Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637243
Identifier: 121637243
GI number: 121637243
Start: 1495402
End: 1496019
Strand: Reverse
Name: 121637243
Synonym: BCG_1374c
Alternate gene names: NA
Gene position: 1496019-1495402 (Counterclockwise)
Preceding gene: 121637244
Following gene: 121637242
Centisome position: 34.2
GC content: 66.83
Gene sequence:
>618_bases GTGCGCAATGTGAGGCTATTTCGTGCGCTGCTGGGTGTCGACAAGCGCACCGTGATTGAGGACATCGAATTCGAGGAGGA TGACGCCGGAGACGGTGCGCGGGTGATCGCCCGGGTGCGGCCACGAAGTGCAGTGTTGCGCCGCTGTGGTCGCTGCGGTC GCAAGGCGTCCTGGTATGACCGCGGTGCGGGCCTGCGCCAATGGCGCAGTCTGGATTGGGGCACCGTCGAGGTGTTCTTG GAGGCCGAGGCGCCGCGGGTGAACTGCCCCACCCATGGGCCGACGGTGGTGGCGGTGCCGTGGGCGCGTCATCATGCCGG GCACACGTATGCTTTCGATGACACGGTGGCCTGGCTGGCGGTGGCGTGTTCGAAGACCGCGGTGTGCGAGTTGATGCGGA TCGCCTGGCGCACCGTCGGGGCGATCGTGGCCCGGGTCTGGGCCGACACCGAAAAGCGCATTGACCGGTTCGCGAACTTG CGCCGCATCGGTATCGATGAGATCTCCTACAAGCGCCACCACCGGTACCTGACGGTGGTCGTCGATCACGACAGCGGCCG GTTGGTGTGGGCCGCCCCGAGCCACCCTGGGCTTGTTCTTCGATGCCCTGGGCGCTGA
Upstream 100 bases:
>100_bases CACTTCCGTGGGTGAGTTTGTGTCCTGAGTAGGCGCACGTCGTTGTGGCTTAAGGTTTCTGGCTTGTCAAGGATCAGAAA CACAAGGAGCCGACAACGAC
Downstream 100 bases:
>100_bases GCGGGCCGCCCAGATTACTCACGTTTCGGCCGATGCCGCGGACTGGATCGCTGACGTGGTCACCGAGCGCTGCCCGGATG CGATTCAATGCGCCGATCCG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVEVFL EAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANL RRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPSHPGLVLRCPGR
Sequences:
>Translated_205_residues MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVEVFL EAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANL RRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPSHPGLVLRCPGR >Mature_205_residues MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVEVFL EAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANL RRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPSHPGLVLRCPGR
Specific function: Unknown
COG id: COG3464
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 12 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002560 [H]
Pfam domain/function: PF01610 Transposase_12 [H]
EC number: NA
Molecular weight: Translated: 23260; Mature: 23260
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD CCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHH RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA CCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCCCEEEEHHHHHHHH VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV HHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEE VDHDSGRLVWAAPSHPGLVLRCPGR EECCCCEEEEECCCCCCEEEECCCC >Mature Secondary Structure MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD CCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHH RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA CCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCCCEEEEHHHHHHHH VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV HHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEE VDHDSGRLVWAAPSHPGLVLRCPGR EECCCCEEEEECCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]