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The map label for this gene is yngJ [H]

Identifier: 120612948

GI number: 120612948

Start: 4788799

End: 4789932

Strand: Reverse

Name: yngJ [H]

Synonym: Aave_4312

Alternate gene names: 120612948

Gene position: 4789932-4788799 (Counterclockwise)

Preceding gene: 120612949

Following gene: 120612947

Centisome position: 89.49

GC content: 72.75

Gene sequence:

>1134_bases
ATGAATTTTGTGCACACCGAAGACCGCCGCATGCTGGCGGACACGCTGGACCGCTTCATCGCCGGGCAGTCCGGCATCGA
GCAGCGCAACCATGCCGCCTACGGCGCGCAGGGCTACAGCCCCGGGCTGTACCGCGGCTTCGCCGACCTGGGCGCCATCG
GCGCGCTGTTCACCGAGGCCGACGGCGGCTTCGGCGGCGCGGGCTTCGACGTCGGCGTGGTGTTCGAGCGCCTGGGCCGT
GGCCTCGTCGCCGAACCTTTGCTCGGCGCCCTGGTGGTGGGCCGCGCCGTGGCGGCGGCCGGTACCGACGCGCAGAAGGA
AACCGTGCTGGCACCGCTGGTGGCCGGCGAGGCCGTGGCCGCGCTGGCGCACGACGAGCCGGGCGGCCACTACGAGCCGA
CGCGCGTGGCGGCCACCGCGCGCCGTGCGGGCGATGGCTGGGTGATCGACGGCGGCAAGGGCGTGGTGCTGTTCGGCGAC
AGCGCCGGCTGGCTGCTGGTGTCGGCCCGCACGGGCGGCGGCACCTTCGACGCGGAGGGCATCTCCCTGTTCCTGGTGCC
CGGCGATGCCGCCGGTCTCACGCGCAAGGCCAATGGCCGCATCGACGGCGGCCGCACGGCCGAACTGGTCTTCACGAACG
TGGCCGTGGGCGCCGAGGCGCTGCTGGGCGCGGAGGGCGAGGGCGCCACGGTGCTGGAGCGCGCCGTGGGCTGGGGCGTG
CTGGCGCTCTGCGCCGAGGCCGTGGGCGCGATGGACGTGGCCAAGGAGCACACGCTGGAATACCTGCGCACCCGCAGGCA
GTTCGGCGTGCCGATCGGCAGCTTCCAGGCGCTGCAGCACCGCATGGCGGACCTGCTGCTGGAGGTGGAGCAGGCCCGTT
CGGCCGTCATCAACGCCGCGGCCGCGATCGATGGCGCGGACCGCACCGCGCGCGAGCGGGCGCTCTCGGCCGCCAAGTTC
AGCATCGGCCGCATCGGCACGCTCGTGGCCGAGGAAAGCATCCAGATGCATGGGGGTATCGGCATGACCTGGGAACTGCC
GCTGGCGCACTATGCGAAGCGGCTGGTGATGATCGACCACCAGCTGGGCGATGAAGACCACCACCTGGCGCGCTACATCG
CTCTCGGGCACTGA

Upstream 100 bases:

>100_bases
CAGCCGCGGCCAACTACTTCAACTACCGCAAGCTGTCGATCTTCGGCGGCTCCAACGAGATCCAGAAAAACATCATCTCC
AAGATGATCCTGGGGTTGTG

Downstream 100 bases:

>100_bases
GTGGACACCCCCCTGAAGCGCTGCGCGCTTTCCCCCCGCTCTCGCCTTGCTTACCGCAAGGCGGGCAGGGGGACGCAGCC
CTCGCTGCGGGGCGGCCCTT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNFVHTEDRRMLADTLDRFIAGQSGIEQRNHAAYGAQGYSPGLYRGFADLGAIGALFTEADGGFGGAGFDVGVVFERLGR
GLVAEPLLGALVVGRAVAAAGTDAQKETVLAPLVAGEAVAALAHDEPGGHYEPTRVAATARRAGDGWVIDGGKGVVLFGD
SAGWLLVSARTGGGTFDAEGISLFLVPGDAAGLTRKANGRIDGGRTAELVFTNVAVGAEALLGAEGEGATVLERAVGWGV
LALCAEAVGAMDVAKEHTLEYLRTRRQFGVPIGSFQALQHRMADLLLEVEQARSAVINAAAAIDGADRTARERALSAAKF
SIGRIGTLVAEESIQMHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYIALGH

Sequences:

>Translated_377_residues
MNFVHTEDRRMLADTLDRFIAGQSGIEQRNHAAYGAQGYSPGLYRGFADLGAIGALFTEADGGFGGAGFDVGVVFERLGR
GLVAEPLLGALVVGRAVAAAGTDAQKETVLAPLVAGEAVAALAHDEPGGHYEPTRVAATARRAGDGWVIDGGKGVVLFGD
SAGWLLVSARTGGGTFDAEGISLFLVPGDAAGLTRKANGRIDGGRTAELVFTNVAVGAEALLGAEGEGATVLERAVGWGV
LALCAEAVGAMDVAKEHTLEYLRTRRQFGVPIGSFQALQHRMADLLLEVEQARSAVINAAAAIDGADRTARERALSAAKF
SIGRIGTLVAEESIQMHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYIALGH
>Mature_377_residues
MNFVHTEDRRMLADTLDRFIAGQSGIEQRNHAAYGAQGYSPGLYRGFADLGAIGALFTEADGGFGGAGFDVGVVFERLGR
GLVAEPLLGALVVGRAVAAAGTDAQKETVLAPLVAGEAVAALAHDEPGGHYEPTRVAATARRAGDGWVIDGGKGVVLFGD
SAGWLLVSARTGGGTFDAEGISLFLVPGDAAGLTRKANGRIDGGRTAELVFTNVAVGAEALLGAEGEGATVLERAVGWGV
LALCAEAVGAMDVAKEHTLEYLRTRRQFGVPIGSFQALQHRMADLLLEVEQARSAVINAAAAIDGADRTARERALSAAKF
SIGRIGTLVAEESIQMHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYIALGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=366, Percent_Identity=29.2349726775956, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4557233, Length=314, Percent_Identity=28.6624203821656, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI226958414, Length=320, Percent_Identity=30.3125, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4501857, Length=305, Percent_Identity=27.5409836065574, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI7656849, Length=318, Percent_Identity=26.7295597484277, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI4501859, Length=302, Percent_Identity=27.1523178807947, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI187960098, Length=325, Percent_Identity=27.0769230769231, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4557231, Length=325, Percent_Identity=27.0769230769231, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI21361497, Length=349, Percent_Identity=26.3610315186246, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4557235, Length=320, Percent_Identity=28.4375, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI76496475, Length=320, Percent_Identity=28.4375, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI48976061, Length=259, Percent_Identity=25.4826254826255, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI211971008, Length=259, Percent_Identity=25.4826254826255, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI38505218, Length=323, Percent_Identity=22.9102167182663, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87081958, Length=248, Percent_Identity=25.4032258064516, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786223, Length=341, Percent_Identity=23.1671554252199, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17506239, Length=357, Percent_Identity=28.0112044817927, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=312, Percent_Identity=28.2051282051282, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=306, Percent_Identity=28.1045751633987, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=313, Percent_Identity=26.8370607028754, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=356, Percent_Identity=26.123595505618, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=332, Percent_Identity=30.421686746988, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=270, Percent_Identity=29.6296296296296, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17505929, Length=331, Percent_Identity=28.0966767371601, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=334, Percent_Identity=28.4431137724551, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=328, Percent_Identity=23.4756097560976, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=324, Percent_Identity=27.1604938271605, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=310, Percent_Identity=26.7741935483871, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562446, Length=310, Percent_Identity=24.8387096774194, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=27.2340425531915, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17534353, Length=381, Percent_Identity=24.4094488188976, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355753, Length=313, Percent_Identity=32.2683706070287, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24646207, Length=357, Percent_Identity=28.0112044817927, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21356377, Length=352, Percent_Identity=26.9886363636364, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24666513, Length=362, Percent_Identity=27.3480662983425, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24660351, Length=257, Percent_Identity=30.3501945525292, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281363737, Length=253, Percent_Identity=26.8774703557312, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 39284; Mature: 39284

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFVHTEDRRMLADTLDRFIAGQSGIEQRNHAAYGAQGYSPGLYRGFADLGAIGALFTEA
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
DGGFGGAGFDVGVVFERLGRGLVAEPLLGALVVGRAVAAAGTDAQKETVLAPLVAGEAVA
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHH
ALAHDEPGGHYEPTRVAATARRAGDGWVIDGGKGVVLFGDSAGWLLVSARTGGGTFDAEG
HHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCC
ISLFLVPGDAAGLTRKANGRIDGGRTAELVFTNVAVGAEALLGAEGEGATVLERAVGWGV
EEEEEECCCCCCCEECCCCCCCCCCEEEEEEEEHHHCHHHHHCCCCCCHHHHHHHHHHHH
LALCAEAVGAMDVAKEHTLEYLRTRRQFGVPIGSFQALQHRMADLLLEVEQARSAVINAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIDGADRTARERALSAAKFSIGRIGTLVAEESIQMHGGIGMTWELPLAHYAKRLVMIDH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHEEEEC
QLGDEDHHLARYIALGH
CCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MNFVHTEDRRMLADTLDRFIAGQSGIEQRNHAAYGAQGYSPGLYRGFADLGAIGALFTEA
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
DGGFGGAGFDVGVVFERLGRGLVAEPLLGALVVGRAVAAAGTDAQKETVLAPLVAGEAVA
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHH
ALAHDEPGGHYEPTRVAATARRAGDGWVIDGGKGVVLFGDSAGWLLVSARTGGGTFDAEG
HHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCC
ISLFLVPGDAAGLTRKANGRIDGGRTAELVFTNVAVGAEALLGAEGEGATVLERAVGWGV
EEEEEECCCCCCCEECCCCCCCCCCEEEEEEEEHHHCHHHHHCCCCCCHHHHHHHHHHHH
LALCAEAVGAMDVAKEHTLEYLRTRRQFGVPIGSFQALQHRMADLLLEVEQARSAVINAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIDGADRTARERALSAAKFSIGRIGTLVAEESIQMHGGIGMTWELPLAHYAKRLVMIDH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHEEEEC
QLGDEDHHLARYIALGH
CCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]