Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636808
Identifier: 121636808
GI number: 121636808
Start: 1013219
End: 1014241
Strand: Direct
Name: 121636808
Synonym: BCG_0937
Alternate gene names: NA
Gene position: 1013219-1014241 (Clockwise)
Preceding gene: 121636805
Following gene: 121636809
Centisome position: 23.16
GC content: 63.34
Gene sequence:
>1023_bases ATGGACAGGACGCGCATAGTTCGGCGGTGGCGCCGCAACATGGACGTGGCCGACGACGCCGAGTACGTGGAAATGCTGGC CACACTGTCCGAGGGGTCTGTGCGGCGGAATTTCAACCCGTACACCGATATCGACTGGGAGTCGCCGGAGTTCGCCGTCA CGGACAACGATCCCCGGTGGATCCTCCCGGCGACCGATCCGTTGGGCCGCCACCCCTGGTACCAGGCGCAGTCGCGGGAA CGCCAGATCGAGATCGGGATGTGGCGCCAGGCCAACGTGGCCAAGGTCGGGCTGCACTTCGAATCCATCCTGATTCGCGG CCTGATGAACTACACGTTCTGGATGCCCAACGGCTCACCGGAATACCGGTATTGCCTGCACGAATCGGTCGAAGAGTGCA ACCACACCATGATGTTCCAGGAGATGGTCAACCGTGTCGGCGCGGACGTTCCGGGGCTGCCACGGCGGCTGCGGTGGGTT TCACCGCTGGTTCCGCTGGTGGCCGGACCATTGCCGGTGGCCTTCTTCATCGGCGTGCTCGCTGGGGAGGAGCCCATCGA CCACACGCAAAAGAACGTGTTGCGCGAAGGCAAGTCGCTGCATCCGATCATGGAACGAGTGATGTCCATTCACGTGGCCG AGGAAGCGCGGCACATCTCGTTCGCCCACGAGTACTTGCGTAAGCGGCTGCCGCGCCTGATCCGGATGCAGCGGTTCTGG ATCTCGCTCTACTTCCCCCTGACGATGCGGTCGTTGTGCAACGCGATCGTGGTGCCGCCCAAGGCATTCTGGGAGGAATT CGACATCCCGCGCGAGGTCAAGAAGGAGTTGTTCTTCGGCTCGCCGGAGTCGCGAAAGTGGTTGTGCGACATGTTTGCCG ACGCCCGCATGCTGGCCCACGATACCGGATTGATGAACCCGATCGCTCGGCTAGTGTGGCGACTCTGCAAGATCGACGGC AAGCCGTCGCGCTACCGCAGCGAGCCGCAGCGTCAGCACTTGGCTGCCGCGCCGGCCGCATAG
Upstream 100 bases:
>100_bases GGCTGGGTCATAGTGTCGCCAAGGGTCTGGATAATTCCCGGTACCAGCGGTACCGTGTTCGATACCCGTGCGGACGCACA CCTCGGTGGGGAGGCTTCGA
Downstream 100 bases:
>100_bases CTTGCTACGAGTGCACGCATGCCGCACGTAATTACTCAGTCGTGCTGCAACGACGCGTCCTGCGTCTTCGCATGTCCGGT GAACTGCATCCACCCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPWYQAQSRE RQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWV SPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLIRMQRFW ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKIDG KPSRYRSEPQRQHLAAAPAA
Sequences:
>Translated_340_residues MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPWYQAQSRE RQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWV SPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLIRMQRFW ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKIDG KPSRYRSEPQRQHLAAAPAA >Mature_340_residues MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPWYQAQSRE RQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWV SPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLIRMQRFW ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKIDG KPSRYRSEPQRQHLAAAPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39811; Mature: 39811
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEECCCCCE ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP EEECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCC EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLIRMQRFW CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH HHHHHHHHHHHHHHEEECCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA HHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHCCCCC >Mature Secondary Structure MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEECCCCCE ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP EEECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCC EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLIRMQRFW CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH HHHHHHHHHHHHHHEEECCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA HHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]