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The map label for this gene is oppB [C]

Identifier: 121637211

GI number: 121637211

Start: 1462764

End: 1463741

Strand: Reverse

Name: oppB [C]

Synonym: BCG_1342c

Alternate gene names: 121637211

Gene position: 1463741-1462764 (Counterclockwise)

Preceding gene: 121637218

Following gene: 121637210

Centisome position: 33.46

GC content: 64.83

Gene sequence:

>978_bases
ATGACGCGCTATCTGGCCCGCCGGTTGCTCAACTACCTGGTGCTGCTGGCGCTGGCGTCGTTTTTGACGTACTGCCTGAC
CTCGCTGGCGTTCTCGCCGCTGGAAAGCCTGATGCAACGCAGTCCGCGCCCACCGCAAGCGGTTATCGATGCCAAGGCAC
ACGATCTCGGCTTGGACAGACCCATACTGGCCCGCTACGCCAACTGGGTATCGCATGCCGTCCGTGGCGACTTCGGAACC
ACCATCACCGGCCAGCCTGTCGGTACCGAACTGGGGCGCCGGATCGGAGTCAGCCTGCGGCTGCTGGTCGTTGGATCGGT
ATTCGGCACGGTGGCCGGTGTGGTGATCGGGGCGTGGGGTGCCATCCGGCAGTACCGGCTCAGCGACCGCGTCATGACCA
CGCTGGCGCTGCTGGTGTTGAGCACACCGACGTTTGTGGTGGCCAACCTGTTGATCCTGGGCGCCCTGCGGGTCAACTGG
GCAGTGGGCATCCAGCTTTTCGACTACACCGGGGAGACGTCACCCGGCGTTGCCGGCGGGGTGTGGGATCGGCTAGGCGA
CCGGTTGCAGCATTTGATCCTGCCATCGCTGACGTTGGCGCTGGCGGCCGCCGCCGGGTTCAGCCGCTACCAGCGCAACG
CGATGCTGGATGTCCTCGGCCAGGATTTCATTCGCACCGCCCGCGCCAAGGGGCTGACCCGACGACGGGCCCTACTCAAG
CATGGCCTGCGAACGGCGCTAATACCGATGGCCACGCTGTTCGCCTACGGGGTGGCCGGGTTGGTCACCGGAGCGGTTTT
CGTCGAGAAGATCTTCGGCTGGCACGGCATGGGTGAATGGATGGTCCGCGGTATCTCGACTCAGGACACCAACATCGTCG
CGGCAATTACCGTGTTCTCCGGCGCGGTCGTGTTGCTGGCCGGTTTGCTCTCGGACGTGATCTACGCGGCTTTGGACCCG
AGGGTACGGGTGTCATGA

Upstream 100 bases:

>100_bases
CGGAACCATCCGGATCACGGGTGACCCCATCAACCGGCGCGCTGGCGGCACGCCATCGCCGGGCTCGCTACCCTGTCCCA
ATGCGACGCGGTGGTTGGGC

Downstream 100 bases:

>100_bases
CGGAATTCGCCTCGCGGCGCACCCTAGTGGTGCGCAGGTTCCTACGCAATCGGGCCGCGGTGGCGTCGCTGGCGGCGCTG
CTCCTGCTGTTCGTCAGCGC

Product: putative oligopeptide-transport integral membrane protein ABC transporter oppB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTRYLARRLLNYLVLLALASFLTYCLTSLAFSPLESLMQRSPRPPQAVIDAKAHDLGLDRPILARYANWVSHAVRGDFGT
TITGQPVGTELGRRIGVSLRLLVVGSVFGTVAGVVIGAWGAIRQYRLSDRVMTTLALLVLSTPTFVVANLLILGALRVNW
AVGIQLFDYTGETSPGVAGGVWDRLGDRLQHLILPSLTLALAAAAGFSRYQRNAMLDVLGQDFIRTARAKGLTRRRALLK
HGLRTALIPMATLFAYGVAGLVTGAVFVEKIFGWHGMGEWMVRGISTQDTNIVAAITVFSGAVVLLAGLLSDVIYAALDP
RVRVS

Sequences:

>Translated_325_residues
MTRYLARRLLNYLVLLALASFLTYCLTSLAFSPLESLMQRSPRPPQAVIDAKAHDLGLDRPILARYANWVSHAVRGDFGT
TITGQPVGTELGRRIGVSLRLLVVGSVFGTVAGVVIGAWGAIRQYRLSDRVMTTLALLVLSTPTFVVANLLILGALRVNW
AVGIQLFDYTGETSPGVAGGVWDRLGDRLQHLILPSLTLALAAAAGFSRYQRNAMLDVLGQDFIRTARAKGLTRRRALLK
HGLRTALIPMATLFAYGVAGLVTGAVFVEKIFGWHGMGEWMVRGISTQDTNIVAAITVFSGAVVLLAGLLSDVIYAALDP
RVRVS
>Mature_324_residues
TRYLARRLLNYLVLLALASFLTYCLTSLAFSPLESLMQRSPRPPQAVIDAKAHDLGLDRPILARYANWVSHAVRGDFGTT
ITGQPVGTELGRRIGVSLRLLVVGSVFGTVAGVVIGAWGAIRQYRLSDRVMTTLALLVLSTPTFVVANLLILGALRVNWA
VGIQLFDYTGETSPGVAGGVWDRLGDRLQHLILPSLTLALAAAAGFSRYQRNAMLDVLGQDFIRTARAKGLTRRRALLKH
GLRTALIPMATLFAYGVAGLVTGAVFVEKIFGWHGMGEWMVRGISTQDTNIVAAITVFSGAVVLLAGLLSDVIYAALDPR
VRVS

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yliabcd; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1787053, Length=324, Percent_Identity=32.7160493827161, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI1787497, Length=328, Percent_Identity=31.0975609756098, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1789965, Length=348, Percent_Identity=29.3103448275862, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1789888, Length=326, Percent_Identity=30.0613496932515, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=26.4925373134328, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787761, Length=298, Percent_Identity=32.5503355704698, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788504, Length=280, Percent_Identity=26.4285714285714, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1283_MYCTU (P66966)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   G70771
- RefSeq:   NP_215799.1
- RefSeq:   NP_335767.1
- ProteinModelPortal:   P66966
- EnsemblBacteria:   EBMYCT00000000074
- EnsemblBacteria:   EBMYCT00000069393
- GeneID:   886981
- GeneID:   924752
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1320
- KEGG:   mtu:Rv1283c
- TIGR:   MT1320
- TubercuList:   Rv1283c
- GeneTree:   EBGT00050000016002
- HOGENOM:   HBG724229
- OMA:   LWRRIGV
- ProtClustDB:   CLSK791079
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 35084; Mature: 34953

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x126e0f90)-; HASH(0x134e3eb4)-; HASH(0x157d9388)-; HASH(0x14dc6afc)-; HASH(0x154b8a14)-; HASH(0x1542af74)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYLARRLLNYLVLLALASFLTYCLTSLAFSPLESLMQRSPRPPQAVIDAKAHDLGLDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCCCC
PILARYANWVSHAVRGDFGTTITGQPVGTELGRRIGVSLRLLVVGSVFGTVAGVVIGAWG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
AIRQYRLSDRVMTTLALLVLSTPTFVVANLLILGALRVNWAVGIQLFDYTGETSPGVAGG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHH
VWDRLGDRLQHLILPSLTLALAAAAGFSRYQRNAMLDVLGQDFIRTARAKGLTRRRALLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGLRTALIPMATLFAYGVAGLVTGAVFVEKIFGWHGMGEWMVRGISTQDTNIVAAITVFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHH
GAVVLLAGLLSDVIYAALDPRVRVS
HHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure 
TRYLARRLLNYLVLLALASFLTYCLTSLAFSPLESLMQRSPRPPQAVIDAKAHDLGLDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCCCC
PILARYANWVSHAVRGDFGTTITGQPVGTELGRRIGVSLRLLVVGSVFGTVAGVVIGAWG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
AIRQYRLSDRVMTTLALLVLSTPTFVVANLLILGALRVNWAVGIQLFDYTGETSPGVAGG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHH
VWDRLGDRLQHLILPSLTLALAAAAGFSRYQRNAMLDVLGQDFIRTARAKGLTRRRALLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGLRTALIPMATLFAYGVAGLVTGAVFVEKIFGWHGMGEWMVRGISTQDTNIVAAITVFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHH
GAVVLLAGLLSDVIYAALDPRVRVS
HHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036