Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637117
Identifier: 121637117
GI number: 121637117
Start: 1358973
End: 1360589
Strand: Reverse
Name: 121637117
Synonym: BCG_1248c
Alternate gene names: NA
Gene position: 1360589-1358973 (Counterclockwise)
Preceding gene: 121637123
Following gene: 121637116
Centisome position: 31.1
GC content: 68.46
Gene sequence:
>1617_bases ATGCGGATCGCCGGCGTGGGGCTCGGCCAGTTGCTCCTGGCGCTGGATGCGACCGTGGTCAGCCTGGTGGACGCCCCGCG CGGCCTGGACCTGCCGGTGGCGTCGACGGCGCTGATCGATTCCGACGACGTGCGGCTGGGCCTGGCGGCCGCGGCGGGCT CGGCCGATGTGTTCTTCCTGATCGGGGTCACCGACGACGAGGCGGTGCGCTGGGTCGACGATCAGGCACGCCAACGGGCG CCGGTGGCGATCTTCGTCAAGCACCCGTCGGACTCGGTGGTGGCCGGGGCCGTCCGCGCCGGCTCGGCGGTGGTAGCCGT GGAGCCGCGGGCCCGCTGGGAACGGCTGTACCACTTGGTGAATCATGTCTTGGAGCATCATGGTGACCGGGCCGACCCCA CCGACGATTCCGGAACCGACCTGTTCGGGTTGGCACAGTCCCTGGCCGACCGCATCCACGGCATGATCAGCATCGAGGAC GCCCAGTCGCACGTGCTCGCCTACTCGGCCTCCAACGACGAGGCCGACGAGCTGCGTCGGCTGTCCATCCTGGGCCGCGC CGGCCCGCCCGAGCATCTGCAGTGGATAGGTCAATGGGGCATCTTCGATGCCCTGCGGGCCGGCCGTGAGGTGGTGCGGG TGGCCGAGCGCCCCGAGCTGGGGTTGCGTCCTCGGCTAGCCATCGGGATTCATCAGCCGGGGGTCGGTGCGCTGCGGCCA CCGGTGTTCGCCGGCACGATCTGGGTCCAGCAAGGCTCGCAGCCGTTGGCCGACGATGCCGAGGAGATGTTGCGGGGTGC TGCGGTGCTGGCCGCCCGGATCATGTCGCGACTGGCGACCCAGCCCAATACGCACGCGCTGCGGGTACAGCAACTACTGG GCCTGGCCGAGCTGAACGCAACCACAGCACCCGTCGACGTATCGACCATCGCCCGTGAACTCGGCGTCGCCGCCGAGGGC AACGCAACGCTGATCGGTTTCGACACCGCGGAAAACCGCGATACCGCAGTCCGCCATGTTCGGCTTGTTGACGTCATGGC ATTGAGCGCCAGCGCTTTTCGCCACGACGCTCAGGTTGCCGCCAACGGCTCACGGATCTATGTGCTGCTGCCCCAAACCA CGACCGGCCGAGCTGTCACCTCGTGGGTCCGCGGCACAATCAGCGCACTGCGCGCCGAGCTGGGAGTAGCACTACGGGCA GCCATCGCGGGGCCGGTCGCGGGACTTGCCGAAGTCAACCCGGCACGCGTCGAGGTGGATCGGGTACTCGAGAGTGCCGA GCGCCACCCGATCTTGGGGCAGGTGACATCGCTGGCCGAGGCACGCACCACCGTTCTGCTCGACGAAATCGTCACCCTGG TCGGCACCGACCAGCGGCTCGTCGATCCTCGGATACGTGACCTGGGCGCCCAGGATCCGGTGCTGGCTCAGACCCTGCGT GCCTACCTGGATGCCTTCGGCGACATCGGCGCCGCCGCACGGTCACTGCAAGTGCATCCCAACACCGTTCGCTACCGGAT AAGGCGGATCGAGCAGCTGTTGTCGACCTCGCTGGGCGATCCGGATGTGCGGCTGCTCTTTTCGCTGGGGCTGCGGGCCA TGGAACGCACGGCTTAG
Upstream 100 bases:
>100_bases GGGTGATCGCGTCCATGCCTGCCAGCATCCCCGCCCAGGCATCGCAAATGTTTGGCCGATCAGACAAGATCTGGCGGACT TGCTAGTAGGATCGGACAAC
Downstream 100 bases:
>100_bases CAACTCGACCGTGACGCCCCTCACGGCGCCCCTGCGTACACCGACTTCGACTCTGCGTCAACCTGTTTCAGCACATGCAC AGCATTGCAGAACGTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: CdaR Family Transcriptional Regulator; Transcriptional Regulator CdaR; Transcriptional Regulator; PucR Family Transcriptional Regulator; Regulator Of Polyketide Synthase Expression- Like Protein
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MRIAGVGLGQLLLALDATVVSLVDAPRGLDLPVASTALIDSDDVRLGLAAAAGSADVFFLIGVTDDEAVRWVDDQARQRA PVAIFVKHPSDSVVAGAVRAGSAVVAVEPRARWERLYHLVNHVLEHHGDRADPTDDSGTDLFGLAQSLADRIHGMISIED AQSHVLAYSASNDEADELRRLSILGRAGPPEHLQWIGQWGIFDALRAGREVVRVAERPELGLRPRLAIGIHQPGVGALRP PVFAGTIWVQQGSQPLADDAEEMLRGAAVLAARIMSRLATQPNTHALRVQQLLGLAELNATTAPVDVSTIARELGVAAEG NATLIGFDTAENRDTAVRHVRLVDVMALSASAFRHDAQVAANGSRIYVLLPQTTTGRAVTSWVRGTISALRAELGVALRA AIAGPVAGLAEVNPARVEVDRVLESAERHPILGQVTSLAEARTTVLLDEIVTLVGTDQRLVDPRIRDLGAQDPVLAQTLR AYLDAFGDIGAAARSLQVHPNTVRYRIRRIEQLLSTSLGDPDVRLLFSLGLRAMERTA
Sequences:
>Translated_538_residues MRIAGVGLGQLLLALDATVVSLVDAPRGLDLPVASTALIDSDDVRLGLAAAAGSADVFFLIGVTDDEAVRWVDDQARQRA PVAIFVKHPSDSVVAGAVRAGSAVVAVEPRARWERLYHLVNHVLEHHGDRADPTDDSGTDLFGLAQSLADRIHGMISIED AQSHVLAYSASNDEADELRRLSILGRAGPPEHLQWIGQWGIFDALRAGREVVRVAERPELGLRPRLAIGIHQPGVGALRP PVFAGTIWVQQGSQPLADDAEEMLRGAAVLAARIMSRLATQPNTHALRVQQLLGLAELNATTAPVDVSTIARELGVAAEG NATLIGFDTAENRDTAVRHVRLVDVMALSASAFRHDAQVAANGSRIYVLLPQTTTGRAVTSWVRGTISALRAELGVALRA AIAGPVAGLAEVNPARVEVDRVLESAERHPILGQVTSLAEARTTVLLDEIVTLVGTDQRLVDPRIRDLGAQDPVLAQTLR AYLDAFGDIGAAARSLQVHPNTVRYRIRRIEQLLSTSLGDPDVRLLFSLGLRAMERTA >Mature_538_residues MRIAGVGLGQLLLALDATVVSLVDAPRGLDLPVASTALIDSDDVRLGLAAAAGSADVFFLIGVTDDEAVRWVDDQARQRA PVAIFVKHPSDSVVAGAVRAGSAVVAVEPRARWERLYHLVNHVLEHHGDRADPTDDSGTDLFGLAQSLADRIHGMISIED AQSHVLAYSASNDEADELRRLSILGRAGPPEHLQWIGQWGIFDALRAGREVVRVAERPELGLRPRLAIGIHQPGVGALRP PVFAGTIWVQQGSQPLADDAEEMLRGAAVLAARIMSRLATQPNTHALRVQQLLGLAELNATTAPVDVSTIARELGVAAEG NATLIGFDTAENRDTAVRHVRLVDVMALSASAFRHDAQVAANGSRIYVLLPQTTTGRAVTSWVRGTISALRAELGVALRA AIAGPVAGLAEVNPARVEVDRVLESAERHPILGQVTSLAEARTTVLLDEIVTLVGTDQRLVDPRIRDLGAQDPVLAQTLR AYLDAFGDIGAAARSLQVHPNTVRYRIRRIEQLLSTSLGDPDVRLLFSLGLRAMERTA
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57504; Mature: 57504
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAGVGLGQLLLALDATVVSLVDAPRGLDLPVASTALIDSDDVRLGLAAAAGSADVFFL CEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEE IGVTDDEAVRWVDDQARQRAPVAIFVKHPSDSVVAGAVRAGSAVVAVEPRARWERLYHLV EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHH NHVLEHHGDRADPTDDSGTDLFGLAQSLADRIHGMISIEDAQSHVLAYSASNDEADELRR HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHH LSILGRAGPPEHLQWIGQWGIFDALRAGREVVRVAERPELGLRPRLAIGIHQPGVGALRP HHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC PVFAGTIWVQQGSQPLADDAEEMLRGAAVLAARIMSRLATQPNTHALRVQQLLGLAELNA CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC TTAPVDVSTIARELGVAAEGNATLIGFDTAENRDTAVRHVRLVDVMALSASAFRHDAQVA CCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE ANGSRIYVLLPQTTTGRAVTSWVRGTISALRAELGVALRAAIAGPVAGLAEVNPARVEVD ECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHH RVLESAERHPILGQVTSLAEARTTVLLDEIVTLVGTDQRLVDPRIRDLGAQDPVLAQTLR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCHHHHHHHH AYLDAFGDIGAAARSLQVHPNTVRYRIRRIEQLLSTSLGDPDVRLLFSLGLRAMERTA HHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIAGVGLGQLLLALDATVVSLVDAPRGLDLPVASTALIDSDDVRLGLAAAAGSADVFFL CEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEE IGVTDDEAVRWVDDQARQRAPVAIFVKHPSDSVVAGAVRAGSAVVAVEPRARWERLYHLV EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHH NHVLEHHGDRADPTDDSGTDLFGLAQSLADRIHGMISIEDAQSHVLAYSASNDEADELRR HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHH LSILGRAGPPEHLQWIGQWGIFDALRAGREVVRVAERPELGLRPRLAIGIHQPGVGALRP HHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC PVFAGTIWVQQGSQPLADDAEEMLRGAAVLAARIMSRLATQPNTHALRVQQLLGLAELNA CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC TTAPVDVSTIARELGVAAEGNATLIGFDTAENRDTAVRHVRLVDVMALSASAFRHDAQVA CCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE ANGSRIYVLLPQTTTGRAVTSWVRGTISALRAELGVALRAAIAGPVAGLAEVNPARVEVD ECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHH RVLESAERHPILGQVTSLAEARTTVLLDEIVTLVGTDQRLVDPRIRDLGAQDPVLAQTLR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCHHHHHHHH AYLDAFGDIGAAARSLQVHPNTVRYRIRRIEQLLSTSLGDPDVRLLFSLGLRAMERTA HHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA