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The map label for this gene is 120612871

Identifier: 120612871

GI number: 120612871

Start: 4691783

End: 4692397

Strand: Reverse

Name: 120612871

Synonym: Aave_4235

Alternate gene names: NA

Gene position: 4692397-4691783 (Counterclockwise)

Preceding gene: 120612872

Following gene: 120612866

Centisome position: 87.66

GC content: 69.43

Gene sequence:

>615_bases
ATGGATGAGAGTTACATCGGCACCGTGCTGCTGTGGACCGCGGCCTTCGTGCCGCGCGGCTGGGCACTGTGCGACGGGTC
GGTCCTGAACATCACGCAGAACCCGGCGCTGTTCGCGATCCTGGGCAACCGTTTCGGCGGCGACGGGCGCACCACCTTCC
AGTTGCCCGACTTGCGCAACCGCGTTCCCATGGGCCTGCAGACGGTGGATCAGCCGCCCGGCCCGACGGGCGCCGCGTCG
CATTCCGTGGTGCTCAACGGAGCGGCGGCGGGCATGGTCTCCGCCAGCCAGTTGCCGCCGGTGGGCGGCAACGTATCCCT
GGGCATTCCTGCGAACAGCGCGCCGACACCGGCCAACGTGACCGATACGCCCGGTCCCGCGGTCGTGCAGTGCAAGGGGA
AGGGAGGCAACTTCGACGTCAGGAAATGGACGAGCGATGCCCCGAATGCGAACCTCAAGCCGTTCGATGCCCCCGTGACC
GTCGCCCCGGTGGGTGCCCAGCAGCCCCTGAGCCTGCCGGTGGCAGCGTCCGGGACGGTGGGCACGCTCCAGCCGTCGCT
GACGGTGGCCTTCATCATCTGCGTGCAGGGGCTGTTTCCGCCCCGGCCCGACTGA

Upstream 100 bases:

>100_bases
ACGGGCCGGCTGTGTCCCATGGGCTCCGCATTGCCGCCAGCGGCAGGACTGCGCCGCGGGCTGCGGAGCGTTCCAGACAT
CTTGAGGAAAGAGGGAAATC

Downstream 100 bases:

>100_bases
GCCCGCCCTCAGGTCACCGCGCCCCGGGCGTCCACGCGCAGGATGCGCTCGACCACGCCGTGCGCGAGCCCGCCCCGCAC
GCCGATGAGGTGGCCGTGGA

Product: phage tail collar domain-containing protein

Products: NA

Alternate protein names: Phage Tail Collar Domain-Containing Protein; Phage Tail Collar; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Microcystin Dependent; Phenylacrylic Acid Decarboxylase; Cell Wall/Surface Repeat Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MDESYIGTVLLWTAAFVPRGWALCDGSVLNITQNPALFAILGNRFGGDGRTTFQLPDLRNRVPMGLQTVDQPPGPTGAAS
HSVVLNGAAAGMVSASQLPPVGGNVSLGIPANSAPTPANVTDTPGPAVVQCKGKGGNFDVRKWTSDAPNANLKPFDAPVT
VAPVGAQQPLSLPVAASGTVGTLQPSLTVAFIICVQGLFPPRPD

Sequences:

>Translated_204_residues
MDESYIGTVLLWTAAFVPRGWALCDGSVLNITQNPALFAILGNRFGGDGRTTFQLPDLRNRVPMGLQTVDQPPGPTGAAS
HSVVLNGAAAGMVSASQLPPVGGNVSLGIPANSAPTPANVTDTPGPAVVQCKGKGGNFDVRKWTSDAPNANLKPFDAPVT
VAPVGAQQPLSLPVAASGTVGTLQPSLTVAFIICVQGLFPPRPD
>Mature_204_residues
MDESYIGTVLLWTAAFVPRGWALCDGSVLNITQNPALFAILGNRFGGDGRTTFQLPDLRNRVPMGLQTVDQPPGPTGAAS
HSVVLNGAAAGMVSASQLPPVGGNVSLGIPANSAPTPANVTDTPGPAVVQCKGKGGNFDVRKWTSDAPNANLKPFDAPVT
VAPVGAQQPLSLPVAASGTVGTLQPSLTVAFIICVQGLFPPRPD

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20817; Mature: 20817

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDESYIGTVLLWTAAFVPRGWALCDGSVLNITQNPALFAILGNRFGGDGRTTFQLPDLRN
CCCHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEEEEECCEECCCCCEEEECCCCCC
RVPMGLQTVDQPPGPTGAASHSVVLNGAAAGMVSASQLPPVGGNVSLGIPANSAPTPANV
CCCCCCEECCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCC
TDTPGPAVVQCKGKGGNFDVRKWTSDAPNANLKPFDAPVTVAPVGAQQPLSLPVAASGTV
CCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCC
GTLQPSLTVAFIICVQGLFPPRPD
EEECHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDESYIGTVLLWTAAFVPRGWALCDGSVLNITQNPALFAILGNRFGGDGRTTFQLPDLRN
CCCHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEEEEECCEECCCCCEEEECCCCCC
RVPMGLQTVDQPPGPTGAASHSVVLNGAAAGMVSASQLPPVGGNVSLGIPANSAPTPANV
CCCCCCEECCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCC
TDTPGPAVVQCKGKGGNFDVRKWTSDAPNANLKPFDAPVTVAPVGAQQPLSLPVAASGTV
CCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEECCCCC
GTLQPSLTVAFIICVQGLFPPRPD
EEECHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA