Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is PE_PGRS13 [H]
Identifier: 121636756
GI number: 121636756
Start: 955372
End: 958104
Strand: Direct
Name: PE_PGRS13 [H]
Synonym: BCG_0885
Alternate gene names: 121636756
Gene position: 955372-958104 (Clockwise)
Preceding gene: 121636754
Following gene: 121636758
Centisome position: 21.84
GC content: 80.17
Gene sequence:
>2733_bases GTGTCTTATGTGAGCGTGTTGCCCGCTACGCTGGCCACAGCGGCAACAGAGGTGGCCCGCATCGGCTCGGCGCTCAGTTT GGCTAGCGCGGTCGCGGCGGCCCAGACCAGCGCGGTGCAGGCCGCGGCCGCGGATGAGGTGTCGGCGGCGATCGCTGCGC TGTTTTCCGCCCACGGGCGGGATTTTCAGGCGCTCAGCGCGCGGGCGGCAGCGTTTCATCACGAGTTTGTGCAGGCCCTG GCCGCGGGTGCGGGGTCCTATGCGGTCGCCGAGATTGCCGCCGCATCGCCGTTGCAGAGCCTGATCGACGTGTTCAACGC GCCCATCCAGGCCGCCACCGGGCGCCCGCTGATCGGCAACGGCGCCAACGGCCAGCCGGGCACCGGGGCCCCGGGGGGGC CCGGCGGGTGGTTGATCGGCAACGGCGGGGCCGGCGGGTCCGGGGCGCCCGGCGCCATCGGTGGGGCCGGCGGGCCCGCG GGGTTGATCGGTGTCGGAGGTGCCGGCGGGGCCGGTGGAGACTCCGCGGTCGCGGGTGTCATCGGAGGGGCCGGTGGGGC AGGCGGGGCTGCCCTGCTGTTCGGTGCCGGTGGGGCCGGCGGGGCCGGGGGTTCCGGCGGTTCCGGCGCAGCTGGTGGGG CCGGTGGCGCCGGTGGGGCCGGCGGGCTGTTCGCCAGCGGCGGCAGCGGCGGGTTCGGCGGGTTCGCATCGACGGGCACC GGTGGGGCCGGCGGCACCGGTGGGGCTGGTGGGTTGTTCGCCAGCGGCGGGGTCGGCGGTACTGGCGGGGGAGCCGGGTC CGGCGGTACCGGTGGGGTTGGTGGGACGGGTGGGGCCGGAGGGCTGTTCGCTAGCGGCGGCGCTGGCGGGGCCGGCGGGT CCGGCGGTACCGGTGGGGCTGGTGGGACGGGTGGGGCCGGCGGGCTGTTCGGAGCCGGTGGCGCTGGCGGGCTCGGCGGG CAAGGCAACCACACCGGCGGGCACGGTGGGGCCGGTGGCAGCGCCGGCCTGCTCGCCCTTGGCGACGGCGGCGCTGGCGG GGCCGGCGGGGCCGCTACCACCGGAACCGGCGGGGCCGGCGGGGCGGGTGGCAAGGCCGGCCTGCTGTTCGGCTCCGGTG GGGCCGGTGGGTCCGGTGGGGCTGCCGGCACCTTCGGTGACACCGGTAACTCCGGCGGGGCCGGTGGGGCGGGTGGCAAG GCCGGCCTGCTGTTCGGCTCCGGTGGGGCCGGTGGGTCCGGCGGCGCTGGGGGCTTCGCCAACGGCTCTACCGGCGGTGC CGGCGGGGCCGGCGGCGGGGCCGGGCTGATCGGCAACGGCGGCAACGGTGGCAGCGGCGGCACGTCGGTTGCCACCGGGG GGGCCGGGAACGGCGGTGCCGGCGGCGCCGGCGGCGGGGCCGGGCTGATCGGCAACGGCGGCAACGGCGGCAGTGGCGGA ATGGGCGATGCCCCGGGCGGCACCGGCGTCGGCGGCATCGGTGGGCTGTTGTTGGGTTTGGACGGCGCCAACGCCCCGGC CAGCACCAACCCGCTGCACACCGCGCAGCAGCAGGCGTTGGCCGCAGTCAACGCGCCCATCCAGGCCGTGACCGGGCGCC CGCTGATCGGCAACGGCGCCAACGGCGCCCCGGGCAGCGGGGCCCCCGGCGGGCACGGCGGGTGGTTGTTCGGCGGCGGA GGGACCGGCGGGTCCGGCGTCAGCGGCGGGGCGGGCGGAGATGGCGGGGCCGGCGGGATCTTGTTCGGCGCCGGCGGGGC CGGCGGCGCGGGCGGGGCCGTCACGGGAACCGGCGCCACCGGCGGGTCCGGTGGGGCCGGCGGTGGAGCCTTGCTGTTTG GGGCCGGTGGGGCCGGTGGAGCCGGCGGGTCCAGCGGGATTGGCGGGTTCGCCGCGGGCGGGGCCGGTGGGCCCGGAGGG GCCGGTGGGCTGTTCAACGGCGGCGGGGCCGGCGGGGCCGGCGGGTCCGGCGTCAGCGGCGGGGCTGGCGGGGAGGGCGG GGCCGGCGGGGCCGGTGGCCTGTTCGCCGGTGGCGGGATCGGCGGGGCCGGCGGATTCGGCGGATTCCGCGGCGGGGAGG GCGGGGCCGGCGGGGCCGGTGGCCTGTTCGCCGGTGGCGGGGCCGGCGGGGCCGGCGGATCGGGCAACAACGTCGGGGGG GCCGGCGGGGCCGGTGGGGTCGGTGGGCTGTTCGGGGCCGGCGGGGCCGGCGGATCCGGCGGCGGCGGTAGCGTTGCTGG CGACGGTGGGGCCGGCGGCAACGCGGGCTTGCTCGCCCCCGGTCTCGCCGGCGGTGCCGGCGGTGGCGGCGGGCAGGGTT TTGACACCGGCGGGGCCGGCGGGCCCGGCGGCGACGCCGGCCTGCTGGTCGGCTCCGGCGGGGTCGGAGGTGCCGGCGGA TTCGGCCTCACTACGGGTGGGCCTGGGGCGGCCGGCGGCGACGCCGGCCTGCTGTTCGGCTCCGGCGGCGCTGGCGGGGC CGGCGGCTCCGGCCGAACCGACCTCGGCGGCGCTGGCGGGGCCGGCGGCAAGGCCGGGCTGATCGGCAACGGCGGTAACG GCGGGGCCGGCGGGGCCGGCGGGGCCGGCGGGCCCGGTGGAGCCGCCTTCGGGCTCGGTAACGGCGGCAACGGCGGCAAC GGGGGGACCGGCACGTCCGCGGGCAGCCCCGGTGCCGGCGGCGCCGGTGGTTCGCTGATCGGCGCGGAGGGGCTGCCCGG GCTGCTGCCCTAG
Upstream 100 bases:
>100_bases CCGACGGGATTACACTGCTTCCTGCTGATTCCTCCCTGCGATCGGTCGATCGCAGGATCGGTTGGCATCGAGGTCATGTC GCTGTGGGAGGAGATGTCGC
Downstream 100 bases:
>100_bases CCGGCCCGGTTGGACCACGTGATCGACGACCGTCACAAGTCGACACGCCGAACGTGCAACCACGGCGGCATCACCTGGCG TGTCGCCGCCACCAGCGCAC
Product: PE-PGRS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 910; Mature: 909
Protein sequence:
>910_residues MSYVSVLPATLATAATEVARIGSALSLASAVAAAQTSAVQAAAADEVSAAIAALFSAHGRDFQALSARAAAFHHEFVQAL AAGAGSYAVAEIAAASPLQSLIDVFNAPIQAATGRPLIGNGANGQPGTGAPGGPGGWLIGNGGAGGSGAPGAIGGAGGPA GLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAGGAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGT GGAGGTGGAGGLFASGGVGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGGLGG QGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGGSGGAAGTFGDTGNSGGAGGAGGK AGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLIGNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGG MGDAPGGTGVGGIGGLLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLFGGG GTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGGAGGAGGSSGIGGFAAGGAGGPGG AGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAGGGIGGAGGFGGFRGGEGGAGGAGGLFAGGGAGGAGGSGNNVGG AGGAGGVGGLFGAGGAGGSGGGGSVAGDGGAGGNAGLLAPGLAGGAGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGG FGLTTGGPGAAGGDAGLLFGSGGAGGAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGAGGPGGAAFGLGNGGNGGN GGTGTSAGSPGAGGAGGSLIGAEGLPGLLP
Sequences:
>Translated_910_residues MSYVSVLPATLATAATEVARIGSALSLASAVAAAQTSAVQAAAADEVSAAIAALFSAHGRDFQALSARAAAFHHEFVQAL AAGAGSYAVAEIAAASPLQSLIDVFNAPIQAATGRPLIGNGANGQPGTGAPGGPGGWLIGNGGAGGSGAPGAIGGAGGPA GLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAGGAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGT GGAGGTGGAGGLFASGGVGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGGLGG QGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGGSGGAAGTFGDTGNSGGAGGAGGK AGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLIGNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGG MGDAPGGTGVGGIGGLLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLFGGG GTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGGAGGAGGSSGIGGFAAGGAGGPGG AGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAGGGIGGAGGFGGFRGGEGGAGGAGGLFAGGGAGGAGGSGNNVGG AGGAGGVGGLFGAGGAGGSGGGGSVAGDGGAGGNAGLLAPGLAGGAGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGG FGLTTGGPGAAGGDAGLLFGSGGAGGAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGAGGPGGAAFGLGNGGNGGN GGTGTSAGSPGAGGAGGSLIGAEGLPGLLP >Mature_909_residues SYVSVLPATLATAATEVARIGSALSLASAVAAAQTSAVQAAAADEVSAAIAALFSAHGRDFQALSARAAAFHHEFVQALA AGAGSYAVAEIAAASPLQSLIDVFNAPIQAATGRPLIGNGANGQPGTGAPGGPGGWLIGNGGAGGSGAPGAIGGAGGPAG LIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAGGAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTG GAGGTGGAGGLFASGGVGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGGLGGQ GNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGGSGGAAGTFGDTGNSGGAGGAGGKA GLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLIGNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGM GDAPGGTGVGGIGGLLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLFGGGG TGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGGAGGAGGSSGIGGFAAGGAGGPGGA GGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAGGGIGGAGGFGGFRGGEGGAGGAGGLFAGGGAGGAGGSGNNVGGA GGAGGVGGLFGAGGAGGSGGGGSVAGDGGAGGNAGLLAPGLAGGAGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGF GLTTGGPGAAGGDAGLLFGSGGAGGAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGAGGPGGAAFGLGNGGNGGNG GTGTSAGSPGAGGAGGSLIGAEGLPGLLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000084 [H]
Pfam domain/function: PF00934 PE [H]
EC number: NA
Molecular weight: Translated: 72471; Mature: 72340
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVSVLPATLATAATEVARIGSALSLASAVAAAQTSAVQAAAADEVSAAIAALFSAHGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DFQALSARAAAFHHEFVQALAAGAGSYAVAEIAAASPLQSLIDVFNAPIQAATGRPLIGN CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEECC GANGQPGTGAPGGPGGWLIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGV CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHH IGGAGGAGGAALLFGAGGAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGT HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC GGAGGTGGAGGLFASGGVGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGA CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC GGTGGAGGLFGAGGAGGLGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC GAGGKAGLLFGSGGAGGSGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC NGSTGGAGGAGGGAGLIGNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGG CCCCCCCCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCC MGDAPGGTGVGGIGGLLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGA CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCEECCCC NGAPGSGAPGGHGGWLFGGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGAT CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCC GGSGGAGGGALLFGAGGAGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSG CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGGEGGAGGAGGLFAGGGIGGAGGFGGFRGGEGGAGGAGGLFAGGGAGGAGGSGNNVGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGGAGGVGGLFGAGGAGGSGGGGSVAGDGGAGGNAGLLAPGLAGGAGGGGGQGFDTGGAG CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC GPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAGGAGGSGRTDLGGAGG CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC AGGKAGLIGNGGNGGAGGAGGAGGPGGAAFGLGNGGNGGNGGTGTSAGSPGAGGAGGSLI CCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE GAEGLPGLLP CCCCCCCCCC >Mature Secondary Structure SYVSVLPATLATAATEVARIGSALSLASAVAAAQTSAVQAAAADEVSAAIAALFSAHGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DFQALSARAAAFHHEFVQALAAGAGSYAVAEIAAASPLQSLIDVFNAPIQAATGRPLIGN CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEECC GANGQPGTGAPGGPGGWLIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGV CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHH IGGAGGAGGAALLFGAGGAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGT HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC GGAGGTGGAGGLFASGGVGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGA CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC GGTGGAGGLFGAGGAGGLGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC GAGGKAGLLFGSGGAGGSGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC NGSTGGAGGAGGGAGLIGNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGG CCCCCCCCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCC MGDAPGGTGVGGIGGLLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGA CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCEECCCC NGAPGSGAPGGHGGWLFGGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGAT CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCC GGSGGAGGGALLFGAGGAGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSG CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGGEGGAGGAGGLFAGGGIGGAGGFGGFRGGEGGAGGAGGLFAGGGAGGAGGSGNNVGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGGAGGVGGLFGAGGAGGSGGGGSVAGDGGAGGNAGLLAPGLAGGAGGGGGQGFDTGGAG CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC GPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAGGAGGSGRTDLGGAGG CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC AGGKAGLIGNGGNGGAGGAGGAGGPGGAAFGLGNGGNGGNGGTGTSAGSPGAGGAGGSLI CCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE GAEGLPGLLP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]