Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612828

Identifier: 120612828

GI number: 120612828

Start: 4644033

End: 4645028

Strand: Direct

Name: 120612828

Synonym: Aave_4192

Alternate gene names: NA

Gene position: 4644033-4645028 (Clockwise)

Preceding gene: 120612827

Following gene: 120612829

Centisome position: 86.76

GC content: 68.07

Gene sequence:

>996_bases
ATGAGCACGAGAGAGAGAGAGACACCCATGTTGCGCCGCAGTTACCTTTTGGCCGTCCTGCTGGCGGGAGGGGCCTGGAG
CGTCCAGGCCCAGAACGCCTCGGCGCCGCTGACCATCGTCGTTCCGTACCCCGCGGGCGGGCCCGTGGACGCGTCCGCCC
GCATCGTGGCGGAGGGCGTGCGCGGCACACTCGGCCCCGTGGAGGTGCAGAACAAGCCGGGCGCCGGCGGCACGACGGGC
GCGGCGCTGGTGGCCAAGGCTCCGAAGGACGCCAACTGGCTGGTGATGGGCGCGGTCGCCACGCATGCGGTGAATCCGTG
GCTGCAGGCAGGCTTCCCGTACGACCCGCTGAAGGATTTCAAGCCGATCGCGCTCGTGGCGCGCACGCCCAACGTGCTCG
TCATGGAAGCGGAGCGTGCCAAGTCGCTGGGCATCCGCACGACCGGGGAGCTGGTGCAGTACCTCAAGAAGAACCCCGAC
CAGTTGCGCTACGGATCGGGCGGCAACGGCAGCATCGGCCACATCGCGGCCGAGATGTTCAAGTCGCTCACCAATACGCG
CGTGGCGCACGTGCCCTTCCAGGGATCCGCGCCCGCGCTCAAAGCCCTGCAGTCGGGAGAGGTCGCGTTCTTGTTCGACA
ACCTCGCCTCGTCGCTGCCGCTGGTCAAGGCCGGCAAGCTCAAGGCCCTCGGCGTGACCAGCCTGGGCCGGGACGACGAG
CTGCCGGACGTGCGCAGCATCAACGACGAGGTGCCGGGATTCAACGTGGTGACGTGGTTCGGGCTGTTCGCCCCGGCCTC
GCTGCCCGATGAGGATGCCCGCCGCTATGCGGCGGCCATCACCGCGGCGATGAAGGAGCCCGACAGTGCGCAGAAGCTCA
AGGAGATGGGCATCGACGCCGAGGACCTGACGCTGGAAACCTTCGGCCAGTTCGTGCGCGCGGAGCACGCGAAGTACGGC
TTCCTGATCAAGGCCGCGAAGATCAAGATGGACTGA

Upstream 100 bases:

>100_bases
TGCTGCAGGGCGCCTGAAAGAACGCCTAAAGCCATTGGCAGGCCGATTGACGTAACCAACTGCATCGGCATGGCCCCCGT
CTCTATACTGCGCCGTCCCA

Downstream 100 bases:

>100_bases
CAGCGCGGGGCGCCCTGGCATGGGCATTCCCGCGCATTGCATAACCAGGAGACATGCCATGGGACAAGCCCCCGTCGTTT
ACGGCCAATCCGACCGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSTRERETPMLRRSYLLAVLLAGGAWSVQAQNASAPLTIVVPYPAGGPVDASARIVAEGVRGTLGPVEVQNKPGAGGTTG
AALVAKAPKDANWLVMGAVATHAVNPWLQAGFPYDPLKDFKPIALVARTPNVLVMEAERAKSLGIRTTGELVQYLKKNPD
QLRYGSGGNGSIGHIAAEMFKSLTNTRVAHVPFQGSAPALKALQSGEVAFLFDNLASSLPLVKAGKLKALGVTSLGRDDE
LPDVRSINDEVPGFNVVTWFGLFAPASLPDEDARRYAAAITAAMKEPDSAQKLKEMGIDAEDLTLETFGQFVRAEHAKYG
FLIKAAKIKMD

Sequences:

>Translated_331_residues
MSTRERETPMLRRSYLLAVLLAGGAWSVQAQNASAPLTIVVPYPAGGPVDASARIVAEGVRGTLGPVEVQNKPGAGGTTG
AALVAKAPKDANWLVMGAVATHAVNPWLQAGFPYDPLKDFKPIALVARTPNVLVMEAERAKSLGIRTTGELVQYLKKNPD
QLRYGSGGNGSIGHIAAEMFKSLTNTRVAHVPFQGSAPALKALQSGEVAFLFDNLASSLPLVKAGKLKALGVTSLGRDDE
LPDVRSINDEVPGFNVVTWFGLFAPASLPDEDARRYAAAITAAMKEPDSAQKLKEMGIDAEDLTLETFGQFVRAEHAKYG
FLIKAAKIKMD
>Mature_330_residues
STRERETPMLRRSYLLAVLLAGGAWSVQAQNASAPLTIVVPYPAGGPVDASARIVAEGVRGTLGPVEVQNKPGAGGTTGA
ALVAKAPKDANWLVMGAVATHAVNPWLQAGFPYDPLKDFKPIALVARTPNVLVMEAERAKSLGIRTTGELVQYLKKNPDQ
LRYGSGGNGSIGHIAAEMFKSLTNTRVAHVPFQGSAPALKALQSGEVAFLFDNLASSLPLVKAGKLKALGVTSLGRDDEL
PDVRSINDEVPGFNVVTWFGLFAPASLPDEDARRYAAAITAAMKEPDSAQKLKEMGIDAEDLTLETFGQFVRAEHAKYGF
LIKAAKIKMD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35133; Mature: 35002

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRERETPMLRRSYLLAVLLAGGAWSVQAQNASAPLTIVVPYPAGGPVDASARIVAEGV
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHCC
RGTLGPVEVQNKPGAGGTTGAALVAKAPKDANWLVMGAVATHAVNPWLQAGFPYDPLKDF
CCCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHCCHHHHCCCCCCCCCCC
KPIALVARTPNVLVMEAERAKSLGIRTTGELVQYLKKNPDQLRYGSGGNGSIGHIAAEMF
CCEEEEEECCCEEEEECHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHH
KSLTNTRVAHVPFQGSAPALKALQSGEVAFLFDNLASSLPLVKAGKLKALGVTSLGRDDE
HHHHCCEEEEECCCCCCHHHHHHCCCCEEEEEHHHHHCCCCEECCCEEEEEECCCCCCCC
LPDVRSINDEVPGFNVVTWFGLFAPASLPDEDARRYAAAITAAMKEPDSAQKLKEMGIDA
CCCHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH
EDLTLETFGQFVRAEHAKYGFLIKAAKIKMD
HHCCHHHHHHHHHHHCCCCCEEEEEEEEECC
>Mature Secondary Structure 
STRERETPMLRRSYLLAVLLAGGAWSVQAQNASAPLTIVVPYPAGGPVDASARIVAEGV
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHCC
RGTLGPVEVQNKPGAGGTTGAALVAKAPKDANWLVMGAVATHAVNPWLQAGFPYDPLKDF
CCCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHCCHHHHCCCCCCCCCCC
KPIALVARTPNVLVMEAERAKSLGIRTTGELVQYLKKNPDQLRYGSGGNGSIGHIAAEMF
CCEEEEEECCCEEEEECHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHH
KSLTNTRVAHVPFQGSAPALKALQSGEVAFLFDNLASSLPLVKAGKLKALGVTSLGRDDE
HHHHCCEEEEECCCCCCHHHHHHCCCCEEEEEHHHHHCCCCEECCCEEEEEECCCCCCCC
LPDVRSINDEVPGFNVVTWFGLFAPASLPDEDARRYAAAITAAMKEPDSAQKLKEMGIDA
CCCHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH
EDLTLETFGQFVRAEHAKYGFLIKAAKIKMD
HHCCHHHHHHHHHHHCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]