Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is PE4 [H]
Identifier: 121636072
GI number: 121636072
Start: 218828
End: 220336
Strand: Reverse
Name: PE4 [H]
Synonym: BCG_0196c
Alternate gene names: 121636072
Gene position: 220336-218828 (Counterclockwise)
Preceding gene: 121636074
Following gene: 121636071
Centisome position: 5.04
GC content: 63.42
Gene sequence:
>1509_bases ATGTCGCACCTGGTCACAGCCCCTGACATGCTGGCGACGGCAGCTGCCCATGTGGATGAGATCGCTTCCACGCTGCGGGC CGCCAACGCGGCTGCGGCAGGCCCGACATGTAACCTGCTGGCCGCGGCCGGCGATGAGGTTTCGGCGGCAACGGCGGCCC TGTTCAGCGCATACGGGCGGGAGTATCAGGCGGTCGTCAAGCAGGCCGCGGCGTTCCACAGCGAGTTCACCCGGACGTTG GAGGCCGCCGGCAACGCCTACGCACACGCCGAAGCGGCCAATGCGGCCCGGGTATCGCACGCGCTGGACACTATCAACGC ACCGATCCGGACGCTGTTGGGCCGTACGCCGTTGAGCCCCAACGGATCCAGCGGGGCCGGCGGGCTGCCGGCGATCGCGC AGCTGGCTGCGGAGAGTCCGATAACGGCGTTGATTATGGGCGGCACCAATAACCCGCTACCCGACCCCGAGTACGTGACA GACATCAACAAGGCTTTCATCCAGACCCTCTTCCCGGGTGCTGTCTCGCAAGGCCTGTTCACGCCCGAGCAGTTCTGGCC GGTTACCCCCGACCTCGGCAATCTGACGTTCAACCAGTCCGTCACCGAAGGCGTGGCGCTGCTGAATACCACCGTCAACA ACCAACTGGCCCTCGACAACAAGGTCGTTGCGTTCGGCTACTCGCAGAGCGCCACGATCATCAACAACTACATCAATTCG CTGATGGCGATGGGTTCGCCGAATCCGGACGATATCTCCTTCGTCATGATTGGTAGTGGCAACAATCCCGTCGGCGGGCT GCTGGCGCGCTTCCCCGGCTTCTACATCCCGTTCCTGGACGTGCCGTTCAATGGCGCAACCCCGGCGAATAGTCCCTACC CGACACACATTTACACGGCCCAGTACGACGGCATCGCCCACGCGCCGCAATTCCCGCTGCGCATCCTGTCGGACATCAAC GCCTTCATGGGCTACTTCTACGTGCACAACACGTACCCGGAACTCATGGCCACCCAGGTGGATAACGCGGTGCCGTTGCC GACCTCCCCGGGCTATACCGGCAACACCCAGTACTACATGTTCCTGACTCAGGATCTGCCACTGCTCCAGCCGATCCGTG ACATCCCCTACGCCGGTCCCCCGATCGCCGACCTGTTCCAGCCGCAGCTGCGGGTGCTCGTCGACTTGGGCTACGCCGAC TACGGGCCGGGCGGCAATTACGCGGATATCCCCACTCCGGCCGGGCTGTTCTCGATCCCCAACCCGTTCGCTGTCACGTA TTACCTGATCAAAGGGAGCCTGCAGGCGCCCTATGGCGCCATCGTGGAGATTGGGGTGGAAGCCGGATTGATTGGGCCGG AGTGGTTCCCGGACAGCTATCCGTGGGTCCCGTCGATAAACCCGGGCCTGAATTTCTACTTCGGCCAGCCACAGGTGACA CTGCTATCCCTGATGAGTGGCGGTCTCGGCAACATCCTGCACCTGATCCCGCCACCGGTCTTCACCTGA
Upstream 100 bases:
>100_bases GGCAGGACCGCCTTACTCTCGTTAAGTACCTAATACCCGCGGTAGCGGGTCAGTCCCAAGTGACCGGTGCGGGCGCCGGT CCGTTGGGAAGGACGGGGAG
Downstream 100 bases:
>100_bases CGCGGCCGCGATAACGATTGGCCGAAAACGCCGGGCTTCCCGGCGGGCGCGCTCTAGGCTCTAAGGGCCCCAGCGTCGAA CAGGAGACCAGATGTCCTAC
Product: PE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTL EAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRTPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVT DINKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDIN AFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD YGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT LLSLMSGGLGNILHLIPPPVFT
Sequences:
>Translated_502_residues MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTL EAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRTPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVT DINKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDIN AFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD YGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT LLSLMSGGLGNILHLIPPPVFT >Mature_501_residues SHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTLE AAGNAYAHAEAANAARVSHALDTINAPIRTLLGRTPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTD INKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINSL MAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINA FMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADY GPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTL LSLMSGGLGNILHLIPPPVFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013228 - InterPro: IPR000030 [H]
Pfam domain/function: PF08237 PE-PPE; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 53116; Mature: 52984
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCH EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRTPLSP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF CCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCC TPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS CHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHH LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA HHHCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEE QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM ECCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEE FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP EEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT CCCEEEEEEEECCCCCCCCCEEEECHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHH LLSLMSGGLGNILHLIPPPVFT HHHHHCCCHHCCHHHCCCCCCC >Mature Secondary Structure SHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCH EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRTPLSP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF CCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCC TPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKVVAFGYSQSATIINNYINS CHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHH LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA HHHCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEE QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM ECCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEE FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP EEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT CCCEEEEEEEECCCCCCCCCEEEECHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHH LLSLMSGGLGNILHLIPPPVFT HHHHHCCCHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]