Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is fprB
Identifier: 121636809
GI number: 121636809
Start: 1014260
End: 1015987
Strand: Direct
Name: fprB
Synonym: BCG_0938
Alternate gene names: 121636809
Gene position: 1014260-1015987 (Clockwise)
Preceding gene: 121636808
Following gene: 121636811
Centisome position: 23.19
GC content: 67.77
Gene sequence:
>1728_bases ATGCCGCACGTAATTACTCAGTCGTGCTGCAACGACGCGTCCTGCGTCTTCGCATGTCCGGTGAACTGCATCCACCCGAC GCCGGACGAGCCGGGCTTCGCGACCTCGGAAATGCTCTATATCGATCCGGTGGCCTGCGTGGACTGTGGTGCCTGCGTAA CCGCCTGCCCGGTCAGCGCGATCGCGCCGAACACCCGGTTGGACTTCGAGCAGCTGCCGTTCGTCGAAATCAATGCGTCG TATTACCCGAAGCGGCCCGCCGGCGTGAAGCTAGCGCCGACGTCGAAGCTGGCTCCGGTGACTCCGGCCGCCGAGGTGCG TGTGCGCCGGCAGCCGCTGACGGTAGCCGTCGTCGGGTCCGGGCCCGCGGCGATGTATGCCGCCGATGAGCTGCTGGTCC AGCAGGGAGTGCAGGTCAACGTCTTTGAGAAGCTGCCGACACCCTACGGGCTGGTGCGCTCCGGGGTGGCGCCGGATCAC CAGAACACCAAGCGGGTCACGCGACTATTTGACCGGATCGCCGGTCATCGCCGCTTCCGGTTCTATCTCAACGTCGAGAT CGGCAAGCATCTAGGCCATGCCGAGCTATTGGCCCACCATCACGCCGTGCTGTACGCGGTCGGAGCGCCCGACGACCGCC GGCTGACGATTGACGGGATGGGACTGCCGGGCACCGGTACCGCCACGGAGCTGGTCGCGTGGCTCAACGGACATCCCGAC TTCAACGATCTGCCAGTCGATCTCAGTCACGAACGCGTGGTGATCATCGGCAACGGGAATGTCGCGCTCGACGTGGCGCG CGTGCTTGCGGCCGATCCGCACGAGCTGGCCGCCACCGACATCGCCGACCACGCGTTGTCCGCGTTACGCAACTCGGCGG TCCGTGAGGTGGTGGTCGCCGCCCGCCGCGGTCCTGCCCATTCGGCGTTCACCCTGCCCGAGCTGATCGGGCTCACGGCC GGAGCCGACGTCGTGCTTGACCCGGGAGATCATCAGCGAGTACTCGATGATCTGGCAATCGTTGCCGATCCGTTGACCAG GAACAAGCTGGAGATCTTGAGCACGCTGGGGGACGGGTCGGCGCCTGCGCGACGAGTCGGGCGCCCGCGGATCCGGCTGG CCTATCGGCTCACGCCGCGGCGCGTCCTCGGCCAGCGGCGGGCCGGCGGAGTTCAGTTCTCGGTCACCGGAACCGACGAG CTGCGCCAACTGGATGCTGGCCTGGTGCTGACGTCGATTGGCTACCGCGGCAAGCCGATTCCCGACCTGCCGTTCGACGA GCAGGCCGCGCTCGTGCCCAACGATGGTGGACGGGTCATCGACCCGGGCACCGGCGAGCCGGTGCCCGGCGCATACGTCG CGGGTTGGATCAAGCGCGGGCCCACCGGGTTCATCGGCACGAACAAGTCCTGCTCTATGCAGACCGTTCAGGCGTTGGTG GCCGACTTCAACGACGGCCGGCTGACCGATCCGGTGGCTACACCGACGGCGCTGGATCAGCTGGTGCAGGCCCGCCAGCC CCAAGCCATCGGCTGTGCGGGATGGCGGGCCATCGACGCGGCCGAGATTGCGCGCGGCAGCGCCGACGGCCGGGTCCGCA ACAAGTTCACCGACGTCGCCGAGATGCTCGCGGCAGCAACCAGCGCGCCTAAGGAACCGCTTCGGCGGCGCGTGCTGGCC CGGCTGCGTGACCTGGGGCAGCCGATCGTGCTAACCGTCCCCTTGTGA
Upstream 100 bases:
>100_bases ACTCTGCAAGATCGACGGCAAGCCGTCGCGCTACCGCAGCGAGCCGCAGCGTCAGCACTTGGCTGCCGCGCCGGCCGCAT AGCTTGCTACGAGTGCACGC
Downstream 100 bases:
>100_bases TGACATGGCGGCTTGGATCTCATCCATGTTGACCTCGCGCACCGGCTGGCCCAGCGACCAGTGGTGGCCGAACGGGTCGG CGACCACCCCGTAGCGGTCT
Product: putative NADPH:adrenodoxin oxidoreductase fprB
Products: NA
Alternate protein names: FNR
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MPHVITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINAS YYPKRPAGVKLAPTSKLAPVTPAAEVRVRRQPLTVAVVGSGPAAMYAADELLVQQGVQVNVFEKLPTPYGLVRSGVAPDH QNTKRVTRLFDRIAGHRRFRFYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELVAWLNGHPD FNDLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNSAVREVVVAARRGPAHSAFTLPELIGLTA GADVVLDPGDHQRVLDDLAIVADPLTRNKLEILSTLGDGSAPARRVGRPRIRLAYRLTPRRVLGQRRAGGVQFSVTGTDE LRQLDAGLVLTSIGYRGKPIPDLPFDEQAALVPNDGGRVIDPGTGEPVPGAYVAGWIKRGPTGFIGTNKSCSMQTVQALV ADFNDGRLTDPVATPTALDQLVQARQPQAIGCAGWRAIDAAEIARGSADGRVRNKFTDVAEMLAAATSAPKEPLRRRVLA RLRDLGQPIVLTVPL
Sequences:
>Translated_575_residues MPHVITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINAS YYPKRPAGVKLAPTSKLAPVTPAAEVRVRRQPLTVAVVGSGPAAMYAADELLVQQGVQVNVFEKLPTPYGLVRSGVAPDH QNTKRVTRLFDRIAGHRRFRFYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELVAWLNGHPD FNDLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNSAVREVVVAARRGPAHSAFTLPELIGLTA GADVVLDPGDHQRVLDDLAIVADPLTRNKLEILSTLGDGSAPARRVGRPRIRLAYRLTPRRVLGQRRAGGVQFSVTGTDE LRQLDAGLVLTSIGYRGKPIPDLPFDEQAALVPNDGGRVIDPGTGEPVPGAYVAGWIKRGPTGFIGTNKSCSMQTVQALV ADFNDGRLTDPVATPTALDQLVQARQPQAIGCAGWRAIDAAEIARGSADGRVRNKFTDVAEMLAAATSAPKEPLRRRVLA RLRDLGQPIVLTVPL >Mature_574_residues PHVITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINASY YPKRPAGVKLAPTSKLAPVTPAAEVRVRRQPLTVAVVGSGPAAMYAADELLVQQGVQVNVFEKLPTPYGLVRSGVAPDHQ NTKRVTRLFDRIAGHRRFRFYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELVAWLNGHPDF NDLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNSAVREVVVAARRGPAHSAFTLPELIGLTAG ADVVLDPGDHQRVLDDLAIVADPLTRNKLEILSTLGDGSAPARRVGRPRIRLAYRLTPRRVLGQRRAGGVQFSVTGTDEL RQLDAGLVLTSIGYRGKPIPDLPFDEQAALVPNDGGRVIDPGTGEPVPGAYVAGWIKRGPTGFIGTNKSCSMQTVQALVA DFNDGRLTDPVATPTALDQLVQARQPQAIGCAGWRAIDAAEIARGSADGRVRNKFTDVAEMLAAATSAPKEPLRRRVLAR LRDLGQPIVLTVPL
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI111118981, Length=486, Percent_Identity=39.5061728395062, Blast_Score=289, Evalue=4e-78, Organism=Homo sapiens, GI111118983, Length=492, Percent_Identity=39.2276422764228, Blast_Score=284, Evalue=1e-76, Organism=Escherichia coli, GI87082180, Length=159, Percent_Identity=32.0754716981132, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1789606, Length=165, Percent_Identity=29.6969696969697, Blast_Score=63, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17543860, Length=440, Percent_Identity=31.8181818181818, Blast_Score=196, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320584, Length=484, Percent_Identity=30.1652892561983, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320030, Length=262, Percent_Identity=27.4809160305344, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI17137178, Length=445, Percent_Identity=34.8314606741573, Blast_Score=222, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FPRB_MYCBO (P65529)
Other databases:
- EMBL: BX248336 - RefSeq: NP_854567.1 - ProteinModelPortal: P65529 - EnsemblBacteria: EBMYCT00000016684 - GeneID: 1092796 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb0910 - GeneTree: EBGT00050000014581 - HOGENOM: HBG522200 - OMA: DRIKEVP - ProtClustDB: CLSK790809 - BioCyc: MBOV233413:MB0910-MONOMER - BRENDA: 1.18.1.2 - GO: GO:0006810 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR021163 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000362
Pfam domain/function: PF07992 Pyr_redox_2
EC number: =1.18.1.2
Molecular weight: Translated: 61338; Mature: 61207
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: BINDING 123-123 BINDING 143-143 BINDING 151-151 BINDING 187-187 BINDING 213-213 BINDING 314-314 BINDING 456-456 BINDING 463-463
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSA CCCCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCHHHHHCCHHH IAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAEVRVRRQPLTVAVVGS CCCCCCCCHHHCCEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHEEECCCEEEEEECC GPAAMYAADELLVQQGVQVNVFEKLPTPYGLVRSGVAPDHQNTKRVTRLFDRIAGHRRFR CCHHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEE FYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELVAWLNGHPD EEEEEECCCCCCHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC FNDLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNSAVREVVVA CCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRGPAHSAFTLPELIGLTAGADVVLDPGDHQRVLDDLAIVADPLTRNKLEILSTLGDGS HCCCCCCCCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC APARRVGRPRIRLAYRLTPRRVLGQRRAGGVQFSVTGTDELRQLDAGLVLTSIGYRGKPI CCHHHCCCCCEEEEEEECHHHHHCCCCCCCEEEEEECHHHHHHHHCCEEEEECCCCCCCC PDLPFDEQAALVPNDGGRVIDPGTGEPVPGAYVAGWIKRGPTGFIGTNKSCSMQTVQALV CCCCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH ADFNDGRLTDPVATPTALDQLVQARQPQAIGCAGWRAIDAAEIARGSADGRVRNKFTDVA HCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHH EMLAAATSAPKEPLRRRVLARLRDLGQPIVLTVPL HHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure PHVITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSA CCCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCHHHHHCCHHH IAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAEVRVRRQPLTVAVVGS CCCCCCCCHHHCCEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHEEECCCEEEEEECC GPAAMYAADELLVQQGVQVNVFEKLPTPYGLVRSGVAPDHQNTKRVTRLFDRIAGHRRFR CCHHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEE FYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELVAWLNGHPD EEEEEECCCCCCHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC FNDLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNSAVREVVVA CCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRGPAHSAFTLPELIGLTAGADVVLDPGDHQRVLDDLAIVADPLTRNKLEILSTLGDGS HCCCCCCCCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC APARRVGRPRIRLAYRLTPRRVLGQRRAGGVQFSVTGTDELRQLDAGLVLTSIGYRGKPI CCHHHCCCCCEEEEEEECHHHHHCCCCCCCEEEEEECHHHHHHHHCCEEEEECCCCCCCC PDLPFDEQAALVPNDGGRVIDPGTGEPVPGAYVAGWIKRGPTGFIGTNKSCSMQTVQALV CCCCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH ADFNDGRLTDPVATPTALDQLVQARQPQAIGCAGWRAIDAAEIARGSADGRVRNKFTDVA HCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHH EMLAAATSAPKEPLRRRVLARLRDLGQPIVLTVPL HHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972