Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636590
Identifier: 121636590
GI number: 121636590
Start: 799093
End: 801006
Strand: Reverse
Name: 121636590
Synonym: BCG_0718c
Alternate gene names: NA
Gene position: 801006-799093 (Counterclockwise)
Preceding gene: 121636597
Following gene: 121636583
Centisome position: 18.31
GC content: 65.26
Gene sequence:
>1914_bases ATGCTTAGTGTAGGGCGCGGCATCGCCGACATCACTGGTGAGGCGGCGGACTGCGGCATGCTCGGCTACGGCAAGTCCGA CCAGCGCACCGCCGGCATTCACCAGCGACTTAGGTCACGGGCGTTTGTGTTCCGGGACGATTCCCAGGACGGGGACGCGC GGTTGCTGCTGATTGTCGCCGAACTGCCGCTGCCCATGCAAAACGTGAATGAGGAAGTGCTGCGCCGGTTGGCCGATTTG TATGGCGATACCTACTCGGAGCAGAACACACTGATCACGGCGACCCACACCCACGCCGGGCCTGGCGGGTACTGCGGATA CCTGCTGTACAACCTGACCACGAGCGGCTTTCGGCCGGCAACCTTTGCGGCGATCGTCGACGGAATTGTCGAATCGGTGG AACATGCGCATGCCGATGTGGCGCCCGCCGAGGTTCCGCTCTCGCACGGCGAGCTGTACGGCGCAAGCATCAATCGATCC CCATCAGCGTTCGACCGCAACCCGCCGGCCGACAAGGCGTTCTTCCCGAAACGCGTCGACCCGCATACCACGCTCGTGCG TATCGACCGGGGCGAGGCCACCGTGGGCGTGATCCATTTCTTCGCTACCCACGGTACGAGCATGACGAATCGCAACCACC TCATCTCCGGAGACAACAAGGGTTTCGCGGCCTATCACTGGGAACGCACCGTGGGCGGCGCGGATTATCTCGCCGGCCAG CCCGACTTCATCGCCGCCTTCGCACAGACGAATCCGGGCGACATGAGCCCGAATGTCGACGGGCCCCTTTCTCCCGAGGC CCCACCAGACCGGGAATTCGACAACACCCGTCGTACCGGGTTGTGCCAGTTCGAGGATGCTTTCACGCAGTTGAGCGGAG CGACGCCCATCGGCGCTGGCATTGATGCCCGGTTCACCTATGTCGATCTCGGTTCTGTGCTCGTGCGCGGCGAGTACACA CCAGACGGTGAAGAGCGCCGCACCGGGCGTCCGATGTTTGGCGCCGGGGCCATGGCAGGCACCGACGAGGGCCCGGGCTT CCATGGCTTTCGCCAAGGGCGAAACCCGTTCTGGGACAGACTATCCCGCGCCATGTACCGGCTGGCAAGGCCGACGGCAG CGGCACAGGCCCCCAAAGGCATTGTGATGCCCGCACGCCTGCCGAACCGGATACACCCCTTTGTCCAGGAAATTGTTCCC GTTCAGCTCGTGCGAATCGGTCGCCTCTATCTGATCGGTATTCCGGGCGAACCGACCATCGTCGCGGGGCTTAGGCTGCG CCGCATGGTGGCTTCGATTGTTGGCGCCGACCTGGCCGACGTGCTCTGCGTGGGCTACACCAACGCCTACATCCATTACG TGACAACGCCCGAAGAGTATCTCGAACAGCGCTACGAGGGCGGCAGCACGTTGTTCGGTCGATGGGAACTGTGCGCCCTC ATGCAGACCGTGGCCGAACTCGCCGAGGCCATGCGCGACGGCCGTCCGGTGACGCTCGGTCGCCGGCCGCGGCCCACCCG GGAGCTGAGCTGGGTGCGCGGCGCGCCCGCCGATGCCGGGTCGTTCGGAGCGGTCATCGCCGAGCCCTCGGCGACGTACC GACCGGGTCAGGCGGTGGAAGCCGTTTTCGTCAGCGCGCTGCCCAATAACGATCTGCGCCGCGGCGGCACCTACCTCGAA GTGGTCCGCCGGGAAGGTGCCAGCTGGGTGCGGATTGCTGACGACGGCGACTGGGCCACGAGCTTTCGCTGGCAGCGCCA AGGGCGGGCCGGATCGCATGTCAGCATTCGCTGGGATGTTCCCGGCGATACCACGCCCGGGCAATACCGCATCGTCCACC ACGGCACCGCACGCGATCGCAACGGCATGCTTACAGCGTTCAGCGCGACGACGCGCGAGTTCACGGTTGTTTGA
Upstream 100 bases:
>100_bases GCCCCGGCGCATAAAGTGGTTCTCCTTGTGGGATACGTTTCCCCGGAGCAGCGCGTAGTCAGCGCTCGTGAAATTTGCTG CTGGTGCGGAGGATTAGGCA
Downstream 100 bases:
>100_bases CTCGGCGGCCGCAATCACCAACCCAGGCCATGCCTGGGCGTCGGCGATGGAACGCAGTGGCCTGCTGGAATGCGTGGCCG GCTTGGACGAGCAACCGTTC
Product: putative hydrolase
Products: NA
Alternate protein names: N-CDase; NCDase; Acylsphingosine deacylase; N-acylsphingosine amidohydrolase [H]
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MLSVGRGIADITGEAADCGMLGYGKSDQRTAGIHQRLRSRAFVFRDDSQDGDARLLLIVAELPLPMQNVNEEVLRRLADL YGDTYSEQNTLITATHTHAGPGGYCGYLLYNLTTSGFRPATFAAIVDGIVESVEHAHADVAPAEVPLSHGELYGASINRS PSAFDRNPPADKAFFPKRVDPHTTLVRIDRGEATVGVIHFFATHGTSMTNRNHLISGDNKGFAAYHWERTVGGADYLAGQ PDFIAAFAQTNPGDMSPNVDGPLSPEAPPDREFDNTRRTGLCQFEDAFTQLSGATPIGAGIDARFTYVDLGSVLVRGEYT PDGEERRTGRPMFGAGAMAGTDEGPGFHGFRQGRNPFWDRLSRAMYRLARPTAAAQAPKGIVMPARLPNRIHPFVQEIVP VQLVRIGRLYLIGIPGEPTIVAGLRLRRMVASIVGADLADVLCVGYTNAYIHYVTTPEEYLEQRYEGGSTLFGRWELCAL MQTVAELAEAMRDGRPVTLGRRPRPTRELSWVRGAPADAGSFGAVIAEPSATYRPGQAVEAVFVSALPNNDLRRGGTYLE VVRREGASWVRIADDGDWATSFRWQRQGRAGSHVSIRWDVPGDTTPGQYRIVHHGTARDRNGMLTAFSATTREFTVV
Sequences:
>Translated_637_residues MLSVGRGIADITGEAADCGMLGYGKSDQRTAGIHQRLRSRAFVFRDDSQDGDARLLLIVAELPLPMQNVNEEVLRRLADL YGDTYSEQNTLITATHTHAGPGGYCGYLLYNLTTSGFRPATFAAIVDGIVESVEHAHADVAPAEVPLSHGELYGASINRS PSAFDRNPPADKAFFPKRVDPHTTLVRIDRGEATVGVIHFFATHGTSMTNRNHLISGDNKGFAAYHWERTVGGADYLAGQ PDFIAAFAQTNPGDMSPNVDGPLSPEAPPDREFDNTRRTGLCQFEDAFTQLSGATPIGAGIDARFTYVDLGSVLVRGEYT PDGEERRTGRPMFGAGAMAGTDEGPGFHGFRQGRNPFWDRLSRAMYRLARPTAAAQAPKGIVMPARLPNRIHPFVQEIVP VQLVRIGRLYLIGIPGEPTIVAGLRLRRMVASIVGADLADVLCVGYTNAYIHYVTTPEEYLEQRYEGGSTLFGRWELCAL MQTVAELAEAMRDGRPVTLGRRPRPTRELSWVRGAPADAGSFGAVIAEPSATYRPGQAVEAVFVSALPNNDLRRGGTYLE VVRREGASWVRIADDGDWATSFRWQRQGRAGSHVSIRWDVPGDTTPGQYRIVHHGTARDRNGMLTAFSATTREFTVV >Mature_637_residues MLSVGRGIADITGEAADCGMLGYGKSDQRTAGIHQRLRSRAFVFRDDSQDGDARLLLIVAELPLPMQNVNEEVLRRLADL YGDTYSEQNTLITATHTHAGPGGYCGYLLYNLTTSGFRPATFAAIVDGIVESVEHAHADVAPAEVPLSHGELYGASINRS PSAFDRNPPADKAFFPKRVDPHTTLVRIDRGEATVGVIHFFATHGTSMTNRNHLISGDNKGFAAYHWERTVGGADYLAGQ PDFIAAFAQTNPGDMSPNVDGPLSPEAPPDREFDNTRRTGLCQFEDAFTQLSGATPIGAGIDARFTYVDLGSVLVRGEYT PDGEERRTGRPMFGAGAMAGTDEGPGFHGFRQGRNPFWDRLSRAMYRLARPTAAAQAPKGIVMPARLPNRIHPFVQEIVP VQLVRIGRLYLIGIPGEPTIVAGLRLRRMVASIVGADLADVLCVGYTNAYIHYVTTPEEYLEQRYEGGSTLFGRWELCAL MQTVAELAEAMRDGRPVTLGRRPRPTRELSWVRGAPADAGSFGAVIAEPSATYRPGQAVEAVFVSALPNNDLRRGGTYLE VVRREGASWVRIADDGDWATSFRWQRQGRAGSHVSIRWDVPGDTTPGQYRIVHHGTARDRNGMLTAFSATTREFTVV
Specific function: Hydrolyzes the ceramides into sphingosine and free fatty acid at an optimal pH of 8-9 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the neutral ceramidase family [H]
Homologues:
Organism=Homo sapiens, GI221218981, Length=684, Percent_Identity=32.6023391812866, Blast_Score=348, Evalue=9e-96, Organism=Homo sapiens, GI221307475, Length=660, Percent_Identity=33.6363636363636, Blast_Score=343, Evalue=4e-94, Organism=Drosophila melanogaster, GI24651405, Length=684, Percent_Identity=30.8479532163743, Blast_Score=291, Evalue=9e-79, Organism=Drosophila melanogaster, GI24651403, Length=684, Percent_Identity=30.8479532163743, Blast_Score=291, Evalue=9e-79, Organism=Drosophila melanogaster, GI24651401, Length=684, Percent_Identity=30.8479532163743, Blast_Score=291, Evalue=9e-79, Organism=Drosophila melanogaster, GI24651397, Length=684, Percent_Identity=30.8479532163743, Blast_Score=291, Evalue=9e-79, Organism=Drosophila melanogaster, GI24651399, Length=684, Percent_Identity=30.8479532163743, Blast_Score=291, Evalue=9e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006823 [H]
Pfam domain/function: NA
EC number: =3.5.1.23 [H]
Molecular weight: Translated: 69501; Mature: 69501
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVGRGIADITGEAADCGMLGYGKSDQRTAGIHQRLRSRAFVFRDDSQDGDARLLLIVA CCCCCCCHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEE ELPLPMQNVNEEVLRRLADLYGDTYSEQNTLITATHTHAGPGGYCGYLLYNLTTSGFRPA CCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHEECCCCCCCHH TFAAIVDGIVESVEHAHADVAPAEVPLSHGELYGASINRSPSAFDRNPPADKAFFPKRVD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC PHTTLVRIDRGEATVGVIHFFATHGTSMTNRNHLISGDNKGFAAYHWERTVGGADYLAGQ CCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCEECCCCCCEEEEEEEECCCCCHHCCCC PDFIAAFAQTNPGDMSPNVDGPLSPEAPPDREFDNTRRTGLCQFEDAFTQLSGATPIGAG CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC IDARFTYVDLGSVLVRGEYTPDGEERRTGRPMFGAGAMAGTDEGPGFHGFRQGRNPFWDR CCCEEEEEECCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHH LSRAMYRLARPTAAAQAPKGIVMPARLPNRIHPFVQEIVPVQLVRIGRLYLIGIPGEPTI HHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHEECCEEEEECCCCCCE VAGLRLRRMVASIVGADLADVLCVGYTNAYIHYVTTPEEYLEQRYEGGSTLFGRWELCAL EHHHHHHHHHHHHHCCCHHHHHHEEECCEEEEEEECHHHHHHHHHCCCCEEEHHHHHHHH MQTVAELAEAMRDGRPVTLGRRPRPTRELSWVRGAPADAGSFGAVIAEPSATYRPGQAVE HHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHH AVFVSALPNNDLRRGGTYLEVVRREGASWVRIADDGDWATSFRWQRQGRAGSHVSIRWDV HHHEECCCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCHHCEEHHHCCCCCCEEEEEEEC PGDTTPGQYRIVHHGTARDRNGMLTAFSATTREFTVV CCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure MLSVGRGIADITGEAADCGMLGYGKSDQRTAGIHQRLRSRAFVFRDDSQDGDARLLLIVA CCCCCCCHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEE ELPLPMQNVNEEVLRRLADLYGDTYSEQNTLITATHTHAGPGGYCGYLLYNLTTSGFRPA CCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHEECCCCCCCHH TFAAIVDGIVESVEHAHADVAPAEVPLSHGELYGASINRSPSAFDRNPPADKAFFPKRVD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC PHTTLVRIDRGEATVGVIHFFATHGTSMTNRNHLISGDNKGFAAYHWERTVGGADYLAGQ CCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCEECCCCCCEEEEEEEECCCCCHHCCCC PDFIAAFAQTNPGDMSPNVDGPLSPEAPPDREFDNTRRTGLCQFEDAFTQLSGATPIGAG CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC IDARFTYVDLGSVLVRGEYTPDGEERRTGRPMFGAGAMAGTDEGPGFHGFRQGRNPFWDR CCCEEEEEECCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHH LSRAMYRLARPTAAAQAPKGIVMPARLPNRIHPFVQEIVPVQLVRIGRLYLIGIPGEPTI HHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHEECCEEEEECCCCCCE VAGLRLRRMVASIVGADLADVLCVGYTNAYIHYVTTPEEYLEQRYEGGSTLFGRWELCAL EHHHHHHHHHHHHHCCCHHHHHHEEECCEEEEEEECHHHHHHHHHCCCCEEEHHHHHHHH MQTVAELAEAMRDGRPVTLGRRPRPTRELSWVRGAPADAGSFGAVIAEPSATYRPGQAVE HHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHH AVFVSALPNNDLRRGGTYLEVVRREGASWVRIADDGDWATSFRWQRQGRAGSHVSIRWDV HHHEECCCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCHHCEEHHHCCCCCCEEEEEEEC PGDTTPGQYRIVHHGTARDRNGMLTAFSATTREFTVV CCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10593963; 10984043 [H]