Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612804

Identifier: 120612804

GI number: 120612804

Start: 4620281

End: 4621024

Strand: Direct

Name: 120612804

Synonym: Aave_4167

Alternate gene names: NA

Gene position: 4620281-4621024 (Clockwise)

Preceding gene: 120612799

Following gene: 120612805

Centisome position: 86.32

GC content: 67.61

Gene sequence:

>744_bases
ATGGACCGGGTCCGCCGCGCGCGGACCGGCAAGAGCACGCGACAACTATCCCCCGCCCAAGGCACAAGGGAGGCACCGAT
GGCAAAGAAAGCGCCGCGGCGTACCGCGGAGCGCATCCTGGAGACAACGCTGGAGCTGTTCAACCGCTTCGGGGAACCCA
ATGTGTCCACCACGGCCATCTCGGCGGAGCTGCGCATCAGCCCGGGCAACCTGTACTACCACTATCCGGCCAAGGACGAG
CTGGTCACGGCGCTCTACGCGCGCTATGAAGCGGAGCTGTCCGAGCTGCTGGAGTCCGCCCCCGGGGTGCGCGACGTGGA
GGATGCCCGGCTGCTGCTGCATGCGGTGCTCGAGCGCATCTGGCAGTACCGGTTCCTCTACCGGGACCTCAACGACCTGA
TGTCGCGCAACCGGCATGTGGAGACGCATTTCCGGGAGCTGCTGGCGCGCAAGGCCGGCGCCATGCGTGCCATGCTGCGG
GGCATGGAGCAGGCGGGCTCGCTGCGGTTCGGACCGCGGGAACTCGATACCGTGGCCGACAATCTCATGGTGGCCGTCAC
GTACTGGTTGAGCTTCGAGTACGTCCGCGATCCGCGGCACGCGCTGGAGCCCTCCAATGCACGGAGCATGCTGCTGCGCG
GGGCCCAGCATGTGCTGGGACTGCTGGGGCCCTACCTCACCGACGGCCAGCGCCTGCATCTCCAGGCTTTGGACGACAGC
CACGCACCGGCCGATGCCGCATGA

Upstream 100 bases:

>100_bases
CAGGGTGGAGGATGGCCCCTCGCAAGACCCCGCATGATGCACTGCAACAGGACGCGGAGGCTGTGGCAGGGTAGAGTGGA
CCGGCAAGGGAGCGGGGAAC

Downstream 100 bases:

>100_bases
TGCGGCCGCCTTTCTTCCGGACGAACGCAGGACACGCCATGCCATCCTGGACCCCCTTCCCCTATGGCGGCGAGTACGCC
TTCACGACCGGCGACGTGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator PhaD; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDRVRRARTGKSTRQLSPAQGTREAPMAKKAPRRTAERILETTLELFNRFGEPNVSTTAISAELRISPGNLYYHYPAKDE
LVTALYARYEAELSELLESAPGVRDVEDARLLLHAVLERIWQYRFLYRDLNDLMSRNRHVETHFRELLARKAGAMRAMLR
GMEQAGSLRFGPRELDTVADNLMVAVTYWLSFEYVRDPRHALEPSNARSMLLRGAQHVLGLLGPYLTDGQRLHLQALDDS
HAPADAA

Sequences:

>Translated_247_residues
MDRVRRARTGKSTRQLSPAQGTREAPMAKKAPRRTAERILETTLELFNRFGEPNVSTTAISAELRISPGNLYYHYPAKDE
LVTALYARYEAELSELLESAPGVRDVEDARLLLHAVLERIWQYRFLYRDLNDLMSRNRHVETHFRELLARKAGAMRAMLR
GMEQAGSLRFGPRELDTVADNLMVAVTYWLSFEYVRDPRHALEPSNARSMLLRGAQHVLGLLGPYLTDGQRLHLQALDDS
HAPADAA
>Mature_247_residues
MDRVRRARTGKSTRQLSPAQGTREAPMAKKAPRRTAERILETTLELFNRFGEPNVSTTAISAELRISPGNLYYHYPAKDE
LVTALYARYEAELSELLESAPGVRDVEDARLLLHAVLERIWQYRFLYRDLNDLMSRNRHVETHFRELLARKAGAMRAMLR
GMEQAGSLRFGPRELDTVADNLMVAVTYWLSFEYVRDPRHALEPSNARSMLLRGAQHVLGLLGPYLTDGQRLHLQALDDS
HAPADAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28112; Mature: 28112

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVRRARTGKSTRQLSPAQGTREAPMAKKAPRRTAERILETTLELFNRFGEPNVSTTAI
CCCHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
SAELRISPGNLYYHYPAKDELVTALYARYEAELSELLESAPGVRDVEDARLLLHAVLERI
EEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
WQYRFLYRDLNDLMSRNRHVETHFRELLARKAGAMRAMLRGMEQAGSLRFGPRELDTVAD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NLMVAVTYWLSFEYVRDPRHALEPSNARSMLLRGAQHVLGLLGPYLTDGQRLHLQALDDS
HHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
HAPADAA
CCCCCCC
>Mature Secondary Structure
MDRVRRARTGKSTRQLSPAQGTREAPMAKKAPRRTAERILETTLELFNRFGEPNVSTTAI
CCCHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
SAELRISPGNLYYHYPAKDELVTALYARYEAELSELLESAPGVRDVEDARLLLHAVLERI
EEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
WQYRFLYRDLNDLMSRNRHVETHFRELLARKAGAMRAMLRGMEQAGSLRFGPRELDTVAD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NLMVAVTYWLSFEYVRDPRHALEPSNARSMLLRGAQHVLGLLGPYLTDGQRLHLQALDDS
HHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
HAPADAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA