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The map label for this gene is 120612872

Identifier: 120612872

GI number: 120612872

Start: 4692497

End: 4693108

Strand: Reverse

Name: 120612872

Synonym: Aave_4236

Alternate gene names: NA

Gene position: 4693108-4692497 (Counterclockwise)

Preceding gene: 120612873

Following gene: 120612871

Centisome position: 87.68

GC content: 67.65

Gene sequence:

>612_bases
ATGGATGAAGCGTATATCGGCACCATCGTGCTGTGGGCCGGCAGCTGGGTACCGAGGAACTGGGCGCTGTGCGACGGGAC
GCAGCTGAATATCATGGACTACCAGGCGCTGTACTCCCTCATCGGCGTGCGCTACGGTGGCGATGCGCGCACCACGTTCA
ACCTCCCCGACCTGCGCAACCGGGTGCCGATGGGGCTGCAGGCGGCGTCGCAGATGCCCGGCGCCACGGGCGCGGCGTCG
CAGGTCCTGACCGTGACCGGCTCCGCCACCGGCGTGATCGCCGCCAACCAGTTGCCGCCGATGAGCGGCAAGGCGTCGGT
GTCCATTCCCGCGAACAACGCGCCGGTCGCGGCGAATCTCACCGACGTCCCGGGCCCCAATGCCGTGCTGGCCAAGGGTG
TGGCGAGCAACTTCAGCGCGAAGATCTACACGAGCGACGCTGCCAACACCAACCTCAAGCCCTTCGACGCGCCGGTCACC
ATCAGCCAGGGTTCCCCGCAGCAGCCCCTGTCGCTGCCGGTGTCGCTGTCGGGCCAGGTAAGCACCCTCCAGCCCTCGCT
GACGCTGAACTTCATCATCTGCCTGCTGGGGCTGTATCCCGACCGGCCCTGA

Upstream 100 bases:

>100_bases
CGTTCACCCGCCCCCTTCACGGGGGGCAGCGGAGCGGTGCGTCCCGCGCCATGCGCACGGGACCACTCAAATCAATGTCC
AACCGAAAGTGAGGGAAACC

Downstream 100 bases:

>100_bases
CGGGCCGGCTGTGTCCCATGGGCTCCGCATTGCCGCCAGCGGCAGGACTGCGCCGCGGGCTGCGGAGCGTTCCAGACATC
TTGAGGAAAGAGGGAAATCA

Product: phage tail collar domain-containing protein

Products: NA

Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Microcystin Dependent Protein MdpB; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent; Phenylacrylic Acid Decarboxylase

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MDEAYIGTIVLWAGSWVPRNWALCDGTQLNIMDYQALYSLIGVRYGGDARTTFNLPDLRNRVPMGLQAASQMPGATGAAS
QVLTVTGSATGVIAANQLPPMSGKASVSIPANNAPVAANLTDVPGPNAVLAKGVASNFSAKIYTSDAANTNLKPFDAPVT
ISQGSPQQPLSLPVSLSGQVSTLQPSLTLNFIICLLGLYPDRP

Sequences:

>Translated_203_residues
MDEAYIGTIVLWAGSWVPRNWALCDGTQLNIMDYQALYSLIGVRYGGDARTTFNLPDLRNRVPMGLQAASQMPGATGAAS
QVLTVTGSATGVIAANQLPPMSGKASVSIPANNAPVAANLTDVPGPNAVLAKGVASNFSAKIYTSDAANTNLKPFDAPVT
ISQGSPQQPLSLPVSLSGQVSTLQPSLTLNFIICLLGLYPDRP
>Mature_203_residues
MDEAYIGTIVLWAGSWVPRNWALCDGTQLNIMDYQALYSLIGVRYGGDARTTFNLPDLRNRVPMGLQAASQMPGATGAAS
QVLTVTGSATGVIAANQLPPMSGKASVSIPANNAPVAANLTDVPGPNAVLAKGVASNFSAKIYTSDAANTNLKPFDAPVT
ISQGSPQQPLSLPVSLSGQVSTLQPSLTLNFIICLLGLYPDRP

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21100; Mature: 21100

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEAYIGTIVLWAGSWVPRNWALCDGTQLNIMDYQALYSLIGVRYGGDARTTFNLPDLRN
CCCCEEEEEEEEECCCCCCCEEEECCCEEEEEHHHHHHHHHCEEECCCCCEEECCCHHHH
RVPMGLQAASQMPGATGAASQVLTVTGSATGVIAANQLPPMSGKASVSIPANNAPVAANL
CCCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEC
TDVPGPNAVLAKGVASNFSAKIYTSDAANTNLKPFDAPVTISQGSPQQPLSLPVSLSGQV
CCCCCCCCEEHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCE
STLQPSLTLNFIICLLGLYPDRP
EEECCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDEAYIGTIVLWAGSWVPRNWALCDGTQLNIMDYQALYSLIGVRYGGDARTTFNLPDLRN
CCCCEEEEEEEEECCCCCCCEEEECCCEEEEEHHHHHHHHHCEEECCCCCEEECCCHHHH
RVPMGLQAASQMPGATGAASQVLTVTGSATGVIAANQLPPMSGKASVSIPANNAPVAANL
CCCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEC
TDVPGPNAVLAKGVASNFSAKIYTSDAANTNLKPFDAPVTISQGSPQQPLSLPVSLSGQV
CCCCCCCCEEHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCE
STLQPSLTLNFIICLLGLYPDRP
EEECCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA