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The map label for this gene is psd

Identifier: 121636351

GI number: 121636351

Start: 556202

End: 556897

Strand: Reverse

Name: psd

Synonym: BCG_0476c

Alternate gene names: 121636351

Gene position: 556897-556202 (Counterclockwise)

Preceding gene: 121636352

Following gene: 121636350

Centisome position: 12.73

GC content: 71.12

Gene sequence:

>696_bases
GTGGCCAGACGCCCCCGCCCCGACGGCCCGCAACATCTGCTCGCCCTGGTGCGGTCCGCCGTTCCACCGGTTCATCCGGC
CGGGCGGCCGTTCATTGCCGCCGGCCTTGCGATTGCGGCCGTCGGACACCGCTACCGGTGGTTGCGCGGCACGGGTCTGC
TGGCGGCCGCTGCCTGCGCGGGCTTCTTCCGGCACCCGCAGCGGGTACCGCCCACCAGGCCGGCTGCCATTGTCGCGCCC
GCCGACGGCGTGATCTGCGCGATCGACTCAGCGGCCCCACCGGCCGAACTCAGCATGGGTGACACGCCGTTACCGCGAGT
CAGCATCTTCCTGTCGATATTGGACGCCCACGTGCAACGTGCCCCGGTGAGCGGGGAAGTGATCGCCGTGCAACACCGGC
CGGGCCGGTTCGGGTCGGCCGACCTACCGGAGGCGAGCGACGACAACGAGCGCACCAGTGTGCGGATCCGCATGCCCAAC
GGCGCCGAGGTGGTCGCGGTGCAGATCGCCGGGCTGGTGGCGCGCCGCATTGTGTGCGACGCACACGTCGGAGACAAGCT
GGCCATCGGTGACACCTACGGCCTGATCCGGTTCGGCTCCCGGCTGGATACCTACCTGCCAGCGGGCGCAGAGCCGATCG
TCAACGTCGGCCAGCGCGCGGTCGCCGGCGAGACCGTGCTGGCCGAATGTCGATGA

Upstream 100 bases:

>100_bases
GGCTGCCGGAACGCAGCTGCAAGTCTGGGACTTGACCTAACCGGACCGATCCTAGTGCCGTGCACCCAACCTGCGGCACG
AAGCTCCGTAAGATGACCCC

Downstream 100 bases:

>100_bases
TCGGAAAGCCCCGCGGCAGGCGAGGGGTAAACCTGCAGATACTGCCCAGCGCGATGACGGTGCTGTCCATTTGCGCGGGA
CTGACCGCAATCAAGTTTGC

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MARRPRPDGPQHLLALVRSAVPPVHPAGRPFIAAGLAIAAVGHRYRWLRGTGLLAAAACAGFFRHPQRVPPTRPAAIVAP
ADGVICAIDSAAPPAELSMGDTPLPRVSIFLSILDAHVQRAPVSGEVIAVQHRPGRFGSADLPEASDDNERTSVRIRMPN
GAEVVAVQIAGLVARRIVCDAHVGDKLAIGDTYGLIRFGSRLDTYLPAGAEPIVNVGQRAVAGETVLAECR

Sequences:

>Translated_231_residues
MARRPRPDGPQHLLALVRSAVPPVHPAGRPFIAAGLAIAAVGHRYRWLRGTGLLAAAACAGFFRHPQRVPPTRPAAIVAP
ADGVICAIDSAAPPAELSMGDTPLPRVSIFLSILDAHVQRAPVSGEVIAVQHRPGRFGSADLPEASDDNERTSVRIRMPN
GAEVVAVQIAGLVARRIVCDAHVGDKLAIGDTYGLIRFGSRLDTYLPAGAEPIVNVGQRAVAGETVLAECR
>Mature_230_residues
ARRPRPDGPQHLLALVRSAVPPVHPAGRPFIAAGLAIAAVGHRYRWLRGTGLLAAAACAGFFRHPQRVPPTRPAAIVAPA
DGVICAIDSAAPPAELSMGDTPLPRVSIFLSILDAHVQRAPVSGEVIAVQHRPGRFGSADLPEASDDNERTSVRIRMPNG
AEVVAVQIAGLVARRIVCDAHVGDKLAIGDTYGLIRFGSRLDTYLPAGAEPIVNVGQRAVAGETVLAECR

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_MYCBO (P67548)

Other databases:

- EMBL:   BX248335
- RefSeq:   NP_854108.1
- EnsemblBacteria:   EBMYCT00000016844
- GeneID:   1091463
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb0445c
- GeneTree:   EBGT00050000017584
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   PRK05305
- BioCyc:   MBOV233413:MB0445C-MONOMER
- BRENDA:   4.1.1.65
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 24260; Mature: 24129

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPRPDGPQHLLALVRSAVPPVHPAGRPFIAAGLAIAAVGHRYRWLRGTGLLAAAACA
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
GFFRHPQRVPPTRPAAIVAPADGVICAIDSAAPPAELSMGDTPLPRVSIFLSILDAHVQR
HHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
APVSGEVIAVQHRPGRFGSADLPEASDDNERTSVRIRMPNGAEVVAVQIAGLVARRIVCD
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHH
AHVGDKLAIGDTYGLIRFGSRLDTYLPAGAEPIVNVGQRAVAGETVLAECR
CCCCCEEEECCCHHHHHHCCHHHHHCCCCCCHHHHCCCHHHCCCEEEECCC
>Mature Secondary Structure 
ARRPRPDGPQHLLALVRSAVPPVHPAGRPFIAAGLAIAAVGHRYRWLRGTGLLAAAACA
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
GFFRHPQRVPPTRPAAIVAPADGVICAIDSAAPPAELSMGDTPLPRVSIFLSILDAHVQR
HHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
APVSGEVIAVQHRPGRFGSADLPEASDDNERTSVRIRMPNGAEVVAVQIAGLVARRIVCD
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHH
AHVGDKLAIGDTYGLIRFGSRLDTYLPAGAEPIVNVGQRAVAGETVLAECR
CCCCCEEEECCCHHHHHHCCHHHHHCCCCCCHHHHCCCHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972