Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636714
Identifier: 121636714
GI number: 121636714
Start: 915233
End: 915832
Strand: Reverse
Name: 121636714
Synonym: BCG_0842c
Alternate gene names: NA
Gene position: 915832-915233 (Counterclockwise)
Preceding gene: 121636715
Following gene: 121636710
Centisome position: 20.94
GC content: 64.67
Gene sequence:
>600_bases GTGTCGCGTCGTGCCATTCACAGTGGCCGGGCTGCCCCGCGTCGCTCAGGGAATTCTCATCTTGTTCTTCGCAACCGGGT TCCCAGCTCAAAGGATTCACCAAGGCGCCGGCCGCATCATGAGTTCATGACTGAGTCGATAGGCGAGCCGCTGAGCACCA ACCTGATCGAGCGCTACCTGCGCGCCCGCGGCCGGCGATACTTCCGTGGCCACCACGACGCCGAGTTCTTCTTCGTCGCC AACGCCCACCTGCGGCTGCACGTCCACCTAGAAATCTCTCCCGCCTACCGCGACGTGTTCACGATCAGGGTCAGTCCCGC ATACTTCTTCCCCGCCACCGACCACACCCGGTTGGCGGAGATCGTCAACGCGTGGAACCTGCAGAACCACGAGGTCACCG CGATCGTGCACGGGTCCTCTGATCCGCACCGCATCGGCGTGGCCGCAGAGCGGTCCTTGATCAGGGACCGCATCCGGTTC GACGATTTCGCCACCTTCGTCGACAACGCCGTCTCGGCCGCGACGGAGCTCTTCGGTCAGCTGACGGCAGCCGGATTACC TCCAACCGCGACGCCGCCGTTGCTGCGAGACGCCGGGTGA
Upstream 100 bases:
>100_bases ACACGCCTTGGTAGCCGCTGACGAGGAACTGTGGACCGGCCCCCCGGTTGAATTGGCCGACGCAACCCACCGACTGTGAA TCTCACGACGCCTCCGCCGC
Downstream 100 bases:
>100_bases GCGTGAGCGGGTGACCTCAGCCCGTCAGAACGGCATCCAGCGCTGAATAGAACAGACCCAGTCCGTCGTCGGACGGCCCG GTCAACGCTTCAATCGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSRRAIHSGRAAPRRSGNSHLVLRNRVPSSKDSPRRRPHHEFMTESIGEPLSTNLIERYLRARGRRYFRGHHDAEFFFVA NAHLRLHVHLEISPAYRDVFTIRVSPAYFFPATDHTRLAEIVNAWNLQNHEVTAIVHGSSDPHRIGVAAERSLIRDRIRF DDFATFVDNAVSAATELFGQLTAAGLPPTATPPLLRDAG
Sequences:
>Translated_199_residues MSRRAIHSGRAAPRRSGNSHLVLRNRVPSSKDSPRRRPHHEFMTESIGEPLSTNLIERYLRARGRRYFRGHHDAEFFFVA NAHLRLHVHLEISPAYRDVFTIRVSPAYFFPATDHTRLAEIVNAWNLQNHEVTAIVHGSSDPHRIGVAAERSLIRDRIRF DDFATFVDNAVSAATELFGQLTAAGLPPTATPPLLRDAG >Mature_198_residues SRRAIHSGRAAPRRSGNSHLVLRNRVPSSKDSPRRRPHHEFMTESIGEPLSTNLIERYLRARGRRYFRGHHDAEFFFVAN AHLRLHVHLEISPAYRDVFTIRVSPAYFFPATDHTRLAEIVNAWNLQNHEVTAIVHGSSDPHRIGVAAERSLIRDRIRFD DFATFVDNAVSAATELFGQLTAAGLPPTATPPLLRDAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22487; Mature: 22355
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRAIHSGRAAPRRSGNSHLVLRNRVPSSKDSPRRRPHHEFMTESIGEPLSTNLIERYL CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH RARGRRYFRGHHDAEFFFVANAHLRLHVHLEISPAYRDVFTIRVSPAYFFPATDHTRLAE HHCCCHHHCCCCCCEEEEEEECEEEEEEEEEECCCCCEEEEEEECCEEEECCCCHHHHHH IVNAWNLQNHEVTAIVHGSSDPHRIGVAAERSLIRDRIRFDDFATFVDNAVSAATELFGQ HHHHHCCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAAGLPPTATPPLLRDAG HHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SRRAIHSGRAAPRRSGNSHLVLRNRVPSSKDSPRRRPHHEFMTESIGEPLSTNLIERYL CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH RARGRRYFRGHHDAEFFFVANAHLRLHVHLEISPAYRDVFTIRVSPAYFFPATDHTRLAE HHCCCHHHCCCCCCEEEEEEECEEEEEEEEEECCCCCEEEEEEECCEEEECCCCHHHHHH IVNAWNLQNHEVTAIVHGSSDPHRIGVAAERSLIRDRIRFDDFATFVDNAVSAATELFGQ HHHHHCCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAAGLPPTATPPLLRDAG HHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA