Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636715
Identifier: 121636715
GI number: 121636715
Start: 915854
End: 916582
Strand: Reverse
Name: 121636715
Synonym: BCG_0843c
Alternate gene names: NA
Gene position: 916582-915854 (Counterclockwise)
Preceding gene: 121636716
Following gene: 121636714
Centisome position: 20.95
GC content: 64.88
Gene sequence:
>729_bases ATGACGCTAGCCAACAATGGAACCGGCATGGACCACTTTCTGACGCCCACGGAGTACCTCGACGCGGGCCATCCGCTCGT TCGTACGACGGCAGCAACCCTCATCCGGGACGCGGTGTCGGATACCGAGCGGGTCAGGCGGATCTACTACTACGTGCGCG ACGTGCCATACGACGTCCTCGCGTCCTTTCGCTACCTCGCGCAGGGACATCACCGCGCCAGCGACGTGATCGGCCACGGG GTCGCCTTCTGCATGGGCAAGGCAAGTTCCTTCGTCGCCCTGTGCCGAGCCGCCGGTGTCCCGGCCCGTATCGCGTTCCA GACGATCGACGCCCCCGATAAGGAGTTTCTGTCCCCGCAGGTACGTGCCCTATGGGGAGGCCGAACTGGCCGGCCCTTCC CGTGGCACTCGCTGGGTGAGGCATATCTTGGTCGGCGATGGGTCAAGCTGGACGCCACCATCGACGCACCCACCGCCGCC CGCCTCGGCAAGCCCTACCGGCAAGAATTCGACGGAGCTACCCCGATCCCGACGGTGGAAGGAACCATCCTGCGGGAAAA CGGCAGCTACGCCGACTATCCCAGCGCGGTCGCGCAATGGTACGAACGAATCGCTCAGTCGGTCCTGAAGGCGTTGCAGT CCACCGAAGTACACGCCTTGGTAGCCGCTGACGAGGAACTGTGGACCGGCCCCCCGGTTGAATTGGCCGACGCAACCCAC CGACTGTGA
Upstream 100 bases:
>100_bases GCCATTTTCTCTTCACGATTCCACACGTCGTGAAGTCCGATTATCTGCACATCATCGGCAGTGACATCATTCCGCGGGTC AAAACTGAGGTCACGATTCC
Downstream 100 bases:
>100_bases ATCTCACGACGCCTCCGCCGCGTGTCGCGTCGTGCCATTCACAGTGGCCGGGCTGCCCCGCGTCGCTCAGGGAATTCTCA TCTTGTTCTTCGCAACCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTLANNGTGMDHFLTPTEYLDAGHPLVRTTAATLIRDAVSDTERVRRIYYYVRDVPYDVLASFRYLAQGHHRASDVIGHG VAFCMGKASSFVALCRAAGVPARIAFQTIDAPDKEFLSPQVRALWGGRTGRPFPWHSLGEAYLGRRWVKLDATIDAPTAA RLGKPYRQEFDGATPIPTVEGTILRENGSYADYPSAVAQWYERIAQSVLKALQSTEVHALVAADEELWTGPPVELADATH RL
Sequences:
>Translated_242_residues MTLANNGTGMDHFLTPTEYLDAGHPLVRTTAATLIRDAVSDTERVRRIYYYVRDVPYDVLASFRYLAQGHHRASDVIGHG VAFCMGKASSFVALCRAAGVPARIAFQTIDAPDKEFLSPQVRALWGGRTGRPFPWHSLGEAYLGRRWVKLDATIDAPTAA RLGKPYRQEFDGATPIPTVEGTILRENGSYADYPSAVAQWYERIAQSVLKALQSTEVHALVAADEELWTGPPVELADATH RL >Mature_241_residues TLANNGTGMDHFLTPTEYLDAGHPLVRTTAATLIRDAVSDTERVRRIYYYVRDVPYDVLASFRYLAQGHHRASDVIGHGV AFCMGKASSFVALCRAAGVPARIAFQTIDAPDKEFLSPQVRALWGGRTGRPFPWHSLGEAYLGRRWVKLDATIDAPTAAR LGKPYRQEFDGATPIPTVEGTILRENGSYADYPSAVAQWYERIAQSVLKALQSTEVHALVAADEELWTGPPVELADATHR L
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26684; Mature: 26553
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLANNGTGMDHFLTPTEYLDAGHPLVRTTAATLIRDAVSDTERVRRIYYYVRDVPYDVL CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ASFRYLAQGHHRASDVIGHGVAFCMGKASSFVALCRAAGVPARIAFQTIDAPDKEFLSPQ HHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCHH VRALWGGRTGRPFPWHSLGEAYLGRRWVKLDATIDAPTAARLGKPYRQEFDGATPIPTVE HHHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHCCHHHHHCCCCCCCCCCC GTILRENGSYADYPSAVAQWYERIAQSVLKALQSTEVHALVAADEELWTGPPVELADATH CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCHHHHHCC RL CC >Mature Secondary Structure TLANNGTGMDHFLTPTEYLDAGHPLVRTTAATLIRDAVSDTERVRRIYYYVRDVPYDVL CCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ASFRYLAQGHHRASDVIGHGVAFCMGKASSFVALCRAAGVPARIAFQTIDAPDKEFLSPQ HHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCHH VRALWGGRTGRPFPWHSLGEAYLGRRWVKLDATIDAPTAARLGKPYRQEFDGATPIPTVE HHHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHCCHHHHHCCCCCCCCCCC GTILRENGSYADYPSAVAQWYERIAQSVLKALQSTEVHALVAADEELWTGPPVELADATH CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCHHHHHCC RL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA