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The map label for this gene is glyQ [H]

Identifier: 120612815

GI number: 120612815

Start: 4629706

End: 4630650

Strand: Reverse

Name: glyQ [H]

Synonym: Aave_4178

Alternate gene names: 120612815

Gene position: 4630650-4629706 (Counterclockwise)

Preceding gene: 120612817

Following gene: 120612814

Centisome position: 86.51

GC content: 66.77

Gene sequence:

>945_bases
ATGTTGACCTTCCAGCAAATCATCCTGAAGCTGCAGTCGTACTGGGACGCCCAGGGCTGCGCGCTCCTGCAGCCCTACGA
CATGGAAGTGGGCGCGGGCACCTCGCACACCGCGACCTTCCTGCGCGCGCTGGGGCCGGAGCCCTGGAAGGCCGCCTACG
TGCAGCCCAGCCGCCGGCCCAAGGACGGCCGCTACGGAGAGAACCCGAACCGCCTGCAGCACTACTACCAGTACCAGGTG
GTGCTCAAGCCCGCGCCGGACAACATCCTGGAGCTGTACCTGGGCTCGCTCGAGGCGCTGGGCTTCGACCTGAAGAAGAA
CGACATCCGCTTTGTCGAGGATGACTGGGAGAACCCCACGCTCGGCGCCTGGGGCCTGGGGTGGGAGGTCTGGCTCAATG
GCATGGAGGTGACGCAGTTCACCTATTTCCAGCAGGTGGGCGGCATCGACTGCAAGCCCGCCACGGGCGAGATCACCTAC
GGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTGGACAACGTCTACAACCTCGCCTGGACCGATACGCTCAAGTACGG
CGACGTCTATCACCAGAACGAGGTGGAGCAGTCCACCTACAACTTCGAGCATTCCGACGCCGACTTCCTCTTCACCGCCT
TCGCTGCGCACGAGAAGCAGGCGCAGTACCTCATGGGCCAGCAGCTCGCGCTGCCCGCCTACGAGCAGGTGCTCAAGGCC
GCGCACAGCTTCAACCTGCTGGACGCGCGCGGCGCCATTTCCGTGACCGAGCGCGCCGCCTACATCGGCCGCATCCGCAA
CCTCGCGCGCGCCGTGGCCCGCAGCTACCTGGACAGCCGCGCGCGCCTGGGCTTCCCCATGGCGCCCCGCGCCTGGGCCG
ACGAAGTGCTGGCCGACATCGCCAAGGCCGAGCAGCAGCAATCGCAGAAGAAGGACGCCGCCTGA

Upstream 100 bases:

>100_bases
CCCCGTAGAATCCCCGGTTCCGCGCGCTGCGCGACCATCCTCCAAGACCGCGCGCCCGGGCAGACGGCTTGCAGCCGCCC
GGCCGCCAGGACACACACGC

Downstream 100 bases:

>100_bases
GGGCGCCGGGACCGCGGACCGAGAGACACCACCATGACCCATCCGAATCTTCTCGTTGAACTGTTCGTCGAAGAGCTGCC
CCCGAAGGCCCTGCAGAAGC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLTFQQIILKLQSYWDAQGCALLQPYDMEVGAGTSHTATFLRALGPEPWKAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPDNILELYLGSLEALGFDLKKNDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCKPATGEITY
GLERLAMYLQGVDNVYNLAWTDTLKYGDVYHQNEVEQSTYNFEHSDADFLFTAFAAHEKQAQYLMGQQLALPAYEQVLKA
AHSFNLLDARGAISVTERAAYIGRIRNLARAVARSYLDSRARLGFPMAPRAWADEVLADIAKAEQQQSQKKDAA

Sequences:

>Translated_314_residues
MLTFQQIILKLQSYWDAQGCALLQPYDMEVGAGTSHTATFLRALGPEPWKAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPDNILELYLGSLEALGFDLKKNDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCKPATGEITY
GLERLAMYLQGVDNVYNLAWTDTLKYGDVYHQNEVEQSTYNFEHSDADFLFTAFAAHEKQAQYLMGQQLALPAYEQVLKA
AHSFNLLDARGAISVTERAAYIGRIRNLARAVARSYLDSRARLGFPMAPRAWADEVLADIAKAEQQQSQKKDAA
>Mature_314_residues
MLTFQQIILKLQSYWDAQGCALLQPYDMEVGAGTSHTATFLRALGPEPWKAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPDNILELYLGSLEALGFDLKKNDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCKPATGEITY
GLERLAMYLQGVDNVYNLAWTDTLKYGDVYHQNEVEQSTYNFEHSDADFLFTAFAAHEKQAQYLMGQQLALPAYEQVLKA
AHSFNLLDARGAISVTERAAYIGRIRNLARAVARSYLDSRARLGFPMAPRAWADEVLADIAKAEQQQSQKKDAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=292, Percent_Identity=73.6301369863014, Blast_Score=450, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 35597; Mature: 35597

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFQQIILKLQSYWDAQGCALLQPYDMEVGAGTSHTATFLRALGPEPWKAAYVQPSRRP
CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCC
KDGRYGENPNRLQHYYQYQVVLKPAPDNILELYLGSLEALGFDLKKNDIRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCKPATGEITYGLERLAMYLQGVDNVYNLAW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TDTLKYGDVYHQNEVEQSTYNFEHSDADFLFTAFAAHEKQAQYLMGQQLALPAYEQVLKA
HCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AHSFNLLDARGAISVTERAAYIGRIRNLARAVARSYLDSRARLGFPMAPRAWADEVLADI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AKAEQQQSQKKDAA
HHHHHHHHHHCCCC
>Mature Secondary Structure
MLTFQQIILKLQSYWDAQGCALLQPYDMEVGAGTSHTATFLRALGPEPWKAAYVQPSRRP
CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCC
KDGRYGENPNRLQHYYQYQVVLKPAPDNILELYLGSLEALGFDLKKNDIRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCKPATGEITYGLERLAMYLQGVDNVYNLAW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TDTLKYGDVYHQNEVEQSTYNFEHSDADFLFTAFAAHEKQAQYLMGQQLALPAYEQVLKA
HCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AHSFNLLDARGAISVTERAAYIGRIRNLARAVARSYLDSRARLGFPMAPRAWADEVLADI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AKAEQQQSQKKDAA
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA