Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is phhA [H]
Identifier: 120612829
GI number: 120612829
Start: 4645048
End: 4645926
Strand: Direct
Name: phhA [H]
Synonym: Aave_4193
Alternate gene names: 120612829
Gene position: 4645048-4645926 (Clockwise)
Preceding gene: 120612828
Following gene: 120612831
Centisome position: 86.78
GC content: 67.92
Gene sequence:
>879_bases ATGGGCATTCCCGCGCATTGCATAACCAGGAGACATGCCATGGGACAAGCCCCCGTCGTTTACGGCCAATCCGACCGCCC CCCGCGCGGCGACTATGCCCGCGCCGGCAGCGACTACACCTGCGCGCAGGACTATGCGGCCTACACGCCGCAGGACCACG ACACCTACCGGCGCCTGTACGCCCGCCAGTCGGCGCTGCTGCCGGGCCGCGCGAGCGAGGCCTTCATCGCCGCCCTGCCC TCGCTGGGCGCGAGCGACCGCATCCCGCGCTTCGACGAGATCAACGAGCGGCTGCAGCGCGCCACGGGCTGGGAGATCGT GGGCGTCCCGGGCCTGATTCCCGAGGTGCCCTTTTTCACGCTGCTGGCGAACCGCAAGTTTCCGGTGACGGACTGGATCC GCACGCCCGAGGAGTTCGACTACATCGTGGAGCCGGACATCTTCCACGACCTGTTCGGGCACGTGCCGCTGCTCTTCAAC CCGGTGTTCGCCGACTATGTGCAGCGCTACGGCCAGGGGGGCCTGAAGGCGCACGGGCTGGGTGCCTGCGAGATGTTGTC GCGCCTGTACTGGTACACGATCGAATTCGGCCTGATCCGCGAACGCGGTGCGCTGCGTGCCTACGGGGCGGGCATCCTCA GCTCCTCCGGCGAACTGGAATATTCGGTGAACAGCCCCGAGCCGCAGCGCCTGCCGCTGCAGCTGGAACGCACCATGCGC ACGCGCTACAAGATCGACACCTACCAGCAGACGTATTTCGTGATCGACAGCTTCGAGCAGCTGTTCGCGATGACGGAGCC GGACTTCGGGCCGGTGTACGAGCGCCTGCGCGGGCAGGCCGAGTTCGCCGCGGACGAGCGCGAGGCCGTGGCGGCCTGA
Upstream 100 bases:
>100_bases GAAACCTTCGGCCAGTTCGTGCGCGCGGAGCACGCGAAGTACGGCTTCCTGATCAAGGCCGCGAAGATCAAGATGGACTG ACAGCGCGGGGCGCCCTGGC
Downstream 100 bases:
>100_bases GGGGCGCCGGAGGACCGCGCAGGGCCGGGAAGGGCCGGCCTGCGTTGGAAGGCGCCCTGCCGGATGACTTCGTGCGCCGG CAATACGTTTCGGGTGGCGC
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MGIPAHCITRRHAMGQAPVVYGQSDRPPRGDYARAGSDYTCAQDYAAYTPQDHDTYRRLYARQSALLPGRASEAFIAALP SLGASDRIPRFDEINERLQRATGWEIVGVPGLIPEVPFFTLLANRKFPVTDWIRTPEEFDYIVEPDIFHDLFGHVPLLFN PVFADYVQRYGQGGLKAHGLGACEMLSRLYWYTIEFGLIRERGALRAYGAGILSSSGELEYSVNSPEPQRLPLQLERTMR TRYKIDTYQQTYFVIDSFEQLFAMTEPDFGPVYERLRGQAEFAADEREAVAA
Sequences:
>Translated_292_residues MGIPAHCITRRHAMGQAPVVYGQSDRPPRGDYARAGSDYTCAQDYAAYTPQDHDTYRRLYARQSALLPGRASEAFIAALP SLGASDRIPRFDEINERLQRATGWEIVGVPGLIPEVPFFTLLANRKFPVTDWIRTPEEFDYIVEPDIFHDLFGHVPLLFN PVFADYVQRYGQGGLKAHGLGACEMLSRLYWYTIEFGLIRERGALRAYGAGILSSSGELEYSVNSPEPQRLPLQLERTMR TRYKIDTYQQTYFVIDSFEQLFAMTEPDFGPVYERLRGQAEFAADEREAVAA >Mature_291_residues GIPAHCITRRHAMGQAPVVYGQSDRPPRGDYARAGSDYTCAQDYAAYTPQDHDTYRRLYARQSALLPGRASEAFIAALPS LGASDRIPRFDEINERLQRATGWEIVGVPGLIPEVPFFTLLANRKFPVTDWIRTPEEFDYIVEPDIFHDLFGHVPLLFNP VFADYVQRYGQGGLKAHGLGACEMLSRLYWYTIEFGLIRERGALRAYGAGILSSSGELEYSVNSPEPQRLPLQLERTMRT RYKIDTYQQTYFVIDSFEQLFAMTEPDFGPVYERLRGQAEFAADEREAVAA
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI4557819, Length=240, Percent_Identity=34.1666666666667, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI4759248, Length=217, Percent_Identity=34.1013824884793, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI88900503, Length=251, Percent_Identity=35.0597609561753, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI88900505, Length=251, Percent_Identity=35.0597609561753, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI88900501, Length=251, Percent_Identity=35.0597609561753, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI31795563, Length=218, Percent_Identity=33.9449541284404, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17531391, Length=217, Percent_Identity=37.3271889400922, Blast_Score=134, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71980736, Length=224, Percent_Identity=34.375, Blast_Score=128, Evalue=3e-30, Organism=Caenorhabditis elegans, GI115532103, Length=231, Percent_Identity=29.4372294372294, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI115533973, Length=231, Percent_Identity=29.4372294372294, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71980731, Length=152, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24660393, Length=220, Percent_Identity=36.3636363636364, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI62472054, Length=220, Percent_Identity=36.3636363636364, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI17136774, Length=217, Percent_Identity=34.1013824884793, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI17136776, Length=217, Percent_Identity=34.1013824884793, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24654994, Length=219, Percent_Identity=32.4200913242009, Blast_Score=112, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 33123; Mature: 32992
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPAHCITRRHAMGQAPVVYGQSDRPPRGDYARAGSDYTCAQDYAAYTPQDHDTYRRLY CCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCHHHHHHHH ARQSALLPGRASEAFIAALPSLGASDRIPRFDEINERLQRATGWEIVGVPGLIPEVPFFT HHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHH LLANRKFPVTDWIRTPEEFDYIVEPDIFHDLFGHVPLLFNPVFADYVQRYGQGGLKAHGL HHCCCCCCHHHHHCCHHHCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC GACEMLSRLYWYTIEFGLIRERGALRAYGAGILSSSGELEYSVNSPEPQRLPLQLERTMR CHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCCCEEEECCCCCCCCCCHHHHHHHH TRYKIDTYQQTYFVIDSFEQLFAMTEPDFGPVYERLRGQAEFAADEREAVAA HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHCCCCHHHHCC >Mature Secondary Structure GIPAHCITRRHAMGQAPVVYGQSDRPPRGDYARAGSDYTCAQDYAAYTPQDHDTYRRLY CCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCHHHHHHHH ARQSALLPGRASEAFIAALPSLGASDRIPRFDEINERLQRATGWEIVGVPGLIPEVPFFT HHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHH LLANRKFPVTDWIRTPEEFDYIVEPDIFHDLFGHVPLLFNPVFADYVQRYGQGGLKAHGL HHCCCCCCHHHHHCCHHHCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC GACEMLSRLYWYTIEFGLIRERGALRAYGAGILSSSGELEYSVNSPEPQRLPLQLERTMR CHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCCCEEEECCCCCCCCCCHHHHHHHH TRYKIDTYQQTYFVIDSFEQLFAMTEPDFGPVYERLRGQAEFAADEREAVAA HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]