Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612792
Identifier: 120612792
GI number: 120612792
Start: 4609493
End: 4610167
Strand: Reverse
Name: 120612792
Synonym: Aave_4155
Alternate gene names: NA
Gene position: 4610167-4609493 (Counterclockwise)
Preceding gene: 120612793
Following gene: 120612791
Centisome position: 86.13
GC content: 66.96
Gene sequence:
>675_bases ATGGGGCGGGTCCGCCGAAGCCGCGAGCGGGAAACGGGGTTCACCCTCGTGGAACTGCTCGTCGTGATCTCCCTGCTGTC GCTGGTCATGCTGGCCATGGCCTCCGCCCTGCGCACCACCGCGCAGACGGAAGAGCGCGTGGATGCCCGCCTGCGCAAGG TGGACGACCTGCGGACCACCGACGGTTTCCTGCGTTCGGTGCTCGGACGGATATCCCTGCGCAAACGGCCGGGGATCACC AATGTCAATGAAAACGCATACTATTTCTTCGGGGGGCCGCAGGAAATGGCGTGGGTGGGCATCATGCCCGCCCGGTATGG CGTGGGGGGGCGCTTCTTCCTGCGATTGGGCCTGGAGGACGGACCTGCCGGCCAGTCGCTCGTACTCCGATACCTTCCCT TCGTGGATTCGCCCGCCTTGCCGGACTGGGGACGGGCCGAGACCTACGTGCTGGTGCCCGCCGTGAGCGGATTCGAACTC CGCTATGAGGACGCGTCGCCGGAGCCTCCGCAATGGGGTGCCCCCTGGACGATCACCGACCGCCTTCCCCAGCGGGTATC GGTACAGATCCGCACCGCCACCGATGCCTGGCCGGAAATCGTGGTGCCCATGCGGGCGCTGCCGAACAGCGATCCTTCCA TCGGTGGCGCCACGTTCGGAGGCAGCAGCCGATGA
Upstream 100 bases:
>100_bases TGATGATCGTCATCTCCTGGTCGGACGGGACCCGCACCCGCACTTTTGAACTCAGCACCCTGCGCCCGCAGCGCAGGCTG CCGGAACCGGGACGCGGCTG
Downstream 100 bases:
>100_bases GAGCGCCTGTCCACTACCGTGCCGGCCGCTCGTCGCGTGGCATGGCACTCATCGCGGTGCTCTGGATCGTGGCGTCGCTC AGCATCATCGTTACCGGAGT
Product: general secretion pathway protein J
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MGRVRRSRERETGFTLVELLVVISLLSLVMLAMASALRTTAQTEERVDARLRKVDDLRTTDGFLRSVLGRISLRKRPGIT NVNENAYYFFGGPQEMAWVGIMPARYGVGGRFFLRLGLEDGPAGQSLVLRYLPFVDSPALPDWGRAETYVLVPAVSGFEL RYEDASPEPPQWGAPWTITDRLPQRVSVQIRTATDAWPEIVVPMRALPNSDPSIGGATFGGSSR
Sequences:
>Translated_224_residues MGRVRRSRERETGFTLVELLVVISLLSLVMLAMASALRTTAQTEERVDARLRKVDDLRTTDGFLRSVLGRISLRKRPGIT NVNENAYYFFGGPQEMAWVGIMPARYGVGGRFFLRLGLEDGPAGQSLVLRYLPFVDSPALPDWGRAETYVLVPAVSGFEL RYEDASPEPPQWGAPWTITDRLPQRVSVQIRTATDAWPEIVVPMRALPNSDPSIGGATFGGSSR >Mature_223_residues GRVRRSRERETGFTLVELLVVISLLSLVMLAMASALRTTAQTEERVDARLRKVDDLRTTDGFLRSVLGRISLRKRPGITN VNENAYYFFGGPQEMAWVGIMPARYGVGGRFFLRLGLEDGPAGQSLVLRYLPFVDSPALPDWGRAETYVLVPAVSGFELR YEDASPEPPQWGAPWTITDRLPQRVSVQIRTATDAWPEIVVPMRALPNSDPSIGGATFGGSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24825; Mature: 24694
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVRRSRERETGFTLVELLVVISLLSLVMLAMASALRTTAQTEERVDARLRKVDDLRTT CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGFLRSVLGRISLRKRPGITNVNENAYYFFGGPQEMAWVGIMPARYGVGGRFFLRLGLED HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHCCCCCEEEEEEECCC GPAGQSLVLRYLPFVDSPALPDWGRAETYVLVPAVSGFELRYEDASPEPPQWGAPWTITD CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEECC RLPQRVSVQIRTATDAWPEIVVPMRALPNSDPSIGGATFGGSSR CCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GRVRRSRERETGFTLVELLVVISLLSLVMLAMASALRTTAQTEERVDARLRKVDDLRTT CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGFLRSVLGRISLRKRPGITNVNENAYYFFGGPQEMAWVGIMPARYGVGGRFFLRLGLED HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHCCCCCEEEEEEECCC GPAGQSLVLRYLPFVDSPALPDWGRAETYVLVPAVSGFELRYEDASPEPPQWGAPWTITD CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEECC RLPQRVSVQIRTATDAWPEIVVPMRALPNSDPSIGGATFGGSSR CCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA