| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612923
Identifier: 120612923
GI number: 120612923
Start: 4757696
End: 4758310
Strand: Direct
Name: 120612923
Synonym: Aave_4287
Alternate gene names: NA
Gene position: 4757696-4758310 (Clockwise)
Preceding gene: 120612922
Following gene: 120612924
Centisome position: 88.88
GC content: 40.0
Gene sequence:
>615_bases ATGCACGGGACACCAATGGTAGAGAATAATCCAGTCAACCTTCAAATCCTAAAGGAAAGAAAGAAGGCTGCTTCTTTAGC ACCATCTCTAGCAAAGCGCTATGAAAGCATGCTGCTAGCGGCCTTCCCTGAAAGTTACCCAGAAGGTGAATTATTTATAA AAAACACTTTTACAGGAGATGACAGGGAAGATTATCTAAGGTTTTTCTCGTTATTTAACGGAAAGAAGTGGACCGAAGTA GATATCGAAAAAATTGAAGATATTTACATACAACACTCCAGATTGACAACCAGCGGTAGCATCTACTATTTACCTGTATT TCTCAAATATTTCTTCGACCTCAAGAATATAGACAACGAATTCTTTATTTATCTGATGTTTGATTTGGAGAATGGATTCG ATGAGCATACGCCAGAAAACCTGGACGACTCCTTGAAAGGAAAGAAAAAGCTGGAAAGAAAATATCTTTCCTTTGAAAAG ATCAATCCTATACAGTCTAAACTGGTGGCCACATTTTTAGTCAATGCAGCAAACCTTCTCCCGGAGGAAAGCTACGAGGG CAAGCAAGCTCAACGCGCACTCACCAACTACTGGGGGAATTTCCTGCTTTTCTGA
Upstream 100 bases:
>100_bases GATGCATTGACGCAAGAATCAACATTGCAAAAAAATGCTTTGCAGGTGGCGATGCTGGTCACAACAAGCAAATTAATGAG CTCAGGAGAATCATCGGAAA
Downstream 100 bases:
>100_bases TCTGCCATGTCGTTCACTGTAGATCTATATCTATGTATAGCGGGATTTTGATCTGAAAAACCGCCAGCGCTTACAAATTT TCAAAATACTGCAGCATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MHGTPMVENNPVNLQILKERKKAASLAPSLAKRYESMLLAAFPESYPEGELFIKNTFTGDDREDYLRFFSLFNGKKWTEV DIEKIEDIYIQHSRLTTSGSIYYLPVFLKYFFDLKNIDNEFFIYLMFDLENGFDEHTPENLDDSLKGKKKLERKYLSFEK INPIQSKLVATFLVNAANLLPEESYEGKQAQRALTNYWGNFLLF
Sequences:
>Translated_204_residues MHGTPMVENNPVNLQILKERKKAASLAPSLAKRYESMLLAAFPESYPEGELFIKNTFTGDDREDYLRFFSLFNGKKWTEV DIEKIEDIYIQHSRLTTSGSIYYLPVFLKYFFDLKNIDNEFFIYLMFDLENGFDEHTPENLDDSLKGKKKLERKYLSFEK INPIQSKLVATFLVNAANLLPEESYEGKQAQRALTNYWGNFLLF >Mature_204_residues MHGTPMVENNPVNLQILKERKKAASLAPSLAKRYESMLLAAFPESYPEGELFIKNTFTGDDREDYLRFFSLFNGKKWTEV DIEKIEDIYIQHSRLTTSGSIYYLPVFLKYFFDLKNIDNEFFIYLMFDLENGFDEHTPENLDDSLKGKKKLERKYLSFEK INPIQSKLVATFLVNAANLLPEESYEGKQAQRALTNYWGNFLLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23887; Mature: 23887
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGTPMVENNPVNLQILKERKKAASLAPSLAKRYESMLLAAFPESYPEGELFIKNTFTGD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC DREDYLRFFSLFNGKKWTEVDIEKIEDIYIQHSRLTTSGSIYYLPVFLKYFFDLKNIDNE CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEECCCCCEEHHHHHHHHHHHHHCCCCE FFIYLMFDLENGFDEHTPENLDDSLKGKKKLERKYLSFEKINPIQSKLVATFLVNAANLL EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC PEESYEGKQAQRALTNYWGNFLLF CCCCCCHHHHHHHHHHHHHCEECC >Mature Secondary Structure MHGTPMVENNPVNLQILKERKKAASLAPSLAKRYESMLLAAFPESYPEGELFIKNTFTGD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC DREDYLRFFSLFNGKKWTEVDIEKIEDIYIQHSRLTTSGSIYYLPVFLKYFFDLKNIDNE CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEECCCCCEEHHHHHHHHHHHHHCCCCE FFIYLMFDLENGFDEHTPENLDDSLKGKKKLERKYLSFEKINPIQSKLVATFLVNAANLL EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC PEESYEGKQAQRALTNYWGNFLLF CCCCCCHHHHHHHHHHHHHCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA