACGTCAGCTCGGCCCAGCAACTCGCCGACGCGGT GTCCAAGCACGCTCCGACCGCCGACGTATTGGTGATGGCGGCGGCCGTCGCCGACTTCCGGCCCGCGCAGGTTGCCACCG CCAAAATCAAGAAAGGCGTCGAAGGCCCACCGACCATCGAGCTGCTGCGCAACGACGACGTGCTGGCCGGGGTGGTGCGG GCCCGAGCCCATGGACAACTGCCCAACATGCGGGCCATTGTGGGCTTCGCAGCCGAGACCGGCGACGCCAATGGCGACGT GCTCTTTCATGCCCGAGCTAAACTGCGACGCAAAGGCTGCGATCTGTTAGTCGTCAATGCCGTCGGCGAAGGCAGGGCCT TTGAGGTAGACAGCAACGACGGCTGGCTACTGGCGTCCGATGGTACCGAGTCGGCATTGCAGCACGGCTCCAAGACACTG ATGGCGAGCCGTATCGTTGATGCAATCGTCACGTTCCTGGCAGGCTGTAGCAGCTAA
Upstream 100 bases:
>100_bases TGAGCCGGGGTTGCAAGAGAAGCCGTTGTCCATCGCGTTGCGCGAGATCCACGCCGATCTGCTCGAGCACACCGAGGGCG AGTAGCAGGGCAGGCCTGAG
Downstream 100 bases:
>100_bases CGGGTCCGGCGGCCGGTTCTGTACGGGTCCTGGACAGGTGCTGGACGATCCCTTGCTCGATTGGACGAGCTGAGATTGAT GCCTGAGGATATAATTCGGC
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLG QQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGA DSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIA GHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVR ARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTL MASRIVDAIVTFLAGCSS
Sequences:
>Translated_418_residues MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLG QQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGA DSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIA GHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVR ARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTL MASRIVDAIVTFLAGCSS >Mature_418_residues MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLG QQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGA DSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIA GHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVR ARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTL MASRIVDAIVTFLAGCSS
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family
Homologues:
Organism=Homo sapiens, GI71725351, Length=182, Percent_Identity=32.967032967033, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI87082301, Length=408, Percent_Identity=39.9509803921569, Blast_Score=227, Evalue=1e-60, Organism=Drosophila melanogaster, GI24657262, Length=181, Percent_Identity=27.6243093922652, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COABC_MYCBO (P67734)
Other databases:
- EMBL: BX248338 - RefSeq: NP_855078.1 - ProteinModelPortal: P67734 - EnsemblBacteria: EBMYCT00000016249 - GeneID: 1090715 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1426 - GeneTree: EBGT00050000017596 - HOGENOM: HBG523890 - OMA: VTSGPTH - ProtClustDB: PRK05579 - BioCyc: MBOV233413:MB1426-MONOMER - BRENDA: 4.1.1.36 - BRENDA: 6.3.2.5 - InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 - Gene3D: G3DSA:3.40.50.10300 - Gene3D: G3DSA:3.40.50.1950 - TIGRFAMs: TIGR00521
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein; SSF102645 DNA/pantothenate-metab_flavo_C; SSF52507 Flavoprotein
EC number: =4.1.1.36; =6.3.2.5
Molecular weight: Translated: 43577; Mature: 43577
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: BINDING 285-285 BINDING 295-295 BINDING 354-354 BINDING 358-358
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSG CCCCHHCCHHHEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCC EPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVL CCCHHHHHHCCCCCCCEECCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEE FAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLL ECCCHHHHHEECCCCHHHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHH LERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIA HHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEE GHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGV CCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCC EGPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGC CCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHHHCCC DLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS CEEEEEECCCCEEEEECCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSG CCCCHHCCHHHEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCC EPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVL CCCHHHHHHCCCCCCCEECCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEE FAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLL ECCCHHHHHEECCCCHHHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHH LERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIA HHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEE GHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGV CCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCC EGPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGC CCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHHHCCC DLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS CEEEEEECCCCEEEEECCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972