Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is ppdK [H]
Identifier: 121637059
GI number: 121637059
Start: 1281347
End: 1282819
Strand: Reverse
Name: ppdK [H]
Synonym: BCG_1188c
Alternate gene names: 121637059
Gene position: 1282819-1281347 (Counterclockwise)
Preceding gene: 121637060
Following gene: 121637058
Centisome position: 29.32
GC content: 66.6
Gene sequence:
>1473_bases ATGACTCGTATCACCCGAGCCAATGGTTGCCCCGACGGAACTCTCGAAAACGCCGTTGTGGCGCTGGACGGCGGCGCGAA CTACCCACGCGAGATCCTGGGCAACAAAGGCCACGGCATCGACATGATGCGCCGGCACCATCTGCCGGTGCCGCCTGCAT TCTGCATTACCACCGAGGTGGGCGTGCGCTATCTCGCCGCGCCCGAATCCACGATCGCCGCGATCTGGGATGACGTGCTG GATCGGATGAGCTGGCTGGAAACAGAAACCTCGTGCACGTTCGGCCGTGGCCCGAATCCGCTGCTGGTCAGCGTGCGCTC GGGAGCCACCCAGTCGATGCCCGGCATGATGGACACGATTCTGGACGTGGGCATGACCGACGCGGTCGAACGAGTACTTG CCAGGCCGGGTGCCGCCGACTTCGCCCACGACACCAGACGGCGATTCACCAGCATGTATCGGCGCATCGTCGGCAGCGCC GGTCCCATTACCGACGACCCGTATGCCCAGTTGCGCGCGAGCATCGAGGCGGTATTCGCCTCCTGGAACTCACCTCGCGC CGTTGCCTATCGCGACCATCACGGCCTCGACGACCAAGGCGGTACGGCGGTGGTGGTGCAGGCGATGGTATTCGGCAACC TCACCGCGAACTCGGGCGCCGGGGTGCTGTCCTCACGCAACCCGATCACCGGAGCCAACGAACCGTTCGGCGAATGGCTA CCCGGCGGCCAAGGCGACGACGTGGTGTCCGGATTGGTCGCCGTCGCACCGATCACCGCCCTGCGCGACCAGCAGCCGGC CGTCTACGACCAACTGATGGCGGCCGCCCGCAGTTTGGAGCGCATGGCAGGCGACGTCCAGGAGATCGAATTCACCGTGG AGGACAGCCAGCTGTGGCTGCTGCAGACCCGCGGGGCGGAACGCTCGGCGCAGGCCGCCGTGCGACTGGCGCTGCAACTG CATCACGAGGGACTCATCGACGACACCGAGACACTGCGCCGGGTGACTCCGACGCACATCGAGACTTTGCTACGGCCGTC GCTGCAGCCGGAAACACGGTTGGCCGCACCGCTTTTGGCCAAGGGCCTGCCCGCTTGCCCGGGCGTGGTATCCGGGACCG CCTACACCGAGGTGGACGAGGCGCTGGACGCTGCGGACCGGGGCGAGCCGGTCATCTTGGTGCGAGATCACACCAGACCG GAGGACGTCATGGGCATGCTTGCCGCGCAAGGCATTGTCACCGAGGTGGGGGGTGCCGCCAGTCATGCGGCGGTGGTTAG CCGCGAGCTCGGTCGAGTGGCCGTGGTGGGTTGCGGTCCCGGGGTCGCGGCGGCACTGGCCGGCAAGGAGATCACCGTCG ACGGCTATGAAGGCGAAGTGCGCCAAGGCGTTCTGGCATTGTCTGCCTGGTCGGAAAGTGACACGCCGGAGTTGCGCGAG CTGGCCGACATCGCGCAACGGATCAGTTCATGA
Upstream 100 bases:
>100_bases CCAGACACAAGCTGAGTAGTCCGACCGCTGACCAAGGCGCCCCCTGTGGGCCCACAGTGGGCGGTCTGGCGTTGCCCATA AGTAGCATCAAGGGGTGCCC
Downstream 100 bases:
>100_bases GCGAGTTGACGGTACTGCAGGCCGTGCGGCTCAAGGGCCGGGTGATCACCACCGACCTGGCGCAGACCTTGGGTGAAGAC CTTGCCGACGTCGCCGCGAC
Product: pyruvate phosphate dikinase
Products: NA
Alternate protein names: Pyruvate, orthophosphate dikinase [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MTRITRANGCPDGTLENAVVALDGGANYPREILGNKGHGIDMMRRHHLPVPPAFCITTEVGVRYLAAPESTIAAIWDDVL DRMSWLETETSCTFGRGPNPLLVSVRSGATQSMPGMMDTILDVGMTDAVERVLARPGAADFAHDTRRRFTSMYRRIVGSA GPITDDPYAQLRASIEAVFASWNSPRAVAYRDHHGLDDQGGTAVVVQAMVFGNLTANSGAGVLSSRNPITGANEPFGEWL PGGQGDDVVSGLVAVAPITALRDQQPAVYDQLMAAARSLERMAGDVQEIEFTVEDSQLWLLQTRGAERSAQAAVRLALQL HHEGLIDDTETLRRVTPTHIETLLRPSLQPETRLAAPLLAKGLPACPGVVSGTAYTEVDEALDAADRGEPVILVRDHTRP EDVMGMLAAQGIVTEVGGAASHAAVVSRELGRVAVVGCGPGVAAALAGKEITVDGYEGEVRQGVLALSAWSESDTPELRE LADIAQRISS
Sequences:
>Translated_490_residues MTRITRANGCPDGTLENAVVALDGGANYPREILGNKGHGIDMMRRHHLPVPPAFCITTEVGVRYLAAPESTIAAIWDDVL DRMSWLETETSCTFGRGPNPLLVSVRSGATQSMPGMMDTILDVGMTDAVERVLARPGAADFAHDTRRRFTSMYRRIVGSA GPITDDPYAQLRASIEAVFASWNSPRAVAYRDHHGLDDQGGTAVVVQAMVFGNLTANSGAGVLSSRNPITGANEPFGEWL PGGQGDDVVSGLVAVAPITALRDQQPAVYDQLMAAARSLERMAGDVQEIEFTVEDSQLWLLQTRGAERSAQAAVRLALQL HHEGLIDDTETLRRVTPTHIETLLRPSLQPETRLAAPLLAKGLPACPGVVSGTAYTEVDEALDAADRGEPVILVRDHTRP EDVMGMLAAQGIVTEVGGAASHAAVVSRELGRVAVVGCGPGVAAALAGKEITVDGYEGEVRQGVLALSAWSESDTPELRE LADIAQRISS >Mature_489_residues TRITRANGCPDGTLENAVVALDGGANYPREILGNKGHGIDMMRRHHLPVPPAFCITTEVGVRYLAAPESTIAAIWDDVLD RMSWLETETSCTFGRGPNPLLVSVRSGATQSMPGMMDTILDVGMTDAVERVLARPGAADFAHDTRRRFTSMYRRIVGSAG PITDDPYAQLRASIEAVFASWNSPRAVAYRDHHGLDDQGGTAVVVQAMVFGNLTANSGAGVLSSRNPITGANEPFGEWLP GGQGDDVVSGLVAVAPITALRDQQPAVYDQLMAAARSLERMAGDVQEIEFTVEDSQLWLLQTRGAERSAQAAVRLALQLH HEGLIDDTETLRRVTPTHIETLLRPSLQPETRLAAPLLAKGLPACPGVVSGTAYTEVDEALDAADRGEPVILVRDHTRPE DVMGMLAAQGIVTEVGGAASHAAVVSRELGRVAVVGCGPGVAAALAGKEITVDGYEGEVRQGVLALSAWSESDTPELREL ADIAQRISS
Specific function: Catalyzes the reversible phosphorylation of pyruvate and phosphate. In E.histolytica and C.symbiosus, PPDK functions in the direction of ATP synthesis [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=329, Percent_Identity=27.9635258358663, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR010121 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.1 [H]
Molecular weight: Translated: 52073; Mature: 51942
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRITRANGCPDGTLENAVVALDGGANYPREILGNKGHGIDMMRRHHLPVPPAFCITTEV CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCHHHHHHCCCCCCCHHEEEHHH GVRYLAAPESTIAAIWDDVLDRMSWLETETSCTFGRGPNPLLVSVRSGATQSMPGMMDTI CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHH LDVGMTDAVERVLARPGAADFAHDTRRRFTSMYRRIVGSAGPITDDPYAQLRASIEAVFA HHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH SWNSPRAVAYRDHHGLDDQGGTAVVVQAMVFGNLTANSGAGVLSSRNPITGANEPFGEWL CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCC PGGQGDDVVSGLVAVAPITALRDQQPAVYDQLMAAARSLERMAGDVQEIEFTVEDSQLWL CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCEEEE LQTRGAERSAQAAVRLALQLHHEGLIDDTETLRRVTPTHIETLLRPSLQPETRLAAPLLA EEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH KGLPACPGVVSGTAYTEVDEALDAADRGEPVILVRDHTRPEDVMGMLAAQGIVTEVGGAA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCH SHAAVVSRELGRVAVVGCGPGVAAALAGKEITVDGYEGEVRQGVLALSAWSESDTPELRE HHHHHHHHHCCCEEEEECCCCHHHHHCCCEEEEECCCCHHHHCEEEEEECCCCCCHHHHH LADIAQRISS HHHHHHHHCC >Mature Secondary Structure TRITRANGCPDGTLENAVVALDGGANYPREILGNKGHGIDMMRRHHLPVPPAFCITTEV CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCHHHHHHCCCCCCCHHEEEHHH GVRYLAAPESTIAAIWDDVLDRMSWLETETSCTFGRGPNPLLVSVRSGATQSMPGMMDTI CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHH LDVGMTDAVERVLARPGAADFAHDTRRRFTSMYRRIVGSAGPITDDPYAQLRASIEAVFA HHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH SWNSPRAVAYRDHHGLDDQGGTAVVVQAMVFGNLTANSGAGVLSSRNPITGANEPFGEWL CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCC PGGQGDDVVSGLVAVAPITALRDQQPAVYDQLMAAARSLERMAGDVQEIEFTVEDSQLWL CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCEEEE LQTRGAERSAQAAVRLALQLHHEGLIDDTETLRRVTPTHIETLLRPSLQPETRLAAPLLA EEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH KGLPACPGVVSGTAYTEVDEALDAADRGEPVILVRDHTRPEDVMGMLAAQGIVTEVGGAA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCH SHAAVVSRELGRVAVVGCGPGVAAALAGKEITVDGYEGEVRQGVLALSAWSESDTPELRE HHHHHHHHHCCCEEEEECCCCHHHHHCCCEEEEECCCCHHHHCEEEEEECCCCCCHHHHH LADIAQRISS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2176881; 6257292; 11695893; 11468288; 8610096; 9753432 [H]