Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612788
Identifier: 120612788
GI number: 120612788
Start: 4606151
End: 4606762
Strand: Reverse
Name: 120612788
Synonym: Aave_4151
Alternate gene names: NA
Gene position: 4606762-4606151 (Counterclockwise)
Preceding gene: 120612789
Following gene: 120612787
Centisome position: 86.06
GC content: 69.77
Gene sequence:
>612_bases ATGAAGCGCTACTCCCTGCACCTGCTGCTTTGCGTGAATGCCGCACTGGCGCTGGTGCTTCTATGGATGTGGGTCTCTCC GGACGGCACCCTGCGCAACGTCCGCTGGCAGTCTCCCGAACCTCGCAGGTCGGACGTCGGCGGCCTGATGCCCGTGCTGC CCACGGTCGGCACGGCCGATACCCGCGCGTTCGTCGCCATGCTGGATAGGCCGCTGTTTTCGGTGTCGCGCCGTCCCCCG CCGCCGCCGCCGCCGCCTTCGGCCAGCGAACCTCCCCCGGACAATCTCTCTTCGGCACGCCTGTCGGGTGTGTACTCGGG CGGCGGGGAAGGCGGCGTCATCATCCAGGTGGCCGGGAAGCAGCACCGGCTGCGCATGAACGACAACATCGACGGCTGGG TGCTGAAATCCATCCAGGATCGCGTGGTGTCCTTCAGCCGTGGAGGAGAGACGCGCACGCTGCTTCTGCCCAGGGCCGCC GTGACGGTGTATTCCGGCGCGCCGCTCCCTTCCCCTGGCTCCAACGTCGGCCAGCCGCCGGTGGCTCCGCCTTCAGCGGG CGCGGCCAACTCGCCGCGCCGCGCGGTCTTCGGCGGAAGCCGGGCCCGTTGA
Upstream 100 bases:
>100_bases ACCTCGAAATCCAGGTGAACGTCGGGTTCGGCAACGTGGATCCGAAGAGCGCGCCGCGGTTGTCCGTCGCGTTCGGCCTG AGCGTGCTGAGGGAGCGGTC
Downstream 100 bases:
>100_bases ATTCCAGCGCAGGTGCGCTTTCCCATCTTCCGGGTACGTAAGTCATGATTTTTTATCGATACGCTCTGACCTCCATCGCT ATGGCCGTCTGCCAGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKRYSLHLLLCVNAALALVLLWMWVSPDGTLRNVRWQSPEPRRSDVGGLMPVLPTVGTADTRAFVAMLDRPLFSVSRRPP PPPPPPSASEPPPDNLSSARLSGVYSGGGEGGVIIQVAGKQHRLRMNDNIDGWVLKSIQDRVVSFSRGGETRTLLLPRAA VTVYSGAPLPSPGSNVGQPPVAPPSAGAANSPRRAVFGGSRAR
Sequences:
>Translated_203_residues MKRYSLHLLLCVNAALALVLLWMWVSPDGTLRNVRWQSPEPRRSDVGGLMPVLPTVGTADTRAFVAMLDRPLFSVSRRPP PPPPPPSASEPPPDNLSSARLSGVYSGGGEGGVIIQVAGKQHRLRMNDNIDGWVLKSIQDRVVSFSRGGETRTLLLPRAA VTVYSGAPLPSPGSNVGQPPVAPPSAGAANSPRRAVFGGSRAR >Mature_203_residues MKRYSLHLLLCVNAALALVLLWMWVSPDGTLRNVRWQSPEPRRSDVGGLMPVLPTVGTADTRAFVAMLDRPLFSVSRRPP PPPPPPSASEPPPDNLSSARLSGVYSGGGEGGVIIQVAGKQHRLRMNDNIDGWVLKSIQDRVVSFSRGGETRTLLLPRAA VTVYSGAPLPSPGSNVGQPPVAPPSAGAANSPRRAVFGGSRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21553; Mature: 21553
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYSLHLLLCVNAALALVLLWMWVSPDGTLRNVRWQSPEPRRSDVGGLMPVLPTVGTAD CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCH TRAFVAMLDRPLFSVSRRPPPPPPPPSASEPPPDNLSSARLSGVYSGGGEGGVIIQVAGK HHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCEEEEECCC QHRLRMNDNIDGWVLKSIQDRVVSFSRGGETRTLLLPRAAVTVYSGAPLPSPGSNVGQPP CEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCC VAPPSAGAANSPRRAVFGGSRAR CCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MKRYSLHLLLCVNAALALVLLWMWVSPDGTLRNVRWQSPEPRRSDVGGLMPVLPTVGTAD CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCH TRAFVAMLDRPLFSVSRRPPPPPPPPSASEPPPDNLSSARLSGVYSGGGEGGVIIQVAGK HHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCEEEEECCC QHRLRMNDNIDGWVLKSIQDRVVSFSRGGETRTLLLPRAAVTVYSGAPLPSPGSNVGQPP CEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCC VAPPSAGAANSPRRAVFGGSRAR CCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA