Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636395
Identifier: 121636395
GI number: 121636395
Start: 598736
End: 599782
Strand: Reverse
Name: 121636395
Synonym: BCG_0520c
Alternate gene names: NA
Gene position: 599782-598736 (Counterclockwise)
Preceding gene: 121636396
Following gene: 121636388
Centisome position: 13.71
GC content: 62.75
Gene sequence:
>1047_bases GTGACCAACCCGCAAGGTCCACCGAACGACCCGTCGCCCTGGGCGCGCCCTGGGGATCAAGGTCCGCTCGCCCGACCCCC GGCATCGTCCGAAGCATCCACCGGTCGACTGCGCCCCGGCGAGCCCGCGGGTCATATCCAAGAACCGGTGAGTCCGCCCA CCCAACCGGAGCAGCAGCCGCAAACTGAGCATCTGGCTGCGTCGCATGCCCACACACGGCGATCCGGCCGCCAAGCTGCG CACCAGGCGTGGGACCCAACGGGCCTGCTGGCTGCGCAAGAGGAAGAGCCAGCGGCGGTGAAGACCAAACGACGTGCCCG CCGCGACCCGCTAACCGTCTTTCTTGTCCTGATCATCGTGTTTTCGCTCGTCCTCGCCGGGCTGATCGGAGGCGAGCTAT ACGCTCGCCATGTTGCCAATAGCAAGGTCGCCCAAGCGGTCGCATGCGTGGTCAAAGACCAAGCCACCGCATCCTTCGGT GTGGCGCCGCTGCTGCTGTGGCAGGTCGCTACGCGGCACTTCACCAATATCTCGGTGGAAACCGCGGGCAATCAGATCCG CGATGCCAAGGGCATGCAGATAAAGCTCACGATCCAGAACGTCCGGCTCAAGAACACCCCCAACTCTAGGGGCACGATCG GCGCCCTGGACGCCACCATTACCTGGTCGTCGGAAGGCATCAAGGAATCGGTGCAAAACGCGATTCCGATCCTGGGCGCT TTCGTCACCAGCAGCGTGGTCACTCACCCCGCAGACGGCACCGTCGAACTGAAGGGCCTGCTGAACAACATCACAGCCAA GCCGATAGTGGCTGGCAAAGGATTGGAGCTGCAGATCATCAATTTCAACACGCTCGGGTTCTCGCTGCCGAAAGAAACCG TTCAGTCGACGCTGAACGAGTTCACCTCCAGCCTGACCAAGAACTACCCGTTGGGGATTCACGCGGACAGCGTGCAAGTC ACCTCGACCGGCGTGGTGAGCCGGTTCTCAACTCGCGACGCGGCTATCCCCACCGGCATCCAGAATCCCTGCTTCTCGCA CATTTGA
Upstream 100 bases:
>100_bases CCGACATCGATGTCGACAATGTGGCCGCGGCTCGCGACCGCATTGCGGTGCTACGCAACCAGACAGACTTCGTTCAGATC GATAAGGCACAATCGCGTGG
Downstream 100 bases:
>100_bases CGCCGCCACCCGCGCGCTCAGCTGTCAGCTGAGCCCATCGAGCACCGCCCGGGTGCCGGACAGGCCCAACCTGGTGGCAC CGGCGTTGAGCATCGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQPQTEHLAASHAHTRRSGRQAA HQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFG VAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQV TSTGVVSRFSTRDAAIPTGIQNPCFSHI
Sequences:
>Translated_348_residues MTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQPQTEHLAASHAHTRRSGRQAA HQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFG VAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQV TSTGVVSRFSTRDAAIPTGIQNPCFSHI >Mature_347_residues TNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQPQTEHLAASHAHTRRSGRQAAH QAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGV APLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAF VTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVT STGVVSRFSTRDAAIPTGIQNPCFSHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y479_MYCTU (P64699)
Other databases:
- EMBL: BX842573 - EMBL: AE000516 - PIR: B70743 - RefSeq: NP_214993.1 - RefSeq: NP_334906.1 - ProteinModelPortal: P64699 - EnsemblBacteria: EBMYCT00000002465 - EnsemblBacteria: EBMYCT00000071223 - GeneID: 885535 - GeneID: 923849 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0497 - KEGG: mtu:Rv0479c - TIGR: MT0497 - TubercuList: Rv0479c - GeneTree: EBGT00050000014906 - HOGENOM: HBG568226 - OMA: DAKGMKL - ProtClustDB: CLSK790545 - GO: GO:0040007
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37048; Mature: 36917
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1458a994)-; HASH(0x12ca77e8)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHH FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEE TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA CCCCHHHCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHH FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE HHHHHHHCCCCCCCEEHHHHHHCCCCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI HHHHHHCCCCCEEECCCEEEECCHHHHHHCCCCCCCCCCCCCCHHCCH >Mature Secondary Structure TNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHH FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEE TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA CCCCHHHCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHH FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE HHHHHHHCCCCCCCEEHHHHHHCCCCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI HHHHHHCCCCCEEECCCEEEECCHHHHHHCCCCCCCCCCCCCCHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036