Definition Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
Accession NC_008769
Length 4,374,522

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The map label for this gene is lpqQ

Identifier: 121636758

GI number: 121636758

Start: 961447

End: 962091

Strand: Direct

Name: lpqQ

Synonym: BCG_0887

Alternate gene names: NA

Gene position: 961447-962091 (Clockwise)

Preceding gene: 121636756

Following gene: 121636761

Centisome position: 21.98

GC content: 62.17

Gene sequence:

>645_bases
GTGTGTTGCTCCACTGCTGCCAAGTCGGCCGTCATCGTCTGCTGTGCGGCCATCGCGACCACGGCATGCTCGTTTCAAGC
CACATCGACCCAGCCGAGCACCGCACCCCCGACATCGCGGGTCGATTCGTTGATCGTCAGCATCGAAGACGTACGGCGCA
TCGCCAACTACGAGGAGCTCGCCGCACATTTTCAGACCGACTTGCGTGAACCGCCGGAGGCGGACACGAACGTTCCGGGC
CCCTGTCGTGTGGTGGGCAGCAGTGATCGCACCTTCGGAACCGACTGGTCAGAGTTCCGTAGCGCGGGTTACCACGGCGT
TACCGACGACCTCAGACCGGGCGGGCCGGTCATGGTCGAGACGGTTAGCCAGGCGATAGCGCTGTACCCGGACCCGAGTA
CGGCGCGCGGTGTGTTCCATCGGCTCGAGTCGTCGCTGGCAGAATGTGCTGGCTTGCATGACCCCTACTTCGATTTCATC
CTCGGCAGGCCGGACGCCTCCACCGTGAGGATCGGCGCTGCGGGTTGGAGTCATGTGTATCGCCTGAAATCGTCGGTATT
CATATCCGTTGGCGTGTTGGGTATTGAACCGGCAGAGCCGATCGCCAACGTCATCTTGCAGACGATCAGCGATCGCATCC
AGTAG

Upstream 100 bases:

>100_bases
CGGACGCCAGTCCGCAGAAGCCGGCTTATCGACAATGAGGCCAAAGAGCTCAACCCGTCAGCGGACATGTGGCGCGCGCT
GGCCAGTGTGGCGATCAGTC

Downstream 100 bases:

>100_bases
TTAGCCGAGGACTGGAAAGCAGCAGCGGCGGCGACGAGCGCAGCGTGTTGAGGGCTGTTGACGCCACGACGCCCACCGTT
GCGAAGAAGAAGGCGAGAAG

Product: putative lipoprotein lpqQ

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG
PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI
LGRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ

Sequences:

>Translated_214_residues
MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG
PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI
LGRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ
>Mature_214_residues
MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG
PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI
LGRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22845; Mature: 22845

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEEL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH
AAHFQTDLREPPEADTNVPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVE
HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHH
TVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFILGRPDASTVRIGAAGWSHVY
HHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCEEEEECCCHHHHH
RLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ
HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEEL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH
AAHFQTDLREPPEADTNVPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVE
HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHH
TVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFILGRPDASTVRIGAAGWSHVY
HHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCEEEEECCCHHHHH
RLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ
HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA