Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612799
Identifier: 120612799
GI number: 120612799
Start: 4616286
End: 4616600
Strand: Direct
Name: 120612799
Synonym: Aave_4162
Alternate gene names: NA
Gene position: 4616286-4616600 (Clockwise)
Preceding gene: 120612798
Following gene: 120612804
Centisome position: 86.24
GC content: 67.62
Gene sequence:
>315_bases GTGAGCCTGTACGGGGAGCCGACCTACGGCCGGCCCTATTTCGACTGGCTCGCCGCCAGCGCCACCGCCCATTACGGAGT CACCGAATTCCATCCGCTCAAGGCCATGGATGCCGCGGAGATGCGGCGCGTCTTGCAGGCCCATGCGGCGCGCGGAGCGG AGTTCCTGTCCTTCTTCCTGGAGCCGCTCTGGAATGGCGAATTGGTGCCGCGAGGGCACAACATCTTTTCCTTCGACCCG GACAACCGGCAGTTCGCCTCGGACCGGCTGTACGAGGCCGTGCGCGGGGCGCTCGCACCCGCGGTCCGGCCATGA
Upstream 100 bases:
>100_bases TACCCACTAGATCATCCCGTTCACCAATCCCGGCTGGGATGCGAACAAGTTCGCGATCCAGGACTCGCTGCGTCCTGCAC AGACCGGCATCCGGCTGGGC
Downstream 100 bases:
>100_bases GCGGGCCGGAGGGAACCGCTCAGGGGAAGACTTCCGCCTCGCGCAGGGCCGCGCCTTTCGCGTCCTTGGCGGACAGGCTG GGCTCCCCGGCGAACCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSLYGEPTYGRPYFDWLAASATAHYGVTEFHPLKAMDAAEMRRVLQAHAARGAEFLSFFLEPLWNGELVPRGHNIFSFDP DNRQFASDRLYEAVRGALAPAVRP
Sequences:
>Translated_104_residues MSLYGEPTYGRPYFDWLAASATAHYGVTEFHPLKAMDAAEMRRVLQAHAARGAEFLSFFLEPLWNGELVPRGHNIFSFDP DNRQFASDRLYEAVRGALAPAVRP >Mature_103_residues SLYGEPTYGRPYFDWLAASATAHYGVTEFHPLKAMDAAEMRRVLQAHAARGAEFLSFFLEPLWNGELVPRGHNIFSFDPD NRQFASDRLYEAVRGALAPAVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11730; Mature: 11599
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYGEPTYGRPYFDWLAASATAHYGVTEFHPLKAMDAAEMRRVLQAHAARGAEFLSFFL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHH EPLWNGELVPRGHNIFSFDPDNRQFASDRLYEAVRGALAPAVRP HHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLYGEPTYGRPYFDWLAASATAHYGVTEFHPLKAMDAAEMRRVLQAHAARGAEFLSFFL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHH EPLWNGELVPRGHNIFSFDPDNRQFASDRLYEAVRGALAPAVRP HHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA