Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is mmpL5 [H]
Identifier: 121636597
GI number: 121636597
Start: 806995
End: 809889
Strand: Reverse
Name: mmpL5 [H]
Synonym: BCG_0725c
Alternate gene names: 121636597
Gene position: 809889-806995 (Counterclockwise)
Preceding gene: 121636598
Following gene: 121636590
Centisome position: 18.51
GC content: 63.49
Gene sequence:
>2895_bases ATGATCGTGCAAAGGACAGCTGCGCCGACGGGCTCCGTCCCGCCCGACAGGCACGCGGCGCGACCGTTCATCCCCAGAAT GATCCGTACCTTCGCGGTGCCGATCATCCTTGGGTGGTTGGTCACCATCGCCGTCCTCAACGTCACTGTGCCGCAACTGG AAACGGTCGGACAGATACAGGCGGTGTCGATGAGCCCCGACGCGGCACCGTCGATGATCTCGATGAAACACATCGGCAAG GTGTTCGAGGAGGGAGACTCCGACAGCGCGGCGATGATCGTGCTGGAGGGCCAGCGGCCGCTCGGTGACGCCGCCCATGC GTTTTACGACCAGATGATCGGCAGACTGCAAGCCGACACCACCCACGTCCAGTCCTTGCAGGACTTTTGGGGGGATCCAC TGACCGCCACCGGCGCCCAGAGCAGCGACGGCAAGGCCGCCTACGTTCAGGTGAAACTCGCGGGCAATCAGGGCGAGTCA CTGGCCAACGAGTCCGTGGAAGCGGTCAAGACCATCGTCGAGCGCCTTGCGCCGCCACCCGGTGTCAAGGTGTACGTCAC CGGTTCGGCCGCGCTGGTCGCCGATCAGCAGCAGGCCGGCGACCGTAGTCTGCAGGTGATCGAGGCGGTCACGTTCACCG TGATCATCGTGATGTTGCTGCTGGTCTACCGGTCGATCATCACGTCGGCGATCATGCTGACGATGGTGGTGCTCGGGCTG CTCGCCACCCGCGGGGGCGTGGCTTTCCTCGGTTTCCACCGGATCATTGGGCTCTCGACCTTCGCGACCAACCTGCTCGT GGTGCTGGCGATCGCGGCCGCCACCGACTACGCCATCTTCCTGATCGGCCGCTACCAGGAAGCACGCGGGCTCGGCCAGG ACCGGGAGTCGGCGTACTACACCATGTTCGGCGGCACCGCCCATGTCGTGCTGGGCTCGGGTCTGACCATCGCGGGTGCC ACGTTCTGTCTGAGCTTCACCCGACTGCCGTACTTTCAGACCCTCGGTGTGCCGTTGGCGATCGGGATGGTCATCGTCGT CGCCGCCGCACTCACCCTGGGCCCGGCGATAATCGCCGTGACGAGCCGGTTCGGCAAGCTGCTCGAGCCCAAGCGGATGG CGCGGGTGCGGGGCTGGCGCAAGGTCGGGGCCGCCATCGTCCGCTGGCCCGGCCCCATCCTGGTCGGTGCGGTGGCCCTG GCGCTCGTCGGTCTGCTGACCCTGCCGGGCTACCGGACCAACTACAACGACCGCAACTACCTGCCCGCCGACCTACCGGC CAACGAAGGCTATGCGGCCGCGGAGCGCCATTTCTCCCAGGCCCGGATGAACCCCGAGGTGCTGATGGTCGAAAGCGACC ACGACATGCGTAATTCGGCCGACTTTTTGGTGATCAACAAGATCGCCAAGGCCATTTTCGCCGTGGAGGGGATATCCCGG GTGCAGGCCATCACCCGGCCGGACGGCAAACCGATCGAGCACACCTCAATCCCGTTCCTGATCAGCATGCAGGGCACCAG CCAGAAACTGACCGAGAAATACAACCAGGACCTGACGGCCAGGATGCTGGAGCAGGTCAACGACATTCAGTCCAACATCG ACCAGATGGAGCGGATGCACAGCCTCACCCAGCAGATGGCCGATGTCACCCACGAAATGGTCATTCAGATGACGGGGATG GTGGTCGATGTCGAGGAGTTGCGCAACCATATTGCGGATTTCGACGATTTCTTCCGCCCCATCCGCAGCTACTTCTACTG GGAAAAGCACTGCTACGACATCCCGGTCTGCTGGTCGCTGCGGTCGGTGTTCGACACCCTCGACGGAATCGACGTCATGA CCGAAGACATCAACAACCTGCTGCCGCTCATGCAGCGCCTGGACACGCTCATGCCCCAGCTGACCGCGATGATGCCCGAG ATGATCCAGACCATGAAGAGCATGAAGGCGCAGATGCTGAGCATGCATTCCACCCAGGAAGGGCTGCAGGATCAGATGGC CGCGATGCAGGAGGATTCGGCGGCGATGGGCGAAGCCTTTGATGCTTCGCGCAACGACGACTCGTTCTATCTGCCTCCCG AGGTTTTCGACAATCCCGACTTCCAACGCGGCCTGGAACAGTTCCTCTCGCCGGACGGGCACGCGGTGCGGTTCATCATC AGCCACGAAGGCGACCCGATGAGCCAGGCGGGCATCGCGCGCATCGCCAAGATCAAGACCGCCGCCAAGGAAGCCATCAA GGGCACACCGTTGGAGGGATCCGCGATCTACCTGGGCGGTACCGCGGCGATGTTCAAGGACTTGTCCGACGGCAACACCT ATGACTTGATGATCGCCGGAATCTCCGCACTCTGCCTGATCTTCATCATCATGCTGATCATCACCCGCAGCGTCGTCGCG GCCGCCGTCATCGTCGGCACCGTGGTGTTGTCGCTGGGCGCCTCGTTCGGGCTGTCGGTGCTGATCTGGCAACACATCCT GGGTATCGAGCTGCACTGGTTGGTGTTGGCGATGGCGGTCATCATCCTGCTGGCCGTCGGCGCGGACTACAACCTGCTGC TGGTTGCCCGGCTCAAGGAGGAGATCCACGCCGGAATCAACACCGGCATCATCCGTGCGATGGGTGGCAGCGGGTCGGTG GTGACCGCCGCCGGGCTGGTGTTTGCCTTCACCATGATGTCGTTTGCCGTCAGCGAGCTGACCGTGATGGCCCAGGTTGG CACCACCATCGGTATGGGCCTGCTCTTCGACACCCTGATCGTCCGGTCGTTCATGACACCGTCGATCGCGGCCCTCCTCG GAAAGTGGTTCTGGTGGCCCCAGGTTGTCCGGCAACGACCCGTTCCGCAGCCGTGGCCCTCGCCGGCATCGGCACGGACC TTCGCCTTGGTCTGA
Upstream 100 bases:
>100_bases GCACTTCCATCACCTGCCGAATCACCGTCGATGGCGAAGTGAAGGACGAGCGGACCGCAACCGGCGTGGATGCCCTGACC TACTGCTTTGTGAAATCCGC
Downstream 100 bases:
>100_bases GCCGTACCCGCCTAAAGCGTGTCGCCCTGTTCGGCCCGAGGTGCCGGGGCCCCATGCCGACCGGCACCCGCGGCGAACCG TCTCGCCCCCTCTAGCGCCT
Product: putative transmembrane transport protein mmpL5
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 964; Mature: 964
Protein sequence:
>964_residues MIVQRTAAPTGSVPPDRHAARPFIPRMIRTFAVPIILGWLVTIAVLNVTVPQLETVGQIQAVSMSPDAAPSMISMKHIGK VFEEGDSDSAAMIVLEGQRPLGDAAHAFYDQMIGRLQADTTHVQSLQDFWGDPLTATGAQSSDGKAAYVQVKLAGNQGES LANESVEAVKTIVERLAPPPGVKVYVTGSAALVADQQQAGDRSLQVIEAVTFTVIIVMLLLVYRSIITSAIMLTMVVLGL LATRGGVAFLGFHRIIGLSTFATNLLVVLAIAAATDYAIFLIGRYQEARGLGQDRESAYYTMFGGTAHVVLGSGLTIAGA TFCLSFTRLPYFQTLGVPLAIGMVIVVAAALTLGPAIIAVTSRFGKLLEPKRMARVRGWRKVGAAIVRWPGPILVGAVAL ALVGLLTLPGYRTNYNDRNYLPADLPANEGYAAAERHFSQARMNPEVLMVESDHDMRNSADFLVINKIAKAIFAVEGISR VQAITRPDGKPIEHTSIPFLISMQGTSQKLTEKYNQDLTARMLEQVNDIQSNIDQMERMHSLTQQMADVTHEMVIQMTGM VVDVEELRNHIADFDDFFRPIRSYFYWEKHCYDIPVCWSLRSVFDTLDGIDVMTEDINNLLPLMQRLDTLMPQLTAMMPE MIQTMKSMKAQMLSMHSTQEGLQDQMAAMQEDSAAMGEAFDASRNDDSFYLPPEVFDNPDFQRGLEQFLSPDGHAVRFII SHEGDPMSQAGIARIAKIKTAAKEAIKGTPLEGSAIYLGGTAAMFKDLSDGNTYDLMIAGISALCLIFIIMLIITRSVVA AAVIVGTVVLSLGASFGLSVLIWQHILGIELHWLVLAMAVIILLAVGADYNLLLVARLKEEIHAGINTGIIRAMGGSGSV VTAAGLVFAFTMMSFAVSELTVMAQVGTTIGMGLLFDTLIVRSFMTPSIAALLGKWFWWPQVVRQRPVPQPWPSPASART FALV
Sequences:
>Translated_964_residues MIVQRTAAPTGSVPPDRHAARPFIPRMIRTFAVPIILGWLVTIAVLNVTVPQLETVGQIQAVSMSPDAAPSMISMKHIGK VFEEGDSDSAAMIVLEGQRPLGDAAHAFYDQMIGRLQADTTHVQSLQDFWGDPLTATGAQSSDGKAAYVQVKLAGNQGES LANESVEAVKTIVERLAPPPGVKVYVTGSAALVADQQQAGDRSLQVIEAVTFTVIIVMLLLVYRSIITSAIMLTMVVLGL LATRGGVAFLGFHRIIGLSTFATNLLVVLAIAAATDYAIFLIGRYQEARGLGQDRESAYYTMFGGTAHVVLGSGLTIAGA TFCLSFTRLPYFQTLGVPLAIGMVIVVAAALTLGPAIIAVTSRFGKLLEPKRMARVRGWRKVGAAIVRWPGPILVGAVAL ALVGLLTLPGYRTNYNDRNYLPADLPANEGYAAAERHFSQARMNPEVLMVESDHDMRNSADFLVINKIAKAIFAVEGISR VQAITRPDGKPIEHTSIPFLISMQGTSQKLTEKYNQDLTARMLEQVNDIQSNIDQMERMHSLTQQMADVTHEMVIQMTGM VVDVEELRNHIADFDDFFRPIRSYFYWEKHCYDIPVCWSLRSVFDTLDGIDVMTEDINNLLPLMQRLDTLMPQLTAMMPE MIQTMKSMKAQMLSMHSTQEGLQDQMAAMQEDSAAMGEAFDASRNDDSFYLPPEVFDNPDFQRGLEQFLSPDGHAVRFII SHEGDPMSQAGIARIAKIKTAAKEAIKGTPLEGSAIYLGGTAAMFKDLSDGNTYDLMIAGISALCLIFIIMLIITRSVVA AAVIVGTVVLSLGASFGLSVLIWQHILGIELHWLVLAMAVIILLAVGADYNLLLVARLKEEIHAGINTGIIRAMGGSGSV VTAAGLVFAFTMMSFAVSELTVMAQVGTTIGMGLLFDTLIVRSFMTPSIAALLGKWFWWPQVVRQRPVPQPWPSPASART FALV >Mature_964_residues MIVQRTAAPTGSVPPDRHAARPFIPRMIRTFAVPIILGWLVTIAVLNVTVPQLETVGQIQAVSMSPDAAPSMISMKHIGK VFEEGDSDSAAMIVLEGQRPLGDAAHAFYDQMIGRLQADTTHVQSLQDFWGDPLTATGAQSSDGKAAYVQVKLAGNQGES LANESVEAVKTIVERLAPPPGVKVYVTGSAALVADQQQAGDRSLQVIEAVTFTVIIVMLLLVYRSIITSAIMLTMVVLGL LATRGGVAFLGFHRIIGLSTFATNLLVVLAIAAATDYAIFLIGRYQEARGLGQDRESAYYTMFGGTAHVVLGSGLTIAGA TFCLSFTRLPYFQTLGVPLAIGMVIVVAAALTLGPAIIAVTSRFGKLLEPKRMARVRGWRKVGAAIVRWPGPILVGAVAL ALVGLLTLPGYRTNYNDRNYLPADLPANEGYAAAERHFSQARMNPEVLMVESDHDMRNSADFLVINKIAKAIFAVEGISR VQAITRPDGKPIEHTSIPFLISMQGTSQKLTEKYNQDLTARMLEQVNDIQSNIDQMERMHSLTQQMADVTHEMVIQMTGM VVDVEELRNHIADFDDFFRPIRSYFYWEKHCYDIPVCWSLRSVFDTLDGIDVMTEDINNLLPLMQRLDTLMPQLTAMMPE MIQTMKSMKAQMLSMHSTQEGLQDQMAAMQEDSAAMGEAFDASRNDDSFYLPPEVFDNPDFQRGLEQFLSPDGHAVRFII SHEGDPMSQAGIARIAKIKTAAKEAIKGTPLEGSAIYLGGTAAMFKDLSDGNTYDLMIAGISALCLIFIIMLIITRSVVA AAVIVGTVVLSLGASFGLSVLIWQHILGIELHWLVLAMAVIILLAVGADYNLLLVARLKEEIHAGINTGIIRAMGGSGSV VTAAGLVFAFTMMSFAVSELTVMAQVGTTIGMGLLFDTLIVRSFMTPSIAALLGKWFWWPQVVRQRPVPQPWPSPASART FALV
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 104785; Mature: 104785
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVQRTAAPTGSVPPDRHAARPFIPRMIRTFAVPIILGWLVTIAVLNVTVPQLETVGQIQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEE AVSMSPDAAPSMISMKHIGKVFEEGDSDSAAMIVLEGQRPLGDAAHAFYDQMIGRLQADT EEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCH THVQSLQDFWGDPLTATGAQSSDGKAAYVQVKLAGNQGESLANESVEAVKTIVERLAPPP HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GVKVYVTGSAALVADQQQAGDRSLQVIEAVTFTVIIVMLLLVYRSIITSAIMLTMVVLGL CEEEEEECCEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATRGGVAFLGFHRIIGLSTFATNLLVVLAIAAATDYAIFLIGRYQEARGLGQDRESAYY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHCCCCCCCCCCEE TMFGGTAHVVLGSGLTIAGATFCLSFTRLPYFQTLGVPLAIGMVIVVAAALTLGPAIIAV EEECCEEEEEECCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TSRFGKLLEPKRMARVRGWRKVGAAIVRWPGPILVGAVALALVGLLTLPGYRTNYNDRNY HHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LPADLPANEGYAAAERHFSQARMNPEVLMVESDHDMRNSADFLVINKIAKAIFAVEGISR CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH VQAITRPDGKPIEHTSIPFLISMQGTSQKLTEKYNQDLTARMLEQVNDIQSNIDQMERMH HHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH SLTQQMADVTHEMVIQMTGMVVDVEELRNHIADFDDFFRPIRSYFYWEKHCYDIPVCWSL HHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH RSVFDTLDGIDVMTEDINNLLPLMQRLDTLMPQLTAMMPEMIQTMKSMKAQMLSMHSTQE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLQDQMAAMQEDSAAMGEAFDASRNDDSFYLPPEVFDNPDFQRGLEQFLSPDGHAVRFII HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHCCCCCHHHHHHHHHCCCCCEEEEEE SHEGDPMSQAGIARIAKIKTAAKEAIKGTPLEGSAIYLGGTAAMFKDLSDGNTYDLMIAG ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCEEHHHHH ISALCLIFIIMLIITRSVVAAAVIVGTVVLSLGASFGLSVLIWQHILGIELHWLVLAMAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILLAVGADYNLLLVARLKEEIHAGINTGIIRAMGGSGSVVTAAGLVFAFTMMSFAVSEL HHHHHHCCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH TVMAQVGTTIGMGLLFDTLIVRSFMTPSIAALLGKWFWWPQVVRQRPVPQPWPSPASART HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE FALV EECC >Mature Secondary Structure MIVQRTAAPTGSVPPDRHAARPFIPRMIRTFAVPIILGWLVTIAVLNVTVPQLETVGQIQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEE AVSMSPDAAPSMISMKHIGKVFEEGDSDSAAMIVLEGQRPLGDAAHAFYDQMIGRLQADT EEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCH THVQSLQDFWGDPLTATGAQSSDGKAAYVQVKLAGNQGESLANESVEAVKTIVERLAPPP HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GVKVYVTGSAALVADQQQAGDRSLQVIEAVTFTVIIVMLLLVYRSIITSAIMLTMVVLGL CEEEEEECCEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATRGGVAFLGFHRIIGLSTFATNLLVVLAIAAATDYAIFLIGRYQEARGLGQDRESAYY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHCCCCCCCCCCEE TMFGGTAHVVLGSGLTIAGATFCLSFTRLPYFQTLGVPLAIGMVIVVAAALTLGPAIIAV EEECCEEEEEECCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TSRFGKLLEPKRMARVRGWRKVGAAIVRWPGPILVGAVALALVGLLTLPGYRTNYNDRNY HHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LPADLPANEGYAAAERHFSQARMNPEVLMVESDHDMRNSADFLVINKIAKAIFAVEGISR CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH VQAITRPDGKPIEHTSIPFLISMQGTSQKLTEKYNQDLTARMLEQVNDIQSNIDQMERMH HHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH SLTQQMADVTHEMVIQMTGMVVDVEELRNHIADFDDFFRPIRSYFYWEKHCYDIPVCWSL HHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH RSVFDTLDGIDVMTEDINNLLPLMQRLDTLMPQLTAMMPEMIQTMKSMKAQMLSMHSTQE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLQDQMAAMQEDSAAMGEAFDASRNDDSFYLPPEVFDNPDFQRGLEQFLSPDGHAVRFII HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHCCCCCHHHHHHHHHCCCCCEEEEEE SHEGDPMSQAGIARIAKIKTAAKEAIKGTPLEGSAIYLGGTAAMFKDLSDGNTYDLMIAG ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCEEHHHHH ISALCLIFIIMLIITRSVVAAAVIVGTVVLSLGASFGLSVLIWQHILGIELHWLVLAMAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILLAVGADYNLLLVARLKEEIHAGINTGIIRAMGGSGSVVTAAGLVFAFTMMSFAVSEL HHHHHHCCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH TVMAQVGTTIGMGLLFDTLIVRSFMTPSIAALLGKWFWWPQVVRQRPVPQPWPSPASART HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE FALV EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]