Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612982
Identifier: 120612982
GI number: 120612982
Start: 4829161
End: 4829811
Strand: Reverse
Name: 120612982
Synonym: Aave_4346
Alternate gene names: NA
Gene position: 4829811-4829161 (Counterclockwise)
Preceding gene: 120612983
Following gene: 120612981
Centisome position: 90.23
GC content: 72.81
Gene sequence:
>651_bases ATGAAGCACATCGTCTTCTACCTGGACTTCGTTTCGCCATACGCGTGGCTGGCCTTCGAGCGCCTGCCGCAGGTGCTCGA GGGCCTGAGCCATTCGGTCGAGTACCGGCCCGTGCTGCTCGGCGCGCTGCTGCAGCAGCATGGCAACCCCGGGCCGGCCG GTATCGCGCCCAAGCGGTCCTGGACCTACCGCCATGCCGAATGGCTCGGCCATGCGCTGGGTACCGGGCTGGACATGCCG GCGCGGCATCCCTTCAATCCGCTGCCCCTGCTGCGCCAGTCGCTGGCCTGCAGCGAGGACGGGGCCGTCAACCGCTTCGT GGCCGGCACGGTGCTGCGCCACGTATGGCTCGGCGGCGCCGACGCGCTGGACCCCGGTCGGCTGGAGGACCTGGCAGCGG TGCTCGCGCCGCAGCGGCGCGCGGAAGCGCCGGGCGAGGAGCCGGGCGCGCGTGCCAAGGCGCTGCTGCGCGCGAACACC GACGCGGCCGCAGCGCAGGGCGTGTTCGGCGTGCCCGCCTTCGTGGTGGACGGCCAGCTCTTCTGGGGGCTGGACAGCCT GCCCATGCTGCGCGCCCGCCTGGAAGGCGACCCGTGGTTCGAGGGGCCGCGCTGGGACGCGGTGGCGGAGCTCCCTTCCG GGTTGAAGTAG
Upstream 100 bases:
>100_bases GCCCCGATGCGCGCCGCGCGGTCTGGTCGGCCCTGCTGCGCCGCGCGGGTCTGGCGGTTCCCGCGCCGCTTTCCGGTATC GCCATGGAAAGGACTTCGCC
Downstream 100 bases:
>100_bases CGCCTGCTTTCCCTGCATGCGGGTTTGTCCCGGGGAAGGGTTTTCCCCGGAGGTGCCGTGCTTGTCAGACTTCGGTCAGA TGGTGGTTCGATAGTGCGGC
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Dsba Oxidoreductase; Isomerase; 2-Hydroxychromene-2-Carboxylate Isomerase; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Thioredoxin Domain Protein; DSBA-Like Thioredoxin Domain Protein; Thioredoxin Oxidoreductase
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKHIVFYLDFVSPYAWLAFERLPQVLEGLSHSVEYRPVLLGALLQQHGNPGPAGIAPKRSWTYRHAEWLGHALGTGLDMP ARHPFNPLPLLRQSLACSEDGAVNRFVAGTVLRHVWLGGADALDPGRLEDLAAVLAPQRRAEAPGEEPGARAKALLRANT DAAAAQGVFGVPAFVVDGQLFWGLDSLPMLRARLEGDPWFEGPRWDAVAELPSGLK
Sequences:
>Translated_216_residues MKHIVFYLDFVSPYAWLAFERLPQVLEGLSHSVEYRPVLLGALLQQHGNPGPAGIAPKRSWTYRHAEWLGHALGTGLDMP ARHPFNPLPLLRQSLACSEDGAVNRFVAGTVLRHVWLGGADALDPGRLEDLAAVLAPQRRAEAPGEEPGARAKALLRANT DAAAAQGVFGVPAFVVDGQLFWGLDSLPMLRARLEGDPWFEGPRWDAVAELPSGLK >Mature_216_residues MKHIVFYLDFVSPYAWLAFERLPQVLEGLSHSVEYRPVLLGALLQQHGNPGPAGIAPKRSWTYRHAEWLGHALGTGLDMP ARHPFNPLPLLRQSLACSEDGAVNRFVAGTVLRHVWLGGADALDPGRLEDLAAVLAPQRRAEAPGEEPGARAKALLRANT DAAAAQGVFGVPAFVVDGQLFWGLDSLPMLRARLEGDPWFEGPRWDAVAELPSGLK
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23491; Mature: 23491
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIVFYLDFVSPYAWLAFERLPQVLEGLSHSVEYRPVLLGALLQQHGNPGPAGIAPKRS CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC WTYRHAEWLGHALGTGLDMPARHPFNPLPLLRQSLACSEDGAVNRFVAGTVLRHVWLGGA CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC DALDPGRLEDLAAVLAPQRRAEAPGEEPGARAKALLRANTDAAAAQGVFGVPAFVVDGQL CCCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCHHEECCCC FWGLDSLPMLRARLEGDPWFEGPRWDAVAELPSGLK EECCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCC >Mature Secondary Structure MKHIVFYLDFVSPYAWLAFERLPQVLEGLSHSVEYRPVLLGALLQQHGNPGPAGIAPKRS CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC WTYRHAEWLGHALGTGLDMPARHPFNPLPLLRQSLACSEDGAVNRFVAGTVLRHVWLGGA CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC DALDPGRLEDLAAVLAPQRRAEAPGEEPGARAKALLRANTDAAAAQGVFGVPAFVVDGQL CCCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCHHEECCCC FWGLDSLPMLRARLEGDPWFEGPRWDAVAELPSGLK EECCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA