Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is serB1 [C]
Identifier: 121636423
GI number: 121636423
Start: 626262
End: 627383
Strand: Reverse
Name: serB1 [C]
Synonym: BCG_0548c
Alternate gene names: 121636423
Gene position: 627383-626262 (Counterclockwise)
Preceding gene: 121636434
Following gene: 121636422
Centisome position: 14.34
GC content: 67.47
Gene sequence:
>1122_bases ATGGGGCTGACATGTTGGCCCCGAACCGCTGCGGGTCGTGTTCACGACGAAAGTCGCTGCGGCCTCGCGAATTTCGATAC CGCGCTGGGCTTGCAGATCAATCCGCGCCAGCCAAGAGCTCCGCCGCGCATTTGCCGGATAGGGTTGATAACGGCCGCAG CATCGGCCACCGGGCAGGCACCGCGATTAGGAGTAATGATGGTTTCCTCCCACCTGGGTAGCCCAGACCAGGCCGGTCAC GTCGACCTGGCTTCGCCGGCCGACCCGCCGCCACCCGATGCCAGCGCCAGCCACTCGCCGGTGGACATGCCGGCCCCCGT CGCCGCCGCCGGCAGCGATCGGCAGCCGCCGATCGACCTGACCGCAGCCGCCTTCTTCGACGTGGACAACACCTTGGTTC AGGGCTCGTCGGCGGTGCACTTCGGCCGCGGGCTAGCCGCTCGCCACTACTTCACCTACCGCGACGTCCTCGGATTTCTT TACGCTCAGGCCAAGTTCCAGCTACTTGGCAAGGAGAACAGCAACGACGTCGCCGCTGGCCGGCGCAAGGCGCTCGCGTT CATCGAGGGCCGATCCGTCGCGGAGTTGGTGGCCTTGGGAGAGGAGATTTACGACGAGATCATCGCCGACAAGATCTGGG ACGGCACCCGCGAACTCACCCAGATGCACCTGGACGCCGGCCAGCAGGTATGGCTGATCACCGCTACCCCATACGAACTC GCGGCCACCATCGCCCGCCGGCTCGGCCTAACCGGCGCCCTGGGCACCGTCGCCGAGTCGGTCGACGGGATATTCACCGG CAGACTGGTCGGCGAGATCCTGCACGGCACCGGCAAGGCACACGCGGTGCGGTCGCTGGCCATCCGGGAGGGACTCAATC TCAAACGCTGCACCGCCTACTCCGACAGCTACAACGACGTCCCGATGCTGTCGCTGGTGGGCACCGCGGTCGCCATCAAC CCCGACGCCCGCCTGCGCAGCCTGGCCCGGGAACGGGGGTGGGAGATCCGTGATTTCCGAATCGCCCGCAAGGCCGCTCG GATCGGGGTTCCGTCGGCCCTGGCGCTGGGTGCGGCCGGCGGCGCGTTGGCGGCTCTAGCCTCTAGACGCCAATCACGCT GA
Upstream 100 bases:
>100_bases CGTAGTAATCGGATGTCTCGTTGCGTTAGCTAGCGTAGACGCTACCGTTGACAGGCTGAAGAATTCAGGATTTCACGTAC CCAGCTTTGCGCGTACCGGT
Downstream 100 bases:
>100_bases TAAGCTGCGCCGTTAGCCTGGCGACGATGCGGCCCGCGCAGCGGGGCGAGGAGGAGCCGGGCAATAGGGCCCAGCCTGGC GACGATGCGACCCGCGCAGC
Product: putative phosphoserine phosphatase serB1
Products: L-serine; D-serine; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGLTCWPRTAAGRVHDESRCGLANFDTALGLQINPRQPRAPPRICRIGLITAAASATGQAPRLGVMMVSSHLGSPDQAGH VDLASPADPPPPDASASHSPVDMPAPVAAAGSDRQPPIDLTAAAFFDVDNTLVQGSSAVHFGRGLAARHYFTYRDVLGFL YAQAKFQLLGKENSNDVAAGRRKALAFIEGRSVAELVALGEEIYDEIIADKIWDGTRELTQMHLDAGQQVWLITATPYEL AATIARRLGLTGALGTVAESVDGIFTGRLVGEILHGTGKAHAVRSLAIREGLNLKRCTAYSDSYNDVPMLSLVGTAVAIN PDARLRSLARERGWEIRDFRIARKAARIGVPSALALGAAGGALAALASRRQSR
Sequences:
>Translated_373_residues MGLTCWPRTAAGRVHDESRCGLANFDTALGLQINPRQPRAPPRICRIGLITAAASATGQAPRLGVMMVSSHLGSPDQAGH VDLASPADPPPPDASASHSPVDMPAPVAAAGSDRQPPIDLTAAAFFDVDNTLVQGSSAVHFGRGLAARHYFTYRDVLGFL YAQAKFQLLGKENSNDVAAGRRKALAFIEGRSVAELVALGEEIYDEIIADKIWDGTRELTQMHLDAGQQVWLITATPYEL AATIARRLGLTGALGTVAESVDGIFTGRLVGEILHGTGKAHAVRSLAIREGLNLKRCTAYSDSYNDVPMLSLVGTAVAIN PDARLRSLARERGWEIRDFRIARKAARIGVPSALALGAAGGALAALASRRQSR >Mature_372_residues GLTCWPRTAAGRVHDESRCGLANFDTALGLQINPRQPRAPPRICRIGLITAAASATGQAPRLGVMMVSSHLGSPDQAGHV DLASPADPPPPDASASHSPVDMPAPVAAAGSDRQPPIDLTAAAFFDVDNTLVQGSSAVHFGRGLAARHYFTYRDVLGFLY AQAKFQLLGKENSNDVAAGRRKALAFIEGRSVAELVALGEEIYDEIIADKIWDGTRELTQMHLDAGQQVWLITATPYELA ATIARRLGLTGALGTVAESVDGIFTGRLVGEILHGTGKAHAVRSLAIREGLNLKRCTAYSDSYNDVPMLSLVGTAVAINP DARLRSLARERGWEIRDFRIARKAARIGVPSALALGAAGGALAALASRRQSR
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 3.1.3.3
Molecular weight: Translated: 39508; Mature: 39377
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTCWPRTAAGRVHDESRCGLANFDTALGLQINPRQPRAPPRICRIGLITAAASATGQA CCCCCCCCCCCCCCCCCCCCCCCCCCCEECEEECCCCCCCCHHHHHHHHHHHHHCCCCCC PRLGVMMVSSHLGSPDQAGHVDLASPADPPPPDASASHSPVDMPAPVAAAGSDRQPPIDL CCHHHEEHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TAAAFFDVDNTLVQGSSAVHFGRGLAARHYFTYRDVLGFLYAQAKFQLLGKENSNDVAAG EHHEEECCCHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHH RRKALAFIEGRSVAELVALGEEIYDEIIADKIWDGTRELTQMHLDAGQQVWLITATPYEL HHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECHHHH AATIARRLGLTGALGTVAESVDGIFTGRLVGEILHGTGKAHAVRSLAIREGLNLKRCTAY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEEEC SDSYNDVPMLSLVGTAVAINPDARLRSLARERGWEIRDFRIARKAARIGVPSALALGAAG CCCCCCCHHHHHHCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCC GALAALASRRQSR HHHHHHHHHHCCC >Mature Secondary Structure GLTCWPRTAAGRVHDESRCGLANFDTALGLQINPRQPRAPPRICRIGLITAAASATGQA CCCCCCCCCCCCCCCCCCCCCCCCCCEECEEECCCCCCCCHHHHHHHHHHHHHCCCCCC PRLGVMMVSSHLGSPDQAGHVDLASPADPPPPDASASHSPVDMPAPVAAAGSDRQPPIDL CCHHHEEHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TAAAFFDVDNTLVQGSSAVHFGRGLAARHYFTYRDVLGFLYAQAKFQLLGKENSNDVAAG EHHEEECCCHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHH RRKALAFIEGRSVAELVALGEEIYDEIIADKIWDGTRELTQMHLDAGQQVWLITATPYEL HHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECHHHH AATIARRLGLTGALGTVAESVDGIFTGRLVGEILHGTGKAHAVRSLAIREGLNLKRCTAY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEEEC SDSYNDVPMLSLVGTAVAINPDARLRSLARERGWEIRDFRIARKAARIGVPSALALGAAG CCCCCCCHHHHHHCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCC GALAALASRRQSR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-O-phosphoserine; D-O-phosphoserine; H2O
Specific reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate
General reaction: phosphoric ester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]