Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612770
Identifier: 120612770
GI number: 120612770
Start: 4584098
End: 4584388
Strand: Direct
Name: 120612770
Synonym: Aave_4133
Alternate gene names: NA
Gene position: 4584098-4584388 (Clockwise)
Preceding gene: 120612769
Following gene: 120612771
Centisome position: 85.64
GC content: 62.54
Gene sequence:
>291_bases GTGTCTGAGGTGGTCGACATCTTTTTCCGCTGGACCGGCATCACGTTCTGGTGCATGGCGGTGGGCCTGCCTTCGTTGGC GTTTCTCCACGCGCTTGCCGACCTGGTCGACTACCTGCGCTGGCTGCGCCACATCCACGGCCCTGAGCGAGCGAGCTGGC GTGCACTCGCGGGCATTGGCTGGCGCAGTCGCAGCGACTTCCTGCCCTTCGGGCGTTCGTTCACTTCCACATCCATCGGA CGTTTTTCCTGGCATGGCCTGCGCGACTGGCGCGAAGAAAGGACTTTTTAA
Upstream 100 bases:
>100_bases GTCGCTGATTTGAAGTTCCTGCCGGTCGCGCAGGCGTCCACGGTGATCGAAGCGCTCAAGGCCTGGCTGGACCGCGCCAA GCGCGCACAGGGAGCCCCCC
Downstream 100 bases:
>100_bases ATGATCCACACAACGACCACCGCCGCGGCAGCGGCACCCCGATCAGAAGCTCTGCGTTGCGCCGAATGGTTGGAACATAT CGCCCTGGGAGGCAACGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSEVVDIFFRWTGITFWCMAVGLPSLAFLHALADLVDYLRWLRHIHGPERASWRALAGIGWRSRSDFLPFGRSFTSTSIG RFSWHGLRDWREERTF
Sequences:
>Translated_96_residues MSEVVDIFFRWTGITFWCMAVGLPSLAFLHALADLVDYLRWLRHIHGPERASWRALAGIGWRSRSDFLPFGRSFTSTSIG RFSWHGLRDWREERTF >Mature_95_residues SEVVDIFFRWTGITFWCMAVGLPSLAFLHALADLVDYLRWLRHIHGPERASWRALAGIGWRSRSDFLPFGRSFTSTSIGR FSWHGLRDWREERTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11318; Mature: 11187
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVVDIFFRWTGITFWCMAVGLPSLAFLHALADLVDYLRWLRHIHGPERASWRALAGIG CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC WRSRSDFLPFGRSFTSTSIGRFSWHGLRDWREERTF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SEVVDIFFRWTGITFWCMAVGLPSLAFLHALADLVDYLRWLRHIHGPERASWRALAGIG CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC WRSRSDFLPFGRSFTSTSIGRFSWHGLRDWREERTF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA