Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612850
Identifier: 120612850
GI number: 120612850
Start: 4671138
End: 4671605
Strand: Direct
Name: 120612850
Synonym: Aave_4214
Alternate gene names: NA
Gene position: 4671138-4671605 (Clockwise)
Preceding gene: 120612848
Following gene: 120612851
Centisome position: 87.27
GC content: 61.11
Gene sequence:
>468_bases ATGGCCGCGAATTCCGGGATACCGGTCCGCTTGGCCGTAGGAGCCAAGGCAGCGCCCGCATTCTCCCCGGCAGCGGCACC GGATTTACGCCCGGTGGTACTGGTTTCGAAGTCCGTCCCCGCCACGGCTCGTGCCGTCAAGGCTTCAGACAGGGATCCGC ACTACATCACCCGAAACGGCACGCACTTCACATACAGGTGCCACGTTCCCTACACCCTTCCGGGCCAGGTGGCAGCCATC GAGGTCTGCGAAATCGAGCCAGTGGATCTGGAAATCCTGTCGTGGCCGGAAACAGAGGTGATCCACATCATTCAGGGCAT GGTGACCGTCACCGGAACAGATGGCTTGGGCAAGACCTACTCGGCCGGAGACATCATCGTGCTGCCTCAAGGATTCAAGG GTACGTGGAGGCAGACCCGGAAGCTCCTCAAGGTCGCCGTACGGCAGCCGCTGTATTGGAAGGAATGA
Upstream 100 bases:
>100_bases CCCTCAAAACCTACCGCACATGCATTTAATTCAATCCCGCCTTGCCATGGTGACGTACCTGTTTCTTGTTTGCTCATCCC TGGCGGGATCGCCCGCGGCC
Downstream 100 bases:
>100_bases AGGTGCCCTGCCAGGAAACAGCAGCATGACGGTGGCTCGTTCACACAACGCCGTCCCACGCAGACCCGTCCATATCGGAG CGGCCTGCTACGCGGCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAANSGIPVRLAVGAKAAPAFSPAAAPDLRPVVLVSKSVPATARAVKASDRDPHYITRNGTHFTYRCHVPYTLPGQVAAI EVCEIEPVDLEILSWPETEVIHIIQGMVTVTGTDGLGKTYSAGDIIVLPQGFKGTWRQTRKLLKVAVRQPLYWKE
Sequences:
>Translated_155_residues MAANSGIPVRLAVGAKAAPAFSPAAAPDLRPVVLVSKSVPATARAVKASDRDPHYITRNGTHFTYRCHVPYTLPGQVAAI EVCEIEPVDLEILSWPETEVIHIIQGMVTVTGTDGLGKTYSAGDIIVLPQGFKGTWRQTRKLLKVAVRQPLYWKE >Mature_154_residues AANSGIPVRLAVGAKAAPAFSPAAAPDLRPVVLVSKSVPATARAVKASDRDPHYITRNGTHFTYRCHVPYTLPGQVAAIE VCEIEPVDLEILSWPETEVIHIIQGMVTVTGTDGLGKTYSAGDIIVLPQGFKGTWRQTRKLLKVAVRQPLYWKE
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16800; Mature: 16668
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANSGIPVRLAVGAKAAPAFSPAAAPDLRPVVLVSKSVPATARAVKASDRDPHYITRNG CCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHEEEECCCCCCCEEEECC THFTYRCHVPYTLPGQVAAIEVCEIEPVDLEILSWPETEVIHIIQGMVTVTGTDGLGKTY CEEEEEEECCEECCCCEEEEEEEECCCCCEEEEECCCHHHHEEEECEEEEECCCCCCCEE SAGDIIVLPQGFKGTWRQTRKLLKVAVRQPLYWKE CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AANSGIPVRLAVGAKAAPAFSPAAAPDLRPVVLVSKSVPATARAVKASDRDPHYITRNG CCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHEEEECCCCCCCEEEECC THFTYRCHVPYTLPGQVAAIEVCEIEPVDLEILSWPETEVIHIIQGMVTVTGTDGLGKTY CEEEEEEECCEECCCCEEEEEEEECCCCCEEEEECCCHHHHEEEECEEEEECCCCCCCEE SAGDIIVLPQGFKGTWRQTRKLLKVAVRQPLYWKE CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA