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The map label for this gene is yngJ [H]

Identifier: 120612949

GI number: 120612949

Start: 4789932

End: 4791140

Strand: Reverse

Name: yngJ [H]

Synonym: Aave_4313

Alternate gene names: 120612949

Gene position: 4791140-4789932 (Counterclockwise)

Preceding gene: 120612950

Following gene: 120612948

Centisome position: 89.51

GC content: 66.25

Gene sequence:

>1209_bases
ATGGATCTGCAATTCACCCCCCAGGAGGAAGCCTTCCGCGACGAAGTGCAGGCCTTCCTGAAAGAGCACCTGCCCGCCGA
GCTGTCGCACAAGGTGCGCGCCGGCCTGCGCCTGGACAAGGCCGACATGGAACGCTGGCACGCCATCCTGAACGCGCGCG
GCTGGCTCGCGAACCACTGGCCCGAGCAGTACGGCGGGCCGGGGTGGAACGCCGTGCAGAAGTTCATCTTCGAGAACGAA
TGCGCGCTGGCCGGCGCGCCGCGCATCGTGCCCTTCGGCGTGAACATGCTGGGCCCCGTGCTGATCAAGTACGGCAACGA
AGCGCAGAAGCAATACTGGCTGCCGCGCATCCTGAACGGCGAGGACTGGTGGTGCCAGGGCTATTCGGAGCCCGGCGCGG
GCTCGGACCTGGCCTCGGTCAAGACCACGGCGGTGCTGAAGCGGGATGCCAGTGGCGACCACTACGTCGTCAACGGCCAG
AAGACCTGGACCACGCTGGGCCAGCACGCCAACATGATCTTCTGCCTGGTGCGCACCGACCGCGAAGCCAAGGCGCAGTC
GGGCATCAGCTTCCTGCTGGTGGACATGCGCTCGCCCGGCGTCGAGGTGCGCCCGATCATCACGCTGGACGGCGAGCACG
AAGTGAACGAGGTGTTCTTCACCGACGTGAAGGTACCGGCCGAGAACCTGGTGGGCGAGGAGAACAAGGGCTGGACCTAT
GCCAAGTACCTGCTGACCTACGAGCGCACCAACATCGCGGGCGTGGGCTTCTCGGTGGCCGCGCTGGAAAAGCTCAAGCG
CGTGGCCGCCACCGTGCAGTGCAACGGGCGCCCGCTCGCGCAGGACCCGCTCTTCGCGGCGCGCCTCGCCCGCGTGGAGA
TCGACCTGGAGAACATGAAGACCACCAATCTGCGCGTGATCGCCGCGGTGGCCGGCGGCGGCGTGCCGGGCGCGGAAAGC
TCTATGCTGAAGATCCGCGGCACCGAGATCCGCCAGGAGATCCTCTCGCTCACGCGGCGCGCCATGGGACCGTATGCACT
GCCTTTCGAGGAAGAGGCGCTGCATGCAGGCCACGAAGACCTGGCCGTGGGGCCGGAGGGCGCTGCCGCAGCCGCGGCCA
ACTACTTCAACTACCGCAAGCTGTCGATCTTCGGCGGCTCCAACGAGATCCAGAAAAACATCATCTCCAAGATGATCCTG
GGGTTGTGA

Upstream 100 bases:

>100_bases
AAAAGCTGGTGGCCGAGGGCCGCGACTTCGGCAGCCTGAACCGCGCCGCCGCCGAAGCGCACTGACCGGACGACAGAACG
AGCGATCGACGAAAGACCCC

Downstream 100 bases:

>100_bases
TGAATTTTGTGCACACCGAAGACCGCCGCATGCTGGCGGACACGCTGGACCGCTTCATCGCCGGGCAGTCCGGCATCGAG
CAGCGCAACCATGCCGCCTA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDLQFTPQEEAFRDEVQAFLKEHLPAELSHKVRAGLRLDKADMERWHAILNARGWLANHWPEQYGGPGWNAVQKFIFENE
CALAGAPRIVPFGVNMLGPVLIKYGNEAQKQYWLPRILNGEDWWCQGYSEPGAGSDLASVKTTAVLKRDASGDHYVVNGQ
KTWTTLGQHANMIFCLVRTDREAKAQSGISFLLVDMRSPGVEVRPIITLDGEHEVNEVFFTDVKVPAENLVGEENKGWTY
AKYLLTYERTNIAGVGFSVAALEKLKRVAATVQCNGRPLAQDPLFAARLARVEIDLENMKTTNLRVIAAVAGGGVPGAES
SMLKIRGTEIRQEILSLTRRAMGPYALPFEEEALHAGHEDLAVGPEGAAAAAANYFNYRKLSIFGGSNEIQKNIISKMIL
GL

Sequences:

>Translated_402_residues
MDLQFTPQEEAFRDEVQAFLKEHLPAELSHKVRAGLRLDKADMERWHAILNARGWLANHWPEQYGGPGWNAVQKFIFENE
CALAGAPRIVPFGVNMLGPVLIKYGNEAQKQYWLPRILNGEDWWCQGYSEPGAGSDLASVKTTAVLKRDASGDHYVVNGQ
KTWTTLGQHANMIFCLVRTDREAKAQSGISFLLVDMRSPGVEVRPIITLDGEHEVNEVFFTDVKVPAENLVGEENKGWTY
AKYLLTYERTNIAGVGFSVAALEKLKRVAATVQCNGRPLAQDPLFAARLARVEIDLENMKTTNLRVIAAVAGGGVPGAES
SMLKIRGTEIRQEILSLTRRAMGPYALPFEEEALHAGHEDLAVGPEGAAAAAANYFNYRKLSIFGGSNEIQKNIISKMIL
GL
>Mature_402_residues
MDLQFTPQEEAFRDEVQAFLKEHLPAELSHKVRAGLRLDKADMERWHAILNARGWLANHWPEQYGGPGWNAVQKFIFENE
CALAGAPRIVPFGVNMLGPVLIKYGNEAQKQYWLPRILNGEDWWCQGYSEPGAGSDLASVKTTAVLKRDASGDHYVVNGQ
KTWTTLGQHANMIFCLVRTDREAKAQSGISFLLVDMRSPGVEVRPIITLDGEHEVNEVFFTDVKVPAENLVGEENKGWTY
AKYLLTYERTNIAGVGFSVAALEKLKRVAATVQCNGRPLAQDPLFAARLARVEIDLENMKTTNLRVIAAVAGGGVPGAES
SMLKIRGTEIRQEILSLTRRAMGPYALPFEEEALHAGHEDLAVGPEGAAAAAANYFNYRKLSIFGGSNEIQKNIISKMIL
GL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=266, Percent_Identity=31.203007518797, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI226958414, Length=216, Percent_Identity=34.7222222222222, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI4557233, Length=356, Percent_Identity=28.6516853932584, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI4501857, Length=404, Percent_Identity=25.4950495049505, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI4557231, Length=325, Percent_Identity=27.0769230769231, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI187960098, Length=325, Percent_Identity=27.0769230769231, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI48976061, Length=357, Percent_Identity=25.2100840336134, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI211971008, Length=357, Percent_Identity=25.2100840336134, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4501859, Length=403, Percent_Identity=25.8064516129032, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI21361497, Length=233, Percent_Identity=27.4678111587983, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI76496475, Length=159, Percent_Identity=31.4465408805031, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4557235, Length=159, Percent_Identity=31.4465408805031, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI7656849, Length=325, Percent_Identity=27.0769230769231, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI38505218, Length=239, Percent_Identity=28.8702928870293, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87081958, Length=311, Percent_Identity=25.4019292604502, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1786223, Length=403, Percent_Identity=22.8287841191067, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17534899, Length=333, Percent_Identity=28.2282282282282, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=274, Percent_Identity=30.6569343065693, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=271, Percent_Identity=28.7822878228782, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=310, Percent_Identity=29.3548387096774, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=203, Percent_Identity=33.9901477832512, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=210, Percent_Identity=31.9047619047619, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=205, Percent_Identity=32.1951219512195, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=214, Percent_Identity=29.4392523364486, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=216, Percent_Identity=28.7037037037037, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71985184, Length=204, Percent_Identity=31.3725490196078, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=204, Percent_Identity=31.3725490196078, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=308, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=223, Percent_Identity=28.2511210762332, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17533517, Length=253, Percent_Identity=28.0632411067194, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21356377, Length=359, Percent_Identity=28.4122562674095, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21355753, Length=229, Percent_Identity=31.4410480349345, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24660351, Length=281, Percent_Identity=29.1814946619217, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24646207, Length=400, Percent_Identity=27.25, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281363737, Length=230, Percent_Identity=28.695652173913, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24666513, Length=205, Percent_Identity=31.219512195122, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI19920834, Length=302, Percent_Identity=26.4900662251656, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44420; Mature: 44420

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQFTPQEEAFRDEVQAFLKEHLPAELSHKVRAGLRLDKADMERWHAILNARGWLANHW
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCC
PEQYGGPGWNAVQKFIFENECALAGAPRIVPFGVNMLGPVLIKYGNEAQKQYWLPRILNG
CHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHEECCCHHHHHHCCCEECCC
EDWWCQGYSEPGAGSDLASVKTTAVLKRDASGDHYVVNGQKTWTTLGQHANMIFCLVRTD
CCCEEECCCCCCCCCCHHHHHHHHHEEECCCCCEEEECCCHHHHHHCCCCCEEEEEEECC
REAKAQSGISFLLVDMRSPGVEVRPIITLDGEHEVNEVFFTDVKVPAENLVGEENKGWTY
CHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCEE
AKYLLTYERTNIAGVGFSVAALEKLKRVAATVQCNGRPLAQDPLFAARLARVEIDLENMK
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHEEEEHHHCC
TTNLRVIAAVAGGGVPGAESSMLKIRGTEIRQEILSLTRRAMGPYALPFEEEALHAGHED
CCCEEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC
LAVGPEGAAAAAANYFNYRKLSIFGGSNEIQKNIISKMILGL
CCCCCCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLQFTPQEEAFRDEVQAFLKEHLPAELSHKVRAGLRLDKADMERWHAILNARGWLANHW
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCC
PEQYGGPGWNAVQKFIFENECALAGAPRIVPFGVNMLGPVLIKYGNEAQKQYWLPRILNG
CHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHEECCCHHHHHHCCCEECCC
EDWWCQGYSEPGAGSDLASVKTTAVLKRDASGDHYVVNGQKTWTTLGQHANMIFCLVRTD
CCCEEECCCCCCCCCCHHHHHHHHHEEECCCCCEEEECCCHHHHHHCCCCCEEEEEEECC
REAKAQSGISFLLVDMRSPGVEVRPIITLDGEHEVNEVFFTDVKVPAENLVGEENKGWTY
CHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCEE
AKYLLTYERTNIAGVGFSVAALEKLKRVAATVQCNGRPLAQDPLFAARLARVEIDLENMK
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHEEEEHHHCC
TTNLRVIAAVAGGGVPGAESSMLKIRGTEIRQEILSLTRRAMGPYALPFEEEALHAGHED
CCCEEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC
LAVGPEGAAAAAANYFNYRKLSIFGGSNEIQKNIISKMILGL
CCCCCCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]