Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636434
Identifier: 121636434
GI number: 121636434
Start: 638857
End: 639333
Strand: Reverse
Name: 121636434
Synonym: BCG_0559c
Alternate gene names: NA
Gene position: 639333-638857 (Counterclockwise)
Preceding gene: 121636437
Following gene: 121636423
Centisome position: 14.61
GC content: 62.47
Gene sequence:
>477_bases ATGACTACCACGATCCCGACGTCAAAATCGGCTTGCAGCGTCACGACGCGGCCCGGAAATGCCGCCGTTGACTACGGTGG CGCTCAGATTCGGGCCTACCTGCATCACCTGGCGACAGTGGTGACCATCCGAGGCGAGATCGACGCCGCCAATGTCGAGC AGATCAGCGAGCACGTCCGGCGTTTCAGCCTCGGAACAAATCCGATGGTGCTCGACCTGAGCGAGTTGAGTCACTTCAGT GGGGCCGGCATCTCGCTCTTGTGCATCCTCGATGAGGACTGCCGAGCCGCCGGCGTCCAGTGGGCATTAGTCGCGAGCCC CGCAGTAGTCGAACAGCTAGGTGGCCGCTGTGACCAGGGCGAGCATGAATCCATGTTCCCGATGGCGCGCTCGGTGCATA AAGCGCTCCACGACCTGGCTGACGCCATCGACCGCCGCCGTCAGCTGGTGCTACCGCTAATCAGCAGGTCAGCCTAA
Upstream 100 bases:
>100_bases AGAGGCGGCTTTCGCTCCCCTTAGATTTTGCGGGTTTGGTTAAAGGCAGCTTTAGCCGGCGATCGGTCGGCCCGCAACGC GACGGAGAACGAGGCTATTG
Downstream 100 bases:
>100_bases AACGGCGGTGGGTCGTCGTTGTGATCCGGTGGTGGGCCGTGGGTGTCGGTGGCCGCGGCGGTCTGGGTGAGCACCTGGGC GCGCTGGCGGGCGGCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: STAS Domain-Containing Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTTTIPTSKSACSVTTRPGNAAVDYGGAQIRAYLHHLATVVTIRGEIDAANVEQISEHVRRFSLGTNPMVLDLSELSHFS GAGISLLCILDEDCRAAGVQWALVASPAVVEQLGGRCDQGEHESMFPMARSVHKALHDLADAIDRRRQLVLPLISRSA
Sequences:
>Translated_158_residues MTTTIPTSKSACSVTTRPGNAAVDYGGAQIRAYLHHLATVVTIRGEIDAANVEQISEHVRRFSLGTNPMVLDLSELSHFS GAGISLLCILDEDCRAAGVQWALVASPAVVEQLGGRCDQGEHESMFPMARSVHKALHDLADAIDRRRQLVLPLISRSA >Mature_157_residues TTTIPTSKSACSVTTRPGNAAVDYGGAQIRAYLHHLATVVTIRGEIDAANVEQISEHVRRFSLGTNPMVLDLSELSHFSG AGISLLCILDEDCRAAGVQWALVASPAVVEQLGGRCDQGEHESMFPMARSVHKALHDLADAIDRRRQLVLPLISRSA
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16988; Mature: 16856
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTIPTSKSACSVTTRPGNAAVDYGGAQIRAYLHHLATVVTIRGEIDAANVEQISEHVR CCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RFSLGTNPMVLDLSELSHFSGAGISLLCILDEDCRAAGVQWALVASPAVVEQLGGRCDQG HHCCCCCCEEEEHHHHCCCCCCCEEEEEEECCCCHHCCCEEEEECCHHHHHHHCCCCCCC EHESMFPMARSVHKALHDLADAIDRRRQLVLPLISRSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTTIPTSKSACSVTTRPGNAAVDYGGAQIRAYLHHLATVVTIRGEIDAANVEQISEHVR CCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RFSLGTNPMVLDLSELSHFSGAGISLLCILDEDCRAAGVQWALVASPAVVEQLGGRCDQG HHCCCCCCEEEEHHHHCCCCCCCEEEEEEECCCCHHCCCEEEEECCHHHHHHHCCCCCCC EHESMFPMARSVHKALHDLADAIDRRRQLVLPLISRSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA