| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612922
Identifier: 120612922
GI number: 120612922
Start: 4756992
End: 4757348
Strand: Direct
Name: 120612922
Synonym: Aave_4286
Alternate gene names: NA
Gene position: 4756992-4757348 (Clockwise)
Preceding gene: 120612921
Following gene: 120612923
Centisome position: 88.87
GC content: 50.7
Gene sequence:
>357_bases ATGAATTCTCCTGAGGCGCAATCTGTGGCGGTCATCTTTGAGATGGATGCGCGAGAGCAAATCATGAAACTGGCGGGATC CATGCCTGTGTGGGCTATTGAAAGCACGACAAATGCGAAGGCAATTGACGATGCACGGCAGCAGTACCATTCCCCGCTGA CCATTTTTTTTGCACATCCTGGCGAATCGAGAATGGATATGTTTTCCCGGGTTTTGTTCGACGTTGACGAACATCACCAA TGCGGCACGTTTGATGTGTACGGTGCGTCCGAGAGGGATATCGACCCAGCAGCTGTGACTGAACTGAATATCCATCGTGT GCGCGAGACTGACTACGGATTCCAATTAATCCGGTGA
Upstream 100 bases:
>100_bases TGGAATTTTAGAACCTCCCTTGTGCTTTGTCAAAAGGTGTTCTCAAGAGGCCCTGACCTATCTCGTCATAGCCTCATGGC AGAACTTCGGGACAAAATCC
Downstream 100 bases:
>100_bases GGCAGATGATGCAATTGAAACAGCCCTTGCTGCTGCCCAGAGTATCTTCCACCGCCAATGGCGCGCTCTCATGAAGCCCG TGTAGCGGTCTCGCGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNSPEAQSVAVIFEMDAREQIMKLAGSMPVWAIESTTNAKAIDDARQQYHSPLTIFFAHPGESRMDMFSRVLFDVDEHHQ CGTFDVYGASERDIDPAAVTELNIHRVRETDYGFQLIR
Sequences:
>Translated_118_residues MNSPEAQSVAVIFEMDAREQIMKLAGSMPVWAIESTTNAKAIDDARQQYHSPLTIFFAHPGESRMDMFSRVLFDVDEHHQ CGTFDVYGASERDIDPAAVTELNIHRVRETDYGFQLIR >Mature_118_residues MNSPEAQSVAVIFEMDAREQIMKLAGSMPVWAIESTTNAKAIDDARQQYHSPLTIFFAHPGESRMDMFSRVLFDVDEHHQ CGTFDVYGASERDIDPAAVTELNIHRVRETDYGFQLIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13421; Mature: 13421
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPEAQSVAVIFEMDAREQIMKLAGSMPVWAIESTTNAKAIDDARQQYHSPLTIFFAHP CCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECC GESRMDMFSRVLFDVDEHHQCGTFDVYGASERDIDPAAVTELNIHRVRETDYGFQLIR CCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHEEHHEEEECCCCCEEECC >Mature Secondary Structure MNSPEAQSVAVIFEMDAREQIMKLAGSMPVWAIESTTNAKAIDDARQQYHSPLTIFFAHP CCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECC GESRMDMFSRVLFDVDEHHQCGTFDVYGASERDIDPAAVTELNIHRVRETDYGFQLIR CCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHEEHHEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA