Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637058
Identifier: 121637058
GI number: 121637058
Start: 1280745
End: 1281350
Strand: Reverse
Name: 121637058
Synonym: BCG_1187c
Alternate gene names: NA
Gene position: 1281350-1280745 (Counterclockwise)
Preceding gene: 121637059
Following gene: 121637055
Centisome position: 29.29
GC content: 65.35
Gene sequence:
>606_bases ATGAGCGAGTTGACGGTACTGCAGGCCGTGCGGCTCAAGGGCCGGGTGATCACCACCGACCTGGCGCAGACCTTGGGTGA AGACCTTGCCGACGTCGCCGCGACCGTCGACAGGCTGACCGCGGCCGGCCTCCTGGTCGACGCCACGCCGTTGCGGATCA GTCCCAGCGGCCGGATGAGGCTCGACGACTTGCTTGCCGAGGAGCGCAACCGGGCCGATTCGACCGTGCTGGCTGCCGCT TACCGCGATTTCCGTTCCGTCAACGCCGATTTCAAGAGGCTGGTCACCGACTGGCAGCTCAAGGGCGAAAAGCCTAACAC ACACGACGACGCCGAATACGACGCCGCGGTGCTGTCCCGCCTCGATGGCGTACACCGGCGGGTGGGCCCGATCATCGGTA CGGTGGCCATGCAGCTGCCGCGGTTGAGCAGGTACCCGGTGAAATTGCGTGCGGCGCTGGACAAGGTCAAAGCGGGCGAC ATCGCCTGGCTGACGCGCCCACTCATCGACTCCTACCACACCGTGTGGTTCGAACTACACGAGGAGCTGATCCAGGCCGT CGGGCTGACACGAGACGAAGCGGCTAAATCCGGTGATGCCCAGTAG
Upstream 100 bases:
>100_bases AAGGCGAAGTGCGCCAAGGCGTTCTGGCATTGTCTGCCTGGTCGGAAAGTGACACGCCGGAGTTGCGCGAGCTGGCCGAC ATCGCGCAACGGATCAGTTC
Downstream 100 bases:
>100_bases TTTTCACTGCAGAGCCGCGTCCAGCAGCCGCATGTAGGCGTCGATGTCAGACACCGCAGACTCGGCCGCGTGCACACTGA TCGCGACGGTATCACCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSELTVLQAVRLKGRVITTDLAQTLGEDLADVAATVDRLTAAGLLVDATPLRISPSGRMRLDDLLAEERNRADSTVLAAA YRDFRSVNADFKRLVTDWQLKGEKPNTHDDAEYDAAVLSRLDGVHRRVGPIIGTVAMQLPRLSRYPVKLRAALDKVKAGD IAWLTRPLIDSYHTVWFELHEELIQAVGLTRDEAAKSGDAQ
Sequences:
>Translated_201_residues MSELTVLQAVRLKGRVITTDLAQTLGEDLADVAATVDRLTAAGLLVDATPLRISPSGRMRLDDLLAEERNRADSTVLAAA YRDFRSVNADFKRLVTDWQLKGEKPNTHDDAEYDAAVLSRLDGVHRRVGPIIGTVAMQLPRLSRYPVKLRAALDKVKAGD IAWLTRPLIDSYHTVWFELHEELIQAVGLTRDEAAKSGDAQ >Mature_200_residues SELTVLQAVRLKGRVITTDLAQTLGEDLADVAATVDRLTAAGLLVDATPLRISPSGRMRLDDLLAEERNRADSTVLAAAY RDFRSVNADFKRLVTDWQLKGEKPNTHDDAEYDAAVLSRLDGVHRRVGPIIGTVAMQLPRLSRYPVKLRAALDKVKAGDI AWLTRPLIDSYHTVWFELHEELIQAVGLTRDEAAKSGDAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22198; Mature: 22066
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELTVLQAVRLKGRVITTDLAQTLGEDLADVAATVDRLTAAGLLVDATPLRISPSGRMR CCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCH LDDLLAEERNRADSTVLAAAYRDFRSVNADFKRLVTDWQLKGEKPNTHDDAEYDAAVLSR HHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LDGVHRRVGPIIGTVAMQLPRLSRYPVKLRAALDKVKAGDIAWLTRPLIDSYHTVWFELH HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EELIQAVGLTRDEAAKSGDAQ HHHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure SELTVLQAVRLKGRVITTDLAQTLGEDLADVAATVDRLTAAGLLVDATPLRISPSGRMR CHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCH LDDLLAEERNRADSTVLAAAYRDFRSVNADFKRLVTDWQLKGEKPNTHDDAEYDAAVLSR HHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LDGVHRRVGPIIGTVAMQLPRLSRYPVKLRAALDKVKAGDIAWLTRPLIDSYHTVWFELH HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EELIQAVGLTRDEAAKSGDAQ HHHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA