Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612791
Identifier: 120612791
GI number: 120612791
Start: 4608636
End: 4609496
Strand: Reverse
Name: 120612791
Synonym: Aave_4154
Alternate gene names: NA
Gene position: 4609496-4608636 (Counterclockwise)
Preceding gene: 120612792
Following gene: 120612790
Centisome position: 86.11
GC content: 67.13
Gene sequence:
>861_bases ATGAGAGCGCCTGTCCACTACCGTGCCGGCCGCTCGTCGCGTGGCATGGCACTCATCGCGGTGCTCTGGATCGTGGCGTC GCTCAGCATCATCGTTACCGGAGTGACGCGGACCATCCGCGAAGAGGCTCGCATGATGGCGCTGGCCCGGCAGAACGTGC AGGCGCAGGCCCTGGGCGATGCAGCCATCCAGTTGGCCCTGCAGGCCATCGTCGCCAACAACACGCCCATCAATCGCATG CTGCAGTCGGAAATCCGCTACGGAGGCGTCGCCATGCAGGTGCGGGCCATGCCGCTGAACGGCCTCATCGACATCAACAG CGCGCCGGTTCCGCTGCTGGCCAAGGTATATGCGATCGCGGGCGGCGTACCTGCCGGGCAGGCGGACGCGTTGGCGCAGG CCACCGTGCAGGTCCGCGAGCAGCGCGGTCCGGCGGGGCTGCAGGAGCGCTTCGAATCCGAGGAAGACCTGCTCAAGGTC CCAGGGATCGACTATGGCCTCTATGCTAGACTTTTTCCCCTCGTCACTGCCGACTTGCGGGGTAGGGGGCTGGTGAATCC CCTGGCCGCGCCCGTTGAGGTCCTGACGGTACTGGCCAGCGGGAATGCGGCCGCAGCCAGGGTCATCGCCGACAAGCGCG ACGCGGGTGAACCGGGGGTGGATACGAGTGCGCTCGACAGCGCTTTCCTCGATAGCTCCTCGGTTCGGCGGATCCGCATG GAGGCCCGGGTTCCCATGCCGGACGGCACTTGGCTGCGCGTATCGCGCAGCGTCGATCTGACCGCACGCGCCCGTGATGG AGCTCCGTGGTATTCCTTCCGCACCGGGTCCAGCGTGGAGCCGGTGGTCCGCAATCCCTGA
Upstream 100 bases:
>100_bases GCACCGCCACCGATGCCTGGCCGGAAATCGTGGTGCCCATGCGGGCGCTGCCGAACAGCGATCCTTCCATCGGTGGCGCC ACGTTCGGAGGCAGCAGCCG
Downstream 100 bases:
>100_bases AAAGCGATGCCCTCTTTCTCTTCTGAAGCCCGTTTTCTGGGAGTCGATCTGCGCGTGCTGTGGCGCGACATCCGCCAGCC CTGGTCGCACATGCACGACT
Product: general secretory pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRAPVHYRAGRSSRGMALIAVLWIVASLSIIVTGVTRTIREEARMMALARQNVQAQALGDAAIQLALQAIVANNTPINRM LQSEIRYGGVAMQVRAMPLNGLIDINSAPVPLLAKVYAIAGGVPAGQADALAQATVQVREQRGPAGLQERFESEEDLLKV PGIDYGLYARLFPLVTADLRGRGLVNPLAAPVEVLTVLASGNAAAARVIADKRDAGEPGVDTSALDSAFLDSSSVRRIRM EARVPMPDGTWLRVSRSVDLTARARDGAPWYSFRTGSSVEPVVRNP
Sequences:
>Translated_286_residues MRAPVHYRAGRSSRGMALIAVLWIVASLSIIVTGVTRTIREEARMMALARQNVQAQALGDAAIQLALQAIVANNTPINRM LQSEIRYGGVAMQVRAMPLNGLIDINSAPVPLLAKVYAIAGGVPAGQADALAQATVQVREQRGPAGLQERFESEEDLLKV PGIDYGLYARLFPLVTADLRGRGLVNPLAAPVEVLTVLASGNAAAARVIADKRDAGEPGVDTSALDSAFLDSSSVRRIRM EARVPMPDGTWLRVSRSVDLTARARDGAPWYSFRTGSSVEPVVRNP >Mature_286_residues MRAPVHYRAGRSSRGMALIAVLWIVASLSIIVTGVTRTIREEARMMALARQNVQAQALGDAAIQLALQAIVANNTPINRM LQSEIRYGGVAMQVRAMPLNGLIDINSAPVPLLAKVYAIAGGVPAGQADALAQATVQVREQRGPAGLQERFESEEDLLKV PGIDYGLYARLFPLVTADLRGRGLVNPLAAPVEVLTVLASGNAAAARVIADKRDAGEPGVDTSALDSAFLDSSSVRRIRM EARVPMPDGTWLRVSRSVDLTARARDGAPWYSFRTGSSVEPVVRNP
Specific function: Unknown
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30556; Mature: 30556
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPVHYRAGRSSRGMALIAVLWIVASLSIIVTGVTRTIREEARMMALARQNVQAQALGD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AAIQLALQAIVANNTPINRMLQSEIRYGGVAMQVRAMPLNGLIDINSAPVPLLAKVYAIA HHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEEECCCCEEECCCCCHHHHHHHHHHH GGVPAGQADALAQATVQVREQRGPAGLQERFESEEDLLKVPGIDYGLYARLFPLVTADLR CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHCCC GRGLVNPLAAPVEVLTVLASGNAAAARVIADKRDAGEPGVDTSALDSAFLDSSSVRRIRM CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHEEHH EARVPMPDGTWLRVSRSVDLTARARDGAPWYSFRTGSSVEPVVRNP EECCCCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MRAPVHYRAGRSSRGMALIAVLWIVASLSIIVTGVTRTIREEARMMALARQNVQAQALGD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AAIQLALQAIVANNTPINRMLQSEIRYGGVAMQVRAMPLNGLIDINSAPVPLLAKVYAIA HHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEEECCCCEEECCCCCHHHHHHHHHHH GGVPAGQADALAQATVQVREQRGPAGLQERFESEEDLLKVPGIDYGLYARLFPLVTADLR CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHCCC GRGLVNPLAAPVEVLTVLASGNAAAARVIADKRDAGEPGVDTSALDSAFLDSSSVRRIRM CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHEEHH EARVPMPDGTWLRVSRSVDLTARARDGAPWYSFRTGSSVEPVVRNP EECCCCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA