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The map label for this gene is yafV [C]

Identifier: 121636396

GI number: 121636396

Start: 599779

End: 600714

Strand: Reverse

Name: yafV [C]

Synonym: BCG_0521c

Alternate gene names: 121636396

Gene position: 600714-599779 (Counterclockwise)

Preceding gene: 121636397

Following gene: 121636395

Centisome position: 13.73

GC content: 69.02

Gene sequence:

>936_bases
GTGCGGCGCGCTCGTCGCCGGGCGCAAGCTGGATTGCCCGGCTCCTGCGCGCGCCGGTGCGGCGCGCTCGTCGCCGGGCC
TAGGCTGGCGCGCATGCGAATCGCGTTGGCGCAAATCCGCAGCGGTACCGACCCCGCCGCCAATCTGCAACTGGTCGGCA
AGTACGCCGGCGAAGCCGCCACCGCGGGCGCACAGCTGGTGGTGTTTCCTGAGGCGACCATGTGCCGGCTCGGTGTCCCG
CTGCGGCAGGTCGCCGAGCCCGTCGACGGACCCTGGGCAAACGGAGTCCGACGGATCGCGACCGAGGCGGGCATCACCGT
GATCGCCGGCATGTTCACCCCGACCGGCGACGGGCGGGTAACAAACACGCTGATCGCAGCCGGCCCGGGCACGCCCAATC
AGCCGGACGCGCACTACCACAAGATCCACCTCTATGACGCGTTCGGCTTCACCGAGTCACGTACCGTCGCACCCGGGCGC
GAACCGGTGGTAGTCGTGGTCGACGGCGTGCGGGTGGGTTTGACCGTTTGCTACGACATTCGCTTTCCCGCCCTTTATAC
CGAGCTGGCGCGGCGCGGGGCCCAACTGATCGCGGTCTGTGCATCCTGGGGTTCCGGTCCGGGCAAACTCGAACAGTGGA
CGTTGCTGGCCCGCGCCCGGGCGCTAGACTCCATGAGTTACGTCGCCGCGGCCGGCCAAGCAGACCCAGGTGATGCCCGC
ACCGGCGTGGGGGCGAGCTCGGCTGCACCGACCGGGGTAGGCGGCAGCCTGGTGGCCTCGCCGCTAGGCGAGGTGGTGGT
GTCAGCTGGCACCCAGCCGCAACTGCTGGTCGCCGACATCGATGTCGACAATGTGGCCGCGGCTCGCGACCGCATTGCGG
TGCTACGCAACCAGACAGACTTCGTTCAGATCGATAAGGCACAATCGCGTGGGTGA

Upstream 100 bases:

>100_bases
CCCAATTAAGCCAGCTAGTGACCATCGAACAGCGCTTCACCACGCTGTGGATCACGAACAACGTCTGAGGTGCCAGCTTG
CCCGGCTCCTGCGCGCGCCG

Downstream 100 bases:

>100_bases
CCAACCCGCAAGGTCCACCGAACGACCCGTCGCCCTGGGCGCGCCCTGGGGATCAAGGTCCGCTCGCCCGACCCCCGGCA
TCGTCCGAAGCATCCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRRARRRAQAGLPGSCARRCGALVAGPRLARMRIALAQIRSGTDPAANLQLVGKYAGEAATAGAQLVVFPEATMCRLGVP
LRQVAEPVDGPWANGVRRIATEAGITVIAGMFTPTGDGRVTNTLIAAGPGTPNQPDAHYHKIHLYDAFGFTESRTVAPGR
EPVVVVVDGVRVGLTVCYDIRFPALYTELARRGAQLIAVCASWGSGPGKLEQWTLLARARALDSMSYVAAAGQADPGDAR
TGVGASSAAPTGVGGSLVASPLGEVVVSAGTQPQLLVADIDVDNVAAARDRIAVLRNQTDFVQIDKAQSRG

Sequences:

>Translated_311_residues
MRRARRRAQAGLPGSCARRCGALVAGPRLARMRIALAQIRSGTDPAANLQLVGKYAGEAATAGAQLVVFPEATMCRLGVP
LRQVAEPVDGPWANGVRRIATEAGITVIAGMFTPTGDGRVTNTLIAAGPGTPNQPDAHYHKIHLYDAFGFTESRTVAPGR
EPVVVVVDGVRVGLTVCYDIRFPALYTELARRGAQLIAVCASWGSGPGKLEQWTLLARARALDSMSYVAAAGQADPGDAR
TGVGASSAAPTGVGGSLVASPLGEVVVSAGTQPQLLVADIDVDNVAAARDRIAVLRNQTDFVQIDKAQSRG
>Mature_311_residues
MRRARRRAQAGLPGSCARRCGALVAGPRLARMRIALAQIRSGTDPAANLQLVGKYAGEAATAGAQLVVFPEATMCRLGVP
LRQVAEPVDGPWANGVRRIATEAGITVIAGMFTPTGDGRVTNTLIAAGPGTPNQPDAHYHKIHLYDAFGFTESRTVAPGR
EPVVVVVDGVRVGLTVCYDIRFPALYTELARRGAQLIAVCASWGSGPGKLEQWTLLARARALDSMSYVAAAGQADPGDAR
TGVGASSAAPTGVGGSLVASPLGEVVVSAGTQPQLLVADIDVDNVAAARDRIAVLRNQTDFVQIDKAQSRG

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=279, Percent_Identity=32.6164874551971, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI297632348, Length=279, Percent_Identity=29.7491039426523, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI297632350, Length=279, Percent_Identity=29.7491039426523, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI5031947, Length=277, Percent_Identity=29.6028880866426, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17556280, Length=283, Percent_Identity=28.2685512367491, Blast_Score=92, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6322335, Length=301, Percent_Identity=27.5747508305648, Blast_Score=99, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6323383, Length=284, Percent_Identity=26.056338028169, Blast_Score=89, Evalue=8e-19,
Organism=Drosophila melanogaster, GI21355835, Length=273, Percent_Identity=28.2051282051282, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI17933642, Length=261, Percent_Identity=28.3524904214559, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 32312; Mature: 32312

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRARRRAQAGLPGSCARRCGALVAGPRLARMRIALAQIRSGTDPAANLQLVGKYAGEAA
CCHHHHHHHCCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
TAGAQLVVFPEATMCRLGVPLRQVAEPVDGPWANGVRRIATEAGITVIAGMFTPTGDGRV
CCCCEEEEECCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCE
TNTLIAAGPGTPNQPDAHYHKIHLYDAFGFTESRTVAPGREPVVVVVDGVRVGLTVCYDI
EEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEC
RFPALYTELARRGAQLIAVCASWGSGPGKLEQWTLLARARALDSMSYVAAAGQADPGDAR
CCHHHHHHHHHCCHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TGVGASSAAPTGVGGSLVASPLGEVVVSAGTQPQLLVADIDVDNVAAARDRIAVLRNQTD
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC
FVQIDKAQSRG
EEEEECCCCCC
>Mature Secondary Structure
MRRARRRAQAGLPGSCARRCGALVAGPRLARMRIALAQIRSGTDPAANLQLVGKYAGEAA
CCHHHHHHHCCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
TAGAQLVVFPEATMCRLGVPLRQVAEPVDGPWANGVRRIATEAGITVIAGMFTPTGDGRV
CCCCEEEEECCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCE
TNTLIAAGPGTPNQPDAHYHKIHLYDAFGFTESRTVAPGREPVVVVVDGVRVGLTVCYDI
EEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEC
RFPALYTELARRGAQLIAVCASWGSGPGKLEQWTLLARARALDSMSYVAAAGQADPGDAR
CCHHHHHHHHHCCHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TGVGASSAAPTGVGGSLVASPLGEVVVSAGTQPQLLVADIDVDNVAAARDRIAVLRNQTD
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC
FVQIDKAQSRG
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]