Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637060
Identifier: 121637060
GI number: 121637060
Start: 1283032
End: 1284387
Strand: Reverse
Name: 121637060
Synonym: BCG_1189c
Alternate gene names: NA
Gene position: 1284387-1283032 (Counterclockwise)
Preceding gene: 121637061
Following gene: 121637059
Centisome position: 29.36
GC content: 64.9
Gene sequence:
>1356_bases ATGTGTTCCACTCGGGAGGAGATCACGGAGGCCTTCGCGTCATTGGCTACCGCGCTGTCCCGCGTGCTGGGGCTGACCTT TGACGCATTGACCACCCCGGAGCGCCTGGCGCTGCTGGAGCACTGCGAGACCGCGCGACGCCAGCTGCCCAGCGTCGAAC ACACGTTGATCAATCAGATCGGCGAACAATCCACCGAGGAGGAGCTGGGCGGCAAGCTGGGATTGACGCTGGCCGACCGG TTGCGCATCACCCGCAGCGAGGCCAAGCGGCGAGTGGCCGAGGCCGCCGACCTTGGCCAGCGCCGTGCGCTGACCGGCGA GCCGCTGCCACCGCTACTCACCGCCACCGCAAAGGCACAGCGCCACGGGTTAATTGGTGACGGCCATGTTGAAGTAATCC GTGCTTTCGTGCACCGCCTACCATCCTGGGTAGACCTCAAGACCCTGGAGAAGGCCGAACGGGACTTGGCTAAGCAGGCC ACCCAGTACCGTCCCGACCAGCTGGCCAAATTGGCCGCGCGGATCATGGACTGCCTCAACCCCGATGGCGACTACACCGA CGAGGACCGCGCCCGCCGCCGCGGCTTGACGTTAGGAAAGCAAGATGTCGATGGGATGTCGCGGCTCAGCGGATATGTGA CCCCCGAGCTGCGCGCCACTATCGAGGCGGTGTGGGCCAAGCTGGCCGCCCCGGGTATGTGCAACCCCGAGCAGAAGGCA CCGTGTGTGAACGGCGCGCCCTCGAAGGAGCAGGCGCGGCGAGACACCCGCAGCTGCCCACAGCGGAACCACGACGCGCT CAACGCCGGATTACGTAGTTTGTTGACAAGTGGCAATCTGGGCCAGCACAACGGATTACCGGCCAGCATCATCGTGACCA CCACGCTGAAGGACTTGGAGGCCGCGGCCGGCGCGGGCCTCACCGGCGGGGGTACGATCTTGCCCATATCGGATGTGATC CGGCTGGCCCGCCACGCAAACCACTACCTCGCGATATTCGATCGAGGCAAGGCCCTGGCGCTCTACCACACCAAGCGCCT GGCCTCCCCGGCGCAGCGAATTATGTTGTACGCCAAGGACAGTGGCTGCAGCGCACCTGGTTGCGACGTGCCCGGCTATT ACTGTGAAGTCCATCATGTCACGCCGTACGCCCAGTGCCGCAACACCGACGTCAATGACCTGACACTCGGCTGCGGTGGC CATCATCCGTTAGCCGAACGTGGCTGGACGACCCGCAAGAACGCCCACGGCGACACCGAGTGGCTACCGCCGCCACATCT CGACCACGGCCAACCTCGAGTCAATACGTTCCATCACCCGGAAAAGCTCCTGGCAGACGACGAAGGCGACCCGTAG
Upstream 100 bases:
>100_bases CGCCCGACGCCACAGCAGACAACGAAACCCCTTATATTACTGTGGTTTCAGCAGGCTCTGGGCAAGCATTGTTGTCGGTG CCTGCACATAGCATTCAGTC
Downstream 100 bases:
>100_bases CGTTAGGCGGGGGAGCCGGTCGAACCAAGCCGTTGGGCCGGTGCGCTGTCCACGCCGCCAGCCACCATCACCGGCAGCCG GCGTTGTCTCGCAGCATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQSTEEELGGKLGLTLADR LRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQA TQYRPDQLAKLAARIMDCLNPDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAGAGLTGGGTILPISDVI RLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGG HHPLAERGWTTRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLADDEGDP
Sequences:
>Translated_451_residues MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQSTEEELGGKLGLTLADR LRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQA TQYRPDQLAKLAARIMDCLNPDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAGAGLTGGGTILPISDVI RLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGG HHPLAERGWTTRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLADDEGDP >Mature_451_residues MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQSTEEELGGKLGLTLADR LRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQA TQYRPDQLAKLAARIMDCLNPDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAGAGLTGGGTILPISDVI RLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGG HHPLAERGWTTRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLADDEGDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 49203; Mature: 49203
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHCC PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLE CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHH AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD HHHCCCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHHCHHHHEEEEECC SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE CCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCC WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHCC PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLE CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHH AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD HHHCCCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHHCHHHHEEEEECC SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE CCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCC WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]