Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is lpqQ
Identifier: 121636758
GI number: 121636758
Start: 961447
End: 962091
Strand: Direct
Name: lpqQ
Synonym: BCG_0887
Alternate gene names: NA
Gene position: 961447-962091 (Clockwise)
Preceding gene: 121636756
Following gene: 121636761
Centisome position: 21.98
GC content: 62.17
Gene sequence:
>645_bases GTGTGTTGCTCCACTGCTGCCAAGTCGGCCGTCATCGTCTGCTGTGCGGCCATCGCGACCACGGCATGCTCGTTTCAAGC CACATCGACCCAGCCGAGCACCGCACCCCCGACATCGCGGGTCGATTCGTTGATCGTCAGCATCGAAGACGTACGGCGCA TCGCCAACTACGAGGAGCTCGCCGCACATTTTCAGACCGACTTGCGTGAACCGCCGGAGGCGGACACGAACGTTCCGGGC CCCTGTCGTGTGGTGGGCAGCAGTGATCGCACCTTCGGAACCGACTGGTCAGAGTTCCGTAGCGCGGGTTACCACGGCGT TACCGACGACCTCAGACCGGGCGGGCCGGTCATGGTCGAGACGGTTAGCCAGGCGATAGCGCTGTACCCGGACCCGAGTA CGGCGCGCGGTGTGTTCCATCGGCTCGAGTCGTCGCTGGCAGAATGTGCTGGCTTGCATGACCCCTACTTCGATTTCATC CTCGGCAGGCCGGACGCCTCCACCGTGAGGATCGGCGCTGCGGGTTGGAGTCATGTGTATCGCCTGAAATCGTCGGTATT CATATCCGTTGGCGTGTTGGGTATTGAACCGGCAGAGCCGATCGCCAACGTCATCTTGCAGACGATCAGCGATCGCATCC AGTAG
Upstream 100 bases:
>100_bases CGGACGCCAGTCCGCAGAAGCCGGCTTATCGACAATGAGGCCAAAGAGCTCAACCCGTCAGCGGACATGTGGCGCGCGCT GGCCAGTGTGGCGATCAGTC
Downstream 100 bases:
>100_bases TTAGCCGAGGACTGGAAAGCAGCAGCGGCGGCGACGAGCGCAGCGTGTTGAGGGCTGTTGACGCCACGACGCCCACCGTT GCGAAGAAGAAGGCGAGAAG
Product: putative lipoprotein lpqQ
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI LGRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ
Sequences:
>Translated_214_residues MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI LGRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ >Mature_214_residues MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI LGRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22845; Mature: 22845
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEEL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH AAHFQTDLREPPEADTNVPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVE HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHH TVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFILGRPDASTVRIGAAGWSHVY HHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCEEEEECCCHHHHH RLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEEL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH AAHFQTDLREPPEADTNVPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVE HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHH TVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFILGRPDASTVRIGAAGWSHVY HHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCEEEEECCCHHHHH RLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA