Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is PE3 [H]
Identifier: 121636071
GI number: 121636071
Start: 217330
End: 218736
Strand: Reverse
Name: PE3 [H]
Synonym: BCG_0195c
Alternate gene names: 121636071
Gene position: 218736-217330 (Counterclockwise)
Preceding gene: 121636072
Following gene: 121636066
Centisome position: 5.0
GC content: 62.62
Gene sequence:
>1407_bases ATGTCCTACGTCATCGCGGCCCCGGAGATGTTGGCAACGGCGGCCGCGGACGTGGACGGGATCGGTTCGGCGATACGAGC GGCCAGCGCGTCCGCTGCGGGTCCAACGACCGGACTGCTGGCCGCGGCCGCCGATGAGGTGTCGTCGGCCGCTGCAGCGC TGTTCAGCGAATACGCGCGCGAATGTCAAGAGGTCCTAAAGCAGGCTGCGGCGTTCCATGGCGAGTTCACCCGGGCGCTG GCTGCCGCCGGGGCCGCCTATGCCCAGGCTGAAGCCAGCAACACCGCTGCTATGTCGGGCACCGCCGGGTCCAGCGGCGC CCTCGGTTCTGTCGGGATGCTGTCAGGCAACCCGCTAACCGCGTTGATGATGGGCGGCACCGGGGAACCGATCCTTAGTG ACCGCGTCTTGGCGATCATTGACAGCGCATACATTCGGCCCATTTTCGGGCCCAACAACCCGGTCGCCCAGTACACGCCC GAGCAGTGGTGGCCGTTTATCGGGAACCTGTCACTGGACCAATCCATCGCCCAGGGTGTCACGCTGCTGAACAACGGCAT CAACGCGGAACTACAAAATGGGCATGACGTCGTCGTTTTCGGCTACTCGCAAAGCGCCGCGGTAGCGACCAATGAAATAC GCGCTCTTATGGCGTTACCACCGGGCCAAGCCCCAGATCCAAGCCGGCTGGCTTTCACGTTGATCGGTAATATCAATAAC CCCAACGGCGGCGTCCTCGAGCGTTACGTGGGCCTTTACCTCACGTTCTTGGATATGTCGTTCAACGGTGCGACTCCACC GGATTCCCCCTACCAGACCTACATGTACACCGGCCAATACGACGGCTACGCCCACAACCCGCAGTACCCGCTCAATATCT TGTCGGACCTCAACGCCTTCATGGGCATCAGATGGGTGCACAACGCGTACCCCTTCACCGCGGCCGAGGTTGCCAATGCC GTGCCGTTGCCCACGTCTCCGGGCTACACCGGCAACACCCATTACTACATGTTTCTGACCCAGGACCTGCCGCTGTTGCA GCCGATTCGCGCCATCCCCTTCGTAGGGACCCCAATAGCCGAGCTGATTCAGCCCGACCTACGGGTGCTAGTCGACTTGG GCTATGGCTACGGCTACGCCGACGTACCCACCCCGGCCAGCCTGTTCGCGCCAATCAACCCGATCGCCGTGGCCTCGGCC CTGGCGACCGGGACCGTGCAAGGCCCCCAAGCCGCCCTAGTAAGCATCGGATTGTTACCGCAGTCCGCGCTACCCAATAC GTATCCGTATCTTCCGTCGGCGAATCCGGGCCTGATGTTCAACTTCGGTCAATCCAGTGTGACGGAGTTGTCGGTGCTCA GTGGCGCCCTCGGGTCCGTAGCGAGATTGATTCCACCGATCGCGTGA
Upstream 100 bases:
>100_bases TTCACCTGACGCGGCCGCGATAACGATTGGCCGAAAACGCCGGGCTTCCCGGCGGGCGCGCTCTAGGCTCTAAGGGCCCC AGCGTCGAACAGGAGACCAG
Downstream 100 bases:
>100_bases GGTTCACGTTTCCTTCCGAGTTCCAAGCGGAGACTGGTTGCGGATCGATTCGTCGCGGATCAGCCCGCGCAGCAGTGCCG TGCTGAACTCCGCCGCGATC
Product: PE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYARECQEVLKQAAAFHGEFTRAL AAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTP EQWWPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN PNGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANA VPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASA LATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA
Sequences:
>Translated_468_residues MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYARECQEVLKQAAAFHGEFTRAL AAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTP EQWWPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN PNGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANA VPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASA LATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA >Mature_467_residues SYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYARECQEVLKQAAAFHGEFTRALA AAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPE QWWPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINNP NGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAV PLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASAL ATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013228 - InterPro: IPR000030 [H]
Pfam domain/function: PF08237 PE-PPE; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 48582; Mature: 48451
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR CCEEEECHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCEE ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV EEEECCCCCCHHHCHHHHHHHHHHCCEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN HHHCCCCCCEECCCCEEEEEECCCCCHHHHHHHEEEEECCCCCCCCCCCEEEEEEECCCC PNGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF CCCHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCHH ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP HHHCHHHHEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHEEECCC QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR CEEEECHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCEE ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIGNLSLDQSIAQGV EEEECCCCCCHHHCHHHHHHHHHHCCEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH TLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNINN HHHCCCCCCEECCCCEEEEEECCCCCHHHHHHHEEEEECCCCCCCCCCCEEEEEEECCCC PNGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAF CCCHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH MGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIA HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCHH ELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLP HHHCHHHHEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHEEECCC QSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]