Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636998
Identifier: 121636998
GI number: 121636998
Start: 1223809
End: 1225572
Strand: Reverse
Name: 121636998
Synonym: BCG_1127c
Alternate gene names: NA
Gene position: 1225572-1223809 (Counterclockwise)
Preceding gene: 121636999
Following gene: 121636997
Centisome position: 28.02
GC content: 64.8
Gene sequence:
>1764_bases ATGACGGAACCGGCTGCAGCGACGACCACCAACGCCAGCGACGAACCAGCTACCGGCGCTGAGCAGGCGGTCGACACCGC AGCAACTCCACAAACCCCTGAACCGCAACCGATCCGCAGCACTTGGTGGATTCGCCACTACACATTCACCGGCACCGCGA TGGGCCTCGTTTTCGTGTGGTTCTCGATGACGCCGTCGCTGCTGCCGCGTGGTCCGCTGTTTCAGGGACTGGTCAGCGGA ATCTGCGGCGCCTTCGGATACGGCTTGGGAGTCTTCGCCGTCTGGCTGGTCCGCTACATGCGCTCGCACAATTCCAGCCC GCCGCCACCACGCTGGGCGTGGCCGCCGCTGATCGCAGTCGGCGCGGTCGGCATGGTGGGTATGGCAGTGCAGTTTCATG TCTGGCAAGACGATGTGCGCGACCTAATGGGTGTCGAGCACCTGCGGTGGTACGACTACCCGCTGGCCGCCGCATTGTCG CTGGTCGTGCTGTTCACGCTGGTCGAAATCGGCCAGTTCATCCGATGGCTGTTCCGTTTTCTGGTGGGACAGGTCGATCG CATTGCGCCATTCCGAGTTTCGGCGGCCATTGTGGTGGTGCTGCTCGTGGTGCTGACCATCACACTGCTCAACGGTGTGG TGCTCAAGTTCGCGATGAATTCCATGAACAGCACGTTCGCTGCGGTCAACAATGAGATGAATCCGGATTCGGCACCGCCG AAAACCCCGCTGCGATCGGGTGGCCCGGGATCGCTGGTGTCGTGGGAGTCGCTGGGCCATCAGGGCCGAATTTTCGTCCA CAGCGGTCCCACCATCGCCGACCTCACCGCGTTCAACGGCACCCCGGCCGTCGAGCCGATCCGAACCTATGCGGGGTTGA ACTCGGCGGACGGCATCATGGCCACCGCGGAGCTGGCGGCGCGCGAGCTAGCGCGCACCGGTGGCTTGCGCCGCGCCGTT GTGGCAGTGGCCACGAGCACCGGAACCGGTTGGATCAACGAGGCGGAAGCCTCCGCGCTGGAGTACATGTACAACGGCGA TACCGCGATCGTGAGCATGCAGTATTCGTTCTTGCCGAGCTGGCTGTCTTTCCTGGTGGACAAGGAGAATGCCCGGCACG CCGGCGAGGCGCTGTTCGAGGCGGTCGACAAGCTGATCCGTCAACTGCCCGAGTCGCAGCGCCCGAAGCTGGTCGTGTTC GGCGAGAGCCTGGGATCGTTCGGCGGTGAAGCGCCGTTCATGAACCTCAACAACATCCTCGCCCGCACCGACGGCGCGTT GTTCAGCGGACCGACGTTCAACAACACCGTTTGGAACTCCTTGACTGCGAACCGCGATGCCGGATCACCGCAGTGGCTGC CCATCTACGACGACGGCCGCAACGTGCGTTTCGTGGCCCGCGCACGCGACCTGCAACGCCCTGATGCGCCGTGGGGCAGA CTGCGGGTGGTGTATCTGCAGCATGCCTCTGATCCGATCGCCTGGTGGACTCCCCGCCTGCTGTTTCGGGAGCCGGACTG GCTGCGGGAGCAACGGGGCTACGACGTCCTTCCCCAGACACGCTGGATCCCGGTGGTGACGTTCGTCCAGGTTTCGGCCG ATATGGCGGTGGCTACGCATGTGCCGGACGGGCATGGTCACCGCTACGTCGCCACCGTGGCCGACGGCTGGGCCGCGGTG CTCTCGCCGCCCGGCTGGACACAGCAGAAGACGGAGCGGCTGCAGCCATTGCTGCACGCCAACGCCAAGCCCTTCGGCTC GTAG
Upstream 100 bases:
>100_bases TCTACGAACGCCGGCTTTTCCATTCGGCTTTCGCGACCGAAGACCAATCCGAAGGTATGGCAGCGTTCATCGAGAAACGC GCTCCCCAGTTCACCCACCG
Downstream 100 bases:
>100_bases GGCGGGCAGCGGGTCGGCCGGTTTGGCGTGCGCCGTCGGCGTGGCGGCTAGCCCGAGCCCATATCGATGGACGACAAGAC GGTGTTTGTCTAGGTGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSG ICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALS LVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAV VAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVF GESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR LRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAV LSPPGWTQQKTERLQPLLHANAKPFGS
Sequences:
>Translated_587_residues MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSG ICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALS LVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAV VAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVF GESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR LRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAV LSPPGWTQQKTERLQPLLHANAKPFGS >Mature_586_residues TEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGI CGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSL VVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPK TPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVV AVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFG ESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRL RVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVL SPPGWTQQKTERLQPLLHANAKPFGS
Specific function: Unknown
COG id: COG4425
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64358; Mature: 64227
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHH FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV HHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF HHHHHHHHHEEEEECHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCC KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM CCCCCCCCCCCEEEHHHCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCCHH ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHEECCCEEEEEEEHHHHHH WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR HHCCCCEECCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHCCCCCCCCCC LRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH EEEEEEECCCCCCHHCCCHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEEECCCEEEEEE VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS CCCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHH FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV HHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF HHHHHHHHHEEEEECHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCC KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM CCCCCCCCCCCEEEHHHCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCCHH ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHEECCCEEEEEEEHHHHHH WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR HHCCCCEECCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHCCCCCCCCCC LRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH EEEEEEECCCCCCHHCCCHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEEECCCEEEEEE VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS CCCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA